Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736292
Identifier: 187736292
GI number: 187736292
Start: 2192485
End: 2192946
Strand: Direct
Name: 187736292
Synonym: Amuc_1805
Alternate gene names: NA
Gene position: 2192485-2192946 (Clockwise)
Preceding gene: 187736291
Following gene: 187736293
Centisome position: 82.3
GC content: 44.37
Gene sequence:
>462_bases ATGAAACGAACCATCGCGGGAATGGCTTTTTCCCTTGCCTGTCTGATGAACCTTTCAGAAGCCCAAACCATAAATCACGA TAAAGTGGAAATGGAGAATGGCAAAAATACGGGCATGTGCGTCAAGTTACCGATGCAGCCTGATGGTATCGTCCGTCTCT CAAAAATAGAAGTGCATGCTGAATATTTGGAGGAATATGTGAAGTACGCCATCGAAGTGGGGGAAATCTCCCTGCGCACG GAACCGGGCGTGTTGACCATGTACGCTGTTGCTGAAAAGGACAATGCTTGCAGAATTACGATTCTTGAAACTTACGCCAG CCAAAAGGCATATAAGTCGCACATCGCATCGGCTCATTTTCAGAAATACAAGCAGGAAACGTTGCACATGGTTAAGGCAT TGGTTTTATCCGACCAGACGCCACTGAATCCTTCAAACAGTATTACTAATATTATTAAATAA
Upstream 100 bases:
>100_bases CTCAAGGGAGGCGCTTTTGCCGGGGAAGGAATCCGGACGACGAGGGCCGCGCTTGTCAAGTGGGTCAATGAGACGATTTC CATCAATAAATAATGATCTT
Downstream 100 bases:
>100_bases TACAATAATGAATAAGATTATTTTATTTCTTTCAATTAGTTTTTTCATAACAAATGCTATGGCGCAGGAAAAGATAGTAC AGACGGCGGGACGCACTCAG
Product: Antibiotic biosynthesis monooxygenase
Products: NA
Alternate protein names: Flavoredoxin; Antibiotic Biosynthesis Monooxygenase Family Protein; Antibiotic Biosynthesis Monooxygenase Protein; Carboxymuconolactone Decarboxylase
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKRTIAGMAFSLACLMNLSEAQTINHDKVEMENGKNTGMCVKLPMQPDGIVRLSKIEVHAEYLEEYVKYAIEVGEISLRT EPGVLTMYAVAEKDNACRITILETYASQKAYKSHIASAHFQKYKQETLHMVKALVLSDQTPLNPSNSITNIIK
Sequences:
>Translated_153_residues MKRTIAGMAFSLACLMNLSEAQTINHDKVEMENGKNTGMCVKLPMQPDGIVRLSKIEVHAEYLEEYVKYAIEVGEISLRT EPGVLTMYAVAEKDNACRITILETYASQKAYKSHIASAHFQKYKQETLHMVKALVLSDQTPLNPSNSITNIIK >Mature_153_residues MKRTIAGMAFSLACLMNLSEAQTINHDKVEMENGKNTGMCVKLPMQPDGIVRLSKIEVHAEYLEEYVKYAIEVGEISLRT EPGVLTMYAVAEKDNACRITILETYASQKAYKSHIASAHFQKYKQETLHMVKALVLSDQTPLNPSNSITNIIK
Specific function: Unknown
COG id: COG1359
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17136; Mature: 17136
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTIAGMAFSLACLMNLSEAQTINHDKVEMENGKNTGMCVKLPMQPDGIVRLSKIEVHA CCCCHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCCCCEEEECCCCCCCEEEEHHHHHHH EYLEEYVKYAIEVGEISLRTEPGVLTMYAVAEKDNACRITILETYASQKAYKSHIASAHF HHHHHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHH QKYKQETLHMVKALVLSDQTPLNPSNSITNIIK HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCC >Mature Secondary Structure MKRTIAGMAFSLACLMNLSEAQTINHDKVEMENGKNTGMCVKLPMQPDGIVRLSKIEVHA CCCCHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCCCCEEEECCCCCCCEEEEHHHHHHH EYLEEYVKYAIEVGEISLRTEPGVLTMYAVAEKDNACRITILETYASQKAYKSHIASAHF HHHHHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHH QKYKQETLHMVKALVLSDQTPLNPSNSITNIIK HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA