Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is yiaL [C]
Identifier: 187736298
GI number: 187736298
Start: 2197642
End: 2198094
Strand: Direct
Name: yiaL [C]
Synonym: Amuc_1811
Alternate gene names: 187736298
Gene position: 2197642-2198094 (Clockwise)
Preceding gene: 187736296
Following gene: 187736301
Centisome position: 82.49
GC content: 53.42
Gene sequence:
>453_bases ATGATGATTATTGCCTCCCTTTCCGATTCCGCCCGTTACGAAATGTTGAATTCCCTGTTCAGGAGAGCTTTCGATTTTAT CAGGGAGATTGCTCCGGCAACCCTGGAAACCGGCCGCCATGTCCTGGAGGAAGACGCCCTGACCGTGATGGTGAATGAAC CGGTGATGAAGAAGCGGGAGAACGCCCGCATGGAAGTGCATGACCGGTTTATTGACATTCACGTGCCCCTTTCCCGGGAA GAGGGATTCATGTGGAAAGAGCGCGCGGCGCTGGAAAAGCCTTCCGAACCGTTCAACAGGGAAAAGGACGCGCAGCATTA TGATGATGCTCCGGACACCTCTTTTGTCGTGAAACCGGGGCAGTTCGCCATTTTTTTCCCGGAGGATGCGCATGCCGGCT GCATTGGGGAAGGAAAGATTCTGAAACTGGTGATTAAAGTCAGAACGGCCTGA
Upstream 100 bases:
>100_bases ATCGGGCTGTGCGTCGGAATATCGGGGGAAGGGGGGCAAATGAGTTGACTGGCTTTTCCTCCCCGTTACAATGAAGCCCG CTCCGGGGACGGAGCCTGTA
Downstream 100 bases:
>100_bases ACCTCATTCCGGAAAAACAGTCCGGAATGGAGAACAGGCCGTTTCTTCAATTTGCGGGCGGGAGTTGCGTTATTTTCCGT CTTCCTTCCGGGCGTCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MMIIASLSDSARYEMLNSLFRRAFDFIREIAPATLETGRHVLEEDALTVMVNEPVMKKRENARMEVHDRFIDIHVPLSRE EGFMWKERAALEKPSEPFNREKDAQHYDDAPDTSFVVKPGQFAIFFPEDAHAGCIGEGKILKLVIKVRTA
Sequences:
>Translated_150_residues MMIIASLSDSARYEMLNSLFRRAFDFIREIAPATLETGRHVLEEDALTVMVNEPVMKKRENARMEVHDRFIDIHVPLSRE EGFMWKERAALEKPSEPFNREKDAQHYDDAPDTSFVVKPGQFAIFFPEDAHAGCIGEGKILKLVIKVRTA >Mature_150_residues MMIIASLSDSARYEMLNSLFRRAFDFIREIAPATLETGRHVLEEDALTVMVNEPVMKKRENARMEVHDRFIDIHVPLSRE EGFMWKERAALEKPSEPFNREKDAQHYDDAPDTSFVVKPGQFAIFFPEDAHAGCIGEGKILKLVIKVRTA
Specific function: Unknown
COG id: COG2731
COG function: function code G; Beta-galactosidase, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17222; Mature: 17222
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIIASLSDSARYEMLNSLFRRAFDFIREIAPATLETGRHVLEEDALTVMVNEPVMKKRE CEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCHHHHHH NARMEVHDRFIDIHVPLSREEGFMWKERAALEKPSEPFNREKDAQHYDDAPDTSFVVKPG CCCEEEEEEEEEEEECCCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCC QFAIFFPEDAHAGCIGEGKILKLVIKVRTA CEEEEECCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MMIIASLSDSARYEMLNSLFRRAFDFIREIAPATLETGRHVLEEDALTVMVNEPVMKKRE CEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCHHHHHH NARMEVHDRFIDIHVPLSREEGFMWKERAALEKPSEPFNREKDAQHYDDAPDTSFVVKPG CCCEEEEEEEEEEEECCCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCC QFAIFFPEDAHAGCIGEGKILKLVIKVRTA CEEEEECCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA