Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736293

Identifier: 187736293

GI number: 187736293

Start: 2193005

End: 2193772

Strand: Direct

Name: 187736293

Synonym: Amuc_1806

Alternate gene names: NA

Gene position: 2193005-2193772 (Clockwise)

Preceding gene: 187736292

Following gene: 187736294

Centisome position: 82.32

GC content: 51.69

Gene sequence:

>768_bases
ATGGCGCAGGAAAAGATAGTACAGACGGCGGGACGCACTCAGTTAGGAGAGTTTGCTCCCAAATTTGCGGAACTTAACGA
TGATGTCCTTTTCGGTGAAGTATGGAGCCGGACTGACAAGCTCGGTCTGCGTGATCGCAGTTTGGTAACCATCACCTCCC
TCATTAGTCAGGGCATTACCGACAATTCGCTCGTTTTCCATCTTCAGTCGGCAAAGAAGAATGGAGTTACCCGTACCGAG
ATTGCAGAAATCATCACCCACATCGGTTTTTATGCCGGTTGGCCGAAAGCATGGGCGGCATTTAATCTGGCCAAAGACGT
ATGGGCGGAAGATGCGGCTGGCGAAGATGCCAAAGCCGCTTTCCAACGCGAGATGATTTTCCCTTTAGGCGAGCCGAATA
CGGCATATGCCAAGTATTTCACAGGCAACAGTTATCTTGCACCCGTTTCACGCGAACAGGTGAATATCTCCAATGTAACT
TTTGAACCCCGTTGCCGCAATAACTGGCATATTCACAAAGCGACGAAAGGCGGCGGGCAGATGCTTATCGGTGTGGCCGG
ACGCGGCTGGTATCAGGAAGAAGGAAAGCCTGCTGTGGAAATTCTTCCTGGCACAATCATCCATATTCCCGCCAACGTGA
AGCACTGGCACGGGGCTGCCTCCGACAGCTGGTTCTCCCACTTGGCTATTGAGGTTCCCGGTGAGAATGCATCCAGTGAA
TGGCTTGAGCCGGTAACGGATGAAGAGTATGCCAAGGCCGTGAAATAA

Upstream 100 bases:

>100_bases
CCACTGAATCCTTCAAACAGTATTACTAATATTATTAAATAATACAATAATGAATAAGATTATTTTATTTCTTTCAATTA
GTTTTTTCATAACAAATGCT

Downstream 100 bases:

>100_bases
TGTGGATACTTCCATGTGAAACAATTATAGTGCAATCTGTTGTGTTGGTAATGTAACTGTTTGATACAAATGTAATTAAG
AATTTGTTAGATCTGTCGCT

Product: Carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Domain-Containing Protein; 4-Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase Family Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain Protein; Transcriptional Regulator; Double-Stranded Beta-Helix-Like Protein; Cupin 2 Barrel; Cupin Family Protein; Gamma-Carboxymuconolactone Decarboxylase Subunit; 4-Carboxymuconolactone Decarboxylase Protein; Cupin 2 Barrel Domain-Containing Protein; Cupin Region; Cupin Domain-Containing Protein; RmlC-Type Cupin; Carboxymuconolactone Decarboxylase Protein; Exported RmlC-Type Cupin; Gamma-Carboxymuconolactone Decarboxylase; Decarboxylase; Conserved Protein; LOW QUALITY PROTEIN Cupin Domain-Containing Protein; ABC-2 Type Transporter; LOW QUALITY PROTEIN Carboxymuconolactone Decarboxylase; Double-Stranded Beta-Helix Protein; Secreted Protein

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MAQEKIVQTAGRTQLGEFAPKFAELNDDVLFGEVWSRTDKLGLRDRSLVTITSLISQGITDNSLVFHLQSAKKNGVTRTE
IAEIITHIGFYAGWPKAWAAFNLAKDVWAEDAAGEDAKAAFQREMIFPLGEPNTAYAKYFTGNSYLAPVSREQVNISNVT
FEPRCRNNWHIHKATKGGGQMLIGVAGRGWYQEEGKPAVEILPGTIIHIPANVKHWHGAASDSWFSHLAIEVPGENASSE
WLEPVTDEEYAKAVK

Sequences:

>Translated_255_residues
MAQEKIVQTAGRTQLGEFAPKFAELNDDVLFGEVWSRTDKLGLRDRSLVTITSLISQGITDNSLVFHLQSAKKNGVTRTE
IAEIITHIGFYAGWPKAWAAFNLAKDVWAEDAAGEDAKAAFQREMIFPLGEPNTAYAKYFTGNSYLAPVSREQVNISNVT
FEPRCRNNWHIHKATKGGGQMLIGVAGRGWYQEEGKPAVEILPGTIIHIPANVKHWHGAASDSWFSHLAIEVPGENASSE
WLEPVTDEEYAKAVK
>Mature_254_residues
AQEKIVQTAGRTQLGEFAPKFAELNDDVLFGEVWSRTDKLGLRDRSLVTITSLISQGITDNSLVFHLQSAKKNGVTRTEI
AEIITHIGFYAGWPKAWAAFNLAKDVWAEDAAGEDAKAAFQREMIFPLGEPNTAYAKYFTGNSYLAPVSREQVNISNVTF
EPRCRNNWHIHKATKGGGQMLIGVAGRGWYQEEGKPAVEILPGTIIHIPANVKHWHGAASDSWFSHLAIEVPGENASSEW
LEPVTDEEYAKAVK

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28210; Mature: 28079

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQEKIVQTAGRTQLGEFAPKFAELNDDVLFGEVWSRTDKLGLRDRSLVTITSLISQGIT
CCHHHHHHHCCCCHHHHHCHHHHCCCCCEEEHHHHCCHHHCCCCCCHHHHHHHHHHCCCC
DNSLVFHLQSAKKNGVTRTEIAEIITHIGFYAGWPKAWAAFNLAKDVWAEDAAGEDAKAA
CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
FQREMIFPLGEPNTAYAKYFTGNSYLAPVSREQVNISNVTFEPRCRNNWHIHKATKGGGQ
HHHHHCCCCCCCCCEEEEEEECCCEECCCCCCEEEECCEEECCCCCCCCEEEEECCCCCE
MLIGVAGRGWYQEEGKPAVEILPGTIIHIPANVKHWHGAASDSWFSHLAIEVPGENASSE
EEEEECCCCEECCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHH
WLEPVTDEEYAKAVK
HCCCCCCHHHHHHCC
>Mature Secondary Structure 
AQEKIVQTAGRTQLGEFAPKFAELNDDVLFGEVWSRTDKLGLRDRSLVTITSLISQGIT
CHHHHHHHCCCCHHHHHCHHHHCCCCCEEEHHHHCCHHHCCCCCCHHHHHHHHHHCCCC
DNSLVFHLQSAKKNGVTRTEIAEIITHIGFYAGWPKAWAAFNLAKDVWAEDAAGEDAKAA
CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
FQREMIFPLGEPNTAYAKYFTGNSYLAPVSREQVNISNVTFEPRCRNNWHIHKATKGGGQ
HHHHHCCCCCCCCCEEEEEEECCCEECCCCCCEEEECCEEECCCCCCCCEEEEECCCCCE
MLIGVAGRGWYQEEGKPAVEILPGTIIHIPANVKHWHGAASDSWFSHLAIEVPGENASSE
EEEEECCCCEECCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHH
WLEPVTDEEYAKAVK
HCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA