Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is yiaL [C]

Identifier: 187736298

GI number: 187736298

Start: 2197642

End: 2198094

Strand: Direct

Name: yiaL [C]

Synonym: Amuc_1811

Alternate gene names: 187736298

Gene position: 2197642-2198094 (Clockwise)

Preceding gene: 187736296

Following gene: 187736301

Centisome position: 82.49

GC content: 53.42

Gene sequence:

>453_bases
ATGATGATTATTGCCTCCCTTTCCGATTCCGCCCGTTACGAAATGTTGAATTCCCTGTTCAGGAGAGCTTTCGATTTTAT
CAGGGAGATTGCTCCGGCAACCCTGGAAACCGGCCGCCATGTCCTGGAGGAAGACGCCCTGACCGTGATGGTGAATGAAC
CGGTGATGAAGAAGCGGGAGAACGCCCGCATGGAAGTGCATGACCGGTTTATTGACATTCACGTGCCCCTTTCCCGGGAA
GAGGGATTCATGTGGAAAGAGCGCGCGGCGCTGGAAAAGCCTTCCGAACCGTTCAACAGGGAAAAGGACGCGCAGCATTA
TGATGATGCTCCGGACACCTCTTTTGTCGTGAAACCGGGGCAGTTCGCCATTTTTTTCCCGGAGGATGCGCATGCCGGCT
GCATTGGGGAAGGAAAGATTCTGAAACTGGTGATTAAAGTCAGAACGGCCTGA

Upstream 100 bases:

>100_bases
ATCGGGCTGTGCGTCGGAATATCGGGGGAAGGGGGGCAAATGAGTTGACTGGCTTTTCCTCCCCGTTACAATGAAGCCCG
CTCCGGGGACGGAGCCTGTA

Downstream 100 bases:

>100_bases
ACCTCATTCCGGAAAAACAGTCCGGAATGGAGAACAGGCCGTTTCTTCAATTTGCGGGCGGGAGTTGCGTTATTTTCCGT
CTTCCTTCCGGGCGTCCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MMIIASLSDSARYEMLNSLFRRAFDFIREIAPATLETGRHVLEEDALTVMVNEPVMKKRENARMEVHDRFIDIHVPLSRE
EGFMWKERAALEKPSEPFNREKDAQHYDDAPDTSFVVKPGQFAIFFPEDAHAGCIGEGKILKLVIKVRTA

Sequences:

>Translated_150_residues
MMIIASLSDSARYEMLNSLFRRAFDFIREIAPATLETGRHVLEEDALTVMVNEPVMKKRENARMEVHDRFIDIHVPLSRE
EGFMWKERAALEKPSEPFNREKDAQHYDDAPDTSFVVKPGQFAIFFPEDAHAGCIGEGKILKLVIKVRTA
>Mature_150_residues
MMIIASLSDSARYEMLNSLFRRAFDFIREIAPATLETGRHVLEEDALTVMVNEPVMKKRENARMEVHDRFIDIHVPLSRE
EGFMWKERAALEKPSEPFNREKDAQHYDDAPDTSFVVKPGQFAIFFPEDAHAGCIGEGKILKLVIKVRTA

Specific function: Unknown

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17222; Mature: 17222

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIIASLSDSARYEMLNSLFRRAFDFIREIAPATLETGRHVLEEDALTVMVNEPVMKKRE
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCHHHHHH
NARMEVHDRFIDIHVPLSREEGFMWKERAALEKPSEPFNREKDAQHYDDAPDTSFVVKPG
CCCEEEEEEEEEEEECCCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCC
QFAIFFPEDAHAGCIGEGKILKLVIKVRTA
CEEEEECCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MMIIASLSDSARYEMLNSLFRRAFDFIREIAPATLETGRHVLEEDALTVMVNEPVMKKRE
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCHHHHHH
NARMEVHDRFIDIHVPLSREEGFMWKERAALEKPSEPFNREKDAQHYDDAPDTSFVVKPG
CCCEEEEEEEEEEEECCCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCC
QFAIFFPEDAHAGCIGEGKILKLVIKVRTA
CEEEEECCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA