Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736291
Identifier: 187736291
GI number: 187736291
Start: 2191941
End: 2192477
Strand: Direct
Name: 187736291
Synonym: Amuc_1804
Alternate gene names: NA
Gene position: 2191941-2192477 (Clockwise)
Preceding gene: 187736290
Following gene: 187736292
Centisome position: 82.28
GC content: 56.98
Gene sequence:
>537_bases ATGACAGGAGCCGGATGTTTGGGACAGGAACAACCCAAGGTTTCCGCGGAACCTTCCAGGGTCCTCATTGCCTATTATTC ATGGGGAGGCAATACGAAGTACGCCGCTGCGCAAATTCAGAGGGCGACGGGAGGAACGCTGTTTGAAATCAAGCCGGTCA AGCCCTATCCCTCCGAATACCGGGAATGCACCGTGCAGGCCAGGAAGGAGATTCAGGAAGGGGTTCGGCCGGAACTGGCC GCCAAAGTGGAGGATATGGGCAAGTATGATGTGATTTTCATCGGCAGCCCCAACTGGTGGAGTACCATTGCGCCTCCGGT CGCGTCTTTCCTGGCAAGTTACGACCTTTCCGGCAAGACGGTGATTCCATTTGTGACGCATGGGGGCGGCGGCATGGCGC GCTGTGCGGACGAGGTTCGGAAGCTGTGTCCCAAGTCCACCGTTCTCAAGGGAGGCGCTTTTGCCGGGGAAGGAATCCGG ACGACGAGGGCCGCGCTTGTCAAGTGGGTCAATGAGACGATTTCCATCAATAAATAA
Upstream 100 bases:
>100_bases GGATGAAACCGTTTTTTCCGGACGCCTTTTGCCTCTCCTTTTAACCGGATAAAAATACATGAAAACAATATCAATGATAT GCACGCTGGCCGCGGCCCTG
Downstream 100 bases:
>100_bases TGATCTTATGAAACGAACCATCGCGGGAATGGCTTTTTCCCTTGCCTGTCTGATGAACCTTTCAGAAGCCCAAACCATAA ATCACGATAAAGTGGAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Flavodoxin Protein; Exported; Phosphoribosylamine-Glycine Ligase; Flavodoxin Family Protein; Aldo/Keto Reductase; Carboxymuconolactone Decarboxylase; Lipoprotein
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTGAGCLGQEQPKVSAEPSRVLIAYYSWGGNTKYAAAQIQRATGGTLFEIKPVKPYPSEYRECTVQARKEIQEGVRPELA AKVEDMGKYDVIFIGSPNWWSTIAPPVASFLASYDLSGKTVIPFVTHGGGGMARCADEVRKLCPKSTVLKGGAFAGEGIR TTRAALVKWVNETISINK
Sequences:
>Translated_178_residues MTGAGCLGQEQPKVSAEPSRVLIAYYSWGGNTKYAAAQIQRATGGTLFEIKPVKPYPSEYRECTVQARKEIQEGVRPELA AKVEDMGKYDVIFIGSPNWWSTIAPPVASFLASYDLSGKTVIPFVTHGGGGMARCADEVRKLCPKSTVLKGGAFAGEGIR TTRAALVKWVNETISINK >Mature_177_residues TGAGCLGQEQPKVSAEPSRVLIAYYSWGGNTKYAAAQIQRATGGTLFEIKPVKPYPSEYRECTVQARKEIQEGVRPELAA KVEDMGKYDVIFIGSPNWWSTIAPPVASFLASYDLSGKTVIPFVTHGGGGMARCADEVRKLCPKSTVLKGGAFAGEGIRT TRAALVKWVNETISINK
Specific function: Unknown
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19216; Mature: 19085
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGAGCLGQEQPKVSAEPSRVLIAYYSWGGNTKYAAAQIQRATGGTLFEIKPVKPYPSEY CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHH RECTVQARKEIQEGVRPELAAKVEDMGKYDVIFIGSPNWWSTIAPPVASFLASYDLSGKT HHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCE VIPFVTHGGGGMARCADEVRKLCPKSTVLKGGAFAGEGIRTTRAALVKWVNETISINK EEEEEEECCCCHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TGAGCLGQEQPKVSAEPSRVLIAYYSWGGNTKYAAAQIQRATGGTLFEIKPVKPYPSEY CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHH RECTVQARKEIQEGVRPELAAKVEDMGKYDVIFIGSPNWWSTIAPPVASFLASYDLSGKT HHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCE VIPFVTHGGGGMARCADEVRKLCPKSTVLKGGAFAGEGIRTTRAALVKWVNETISINK EEEEEEECCCCHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA