Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is yeaC [H]
Identifier: 187736268
GI number: 187736268
Start: 2169362
End: 2170345
Strand: Reverse
Name: yeaC [H]
Synonym: Amuc_1781
Alternate gene names: 187736268
Gene position: 2170345-2169362 (Counterclockwise)
Preceding gene: 187736269
Following gene: 187736267
Centisome position: 81.47
GC content: 59.65
Gene sequence:
>984_bases ATGGACACCCGAGAATTCAACGAAATTATCGCCGCGAACTCATCGTGGATTTCTGCTCTCAGAACGGAAGTCGGCAAGGT GGTCATCGGCCAGCAGGCGCTCGTGGACAGATTAATCCTCAGTCTCCTCTGCAAGGGCCACGTCCTGCTGGAAGGCGTGC CCGGCCTTGCCAAGACGCTCTCCGTAAAAGCCATGGCGGGCACGCTGCATGCACAGTTTGCCCGCATCCAGTTTACGCCG GATCTTCTTCCGGCGGATTTGCTGGGCACAATGATCTATAATCCGGAAGAAAGGCAGTTCACAGCCAAAAAAGGCCCGAT CTTCGCCAATCTCATTTTGGCGGATGAAATCAACCGCGCCCCGGCCAAAGTGCAATCCGCCCTGCTGGAAGCCATGCAGG AACGCCAGGTAACCCTAGGTGAAACCACCTACCGCCTGCCGGACCCCTTCCTGGTGCTTGCCACGCAGAACCCGATTGAC CAGGAGGGCACTTACCAGCTCCCGGAAGCCCAGCTTGACCGTTTTCTCTTCAAGGTGCTGGTCACCTACCCCACGCGCGA AGAAGAACTCCAGGTGCTGGACCTCATGGCCAGCTCCGCCAAACCGCCGGAAACCTCCCCGGTCACCACGCCGGAACAGG TGGCGGCCTCCCGCGACCTGGTAAACCAGATTTATATTGACGACGCCGTGCGCGGCTACATCGTGGATCTGGTGCGCGCC ACCCGCTTCCCGGAAACGGTGGACGTGAAGTTGCGCGGTCTCATCCGCGCGGGGGCATCTCCCCGCGCTACCATCAACCT GGCTCTGGCGGCCCGCGCCAATGCCTTCATGCACCATCGTTCCTTCGTCACTCCACAGGATATCAAGGACCTGGCCCACG ATATCCTGCGCCACCGCATCCTGCTCTCTTATGAGGCTGAAGCGGAAAACATTTCCACGGACGACGTCATCGACCACATC CTGACGAAAGTCCCCGTGCCGTGA
Upstream 100 bases:
>100_bases CCGGGAAGACCTCCTGTTGAAAACCGGATTTGCCCTTGGGAAATAATAGGATTTTTTCAACGTAAGTGCCCGGCATACTG TCTCACCCGCTATCAGAATC
Downstream 100 bases:
>100_bases CAGCAGGAGGCGGACGCTTCCGCGCCCGCCCTTATCCTTCAGGCCCCAAGGGGCGCCTTGCCGGAACCTGATTGAACCCA AACAGGGAAAATCATTTCAT
Product: ATPase associated with various cellular activities AAA_3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MDTREFNEIIAANSSWISALRTEVGKVVIGQQALVDRLILSLLCKGHVLLEGVPGLAKTLSVKAMAGTLHAQFARIQFTP DLLPADLLGTMIYNPEERQFTAKKGPIFANLILADEINRAPAKVQSALLEAMQERQVTLGETTYRLPDPFLVLATQNPID QEGTYQLPEAQLDRFLFKVLVTYPTREEELQVLDLMASSAKPPETSPVTTPEQVAASRDLVNQIYIDDAVRGYIVDLVRA TRFPETVDVKLRGLIRAGASPRATINLALAARANAFMHHRSFVTPQDIKDLAHDILRHRILLSYEAEAENISTDDVIDHI LTKVPVP
Sequences:
>Translated_327_residues MDTREFNEIIAANSSWISALRTEVGKVVIGQQALVDRLILSLLCKGHVLLEGVPGLAKTLSVKAMAGTLHAQFARIQFTP DLLPADLLGTMIYNPEERQFTAKKGPIFANLILADEINRAPAKVQSALLEAMQERQVTLGETTYRLPDPFLVLATQNPID QEGTYQLPEAQLDRFLFKVLVTYPTREEELQVLDLMASSAKPPETSPVTTPEQVAASRDLVNQIYIDDAVRGYIVDLVRA TRFPETVDVKLRGLIRAGASPRATINLALAARANAFMHHRSFVTPQDIKDLAHDILRHRILLSYEAEAENISTDDVIDHI LTKVPVP >Mature_327_residues MDTREFNEIIAANSSWISALRTEVGKVVIGQQALVDRLILSLLCKGHVLLEGVPGLAKTLSVKAMAGTLHAQFARIQFTP DLLPADLLGTMIYNPEERQFTAKKGPIFANLILADEINRAPAKVQSALLEAMQERQVTLGETTYRLPDPFLVLATQNPID QEGTYQLPEAQLDRFLFKVLVTYPTREEELQVLDLMASSAKPPETSPVTTPEQVAASRDLVNQIYIDDAVRGYIVDLVRA TRFPETVDVKLRGLIRAGASPRATINLALAARANAFMHHRSFVTPQDIKDLAHDILRHRILLSYEAEAENISTDDVIDHI LTKVPVP
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 36233; Mature: 36233
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTREFNEIIAANSSWISALRTEVGKVVIGQQALVDRLILSLLCKGHVLLEGVPGLAKTL CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHH SVKAMAGTLHAQFARIQFTPDLLPADLLGTMIYNPEERQFTAKKGPIFANLILADEINRA HHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHCCCCHHCEECCCCCEEEEEEEHHHCCCC PAKVQSALLEAMQERQVTLGETTYRLPDPFLVLATQNPIDQEGTYQLPEAQLDRFLFKVL HHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH VTYPTREEELQVLDLMASSAKPPETSPVTTPEQVAASRDLVNQIYIDDAVRGYIVDLVRA HHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRFPETVDVKLRGLIRAGASPRATINLALAARANAFMHHRSFVTPQDIKDLAHDILRHRI HCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LLSYEAEAENISTDDVIDHILTKVPVP HEEECCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MDTREFNEIIAANSSWISALRTEVGKVVIGQQALVDRLILSLLCKGHVLLEGVPGLAKTL CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHH SVKAMAGTLHAQFARIQFTPDLLPADLLGTMIYNPEERQFTAKKGPIFANLILADEINRA HHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHCCCCHHCEECCCCCEEEEEEEHHHCCCC PAKVQSALLEAMQERQVTLGETTYRLPDPFLVLATQNPIDQEGTYQLPEAQLDRFLFKVL HHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH VTYPTREEELQVLDLMASSAKPPETSPVTTPEQVAASRDLVNQIYIDDAVRGYIVDLVRA HHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRFPETVDVKLRGLIRAGASPRATINLALAARANAFMHHRSFVTPQDIKDLAHDILRHRI HCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LLSYEAEAENISTDDVIDHILTKVPVP HEEECCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]