Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736267

Identifier: 187736267

GI number: 187736267

Start: 2168373

End: 2169263

Strand: Reverse

Name: 187736267

Synonym: Amuc_1780

Alternate gene names: NA

Gene position: 2169263-2168373 (Counterclockwise)

Preceding gene: 187736268

Following gene: 187736266

Centisome position: 81.43

GC content: 57.8

Gene sequence:

>891_bases
ATGGATAAAGCCTCAGACATTCTCAAGCGCGTACGCCGCATTGAACTGCGCGCCAGGCATCTGGCCACGGAAAACTTCGC
CGGGCAATACCAGTCCGGCTTCCGCGGACAGGGGCTGGACTTTGACGACTTCCGGGAATACATGCCGGGAGATGACCCCC
GCTTCATTGACTGGAAGGTAACGGCCAGGATGAACTCCCCTTTTGTCCGCCGTTTCCGGGAGGAACGGGAACAGGCCGTC
ATTCTGGCGGTGGACGTCAGCGGCTCCATGCACTACGCCTCCTCCGCGGCCCGCGTCTCCAAACTGGACTATGCGGCGGA
AGTAGCGGCAGTGCTCGCCTACAGCGCTGCCCAGAGCGGAGACAAATGCGGCCTCCTTATCTACGGGAACAGCCACTCCC
ATTACATCCCCCCGGCCAAGGGAGTCAAGCAGACCCTGCGCATCGTCCGCGAAATCGTAGCCAGTAAAAACGATGGAGCC
GACCAGAACATTTCCGATGTAGCCCGGCAACTTGTCCTTTCCCAGAAAAAAGCGGCCATGGTCATCATGATCAGTGACTT
TTGGGGTGAGAACAATAAAGCCGCCCTGGGGCAGCTCAACTTCAAGCATGACTTCATCCCCATCCGCATCGCAGACCCGA
TGGAACTGCATCTGCCGGATGCCGGACGCGTCATCCTGAAAGATCCGGAAACTGGCAAAAGCATGTTCCTGAACCTTTCC
CGTCAGGATGTCCGGGAAACCCACGCCAACGTCGTTCATCTGCACCGCGAGAAATGGACGCAGGATTTCCGCCGCCTGGG
CATTGACTTCCTGGACTTGCAGACCACAGACAACTTCATGCCTCCCCTCCGGGCCCTTTTTGCCAGAAGATCCCGTAAAT
TTTCACGCTAA

Upstream 100 bases:

>100_bases
GACAGCAGGAGGCGGACGCTTCCGCGCCCGCCCTTATCCTTCAGGCCCCAAGGGGCGCCTTGCCGGAACCTGATTGAACC
CAAACAGGGAAAATCATTTC

Downstream 100 bases:

>100_bases
TCCTCTTCTCTATCAGCCATGCCACCCCCCGCCACCTTTCAGCCCCCCCCCACGGCAATTCCGGAACCGCCGGCGTTTCC
CTCCCTGATGGAAACACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MDKASDILKRVRRIELRARHLATENFAGQYQSGFRGQGLDFDDFREYMPGDDPRFIDWKVTARMNSPFVRRFREEREQAV
ILAVDVSGSMHYASSAARVSKLDYAAEVAAVLAYSAAQSGDKCGLLIYGNSHSHYIPPAKGVKQTLRIVREIVASKNDGA
DQNISDVARQLVLSQKKAAMVIMISDFWGENNKAALGQLNFKHDFIPIRIADPMELHLPDAGRVILKDPETGKSMFLNLS
RQDVRETHANVVHLHREKWTQDFRRLGIDFLDLQTTDNFMPPLRALFARRSRKFSR

Sequences:

>Translated_296_residues
MDKASDILKRVRRIELRARHLATENFAGQYQSGFRGQGLDFDDFREYMPGDDPRFIDWKVTARMNSPFVRRFREEREQAV
ILAVDVSGSMHYASSAARVSKLDYAAEVAAVLAYSAAQSGDKCGLLIYGNSHSHYIPPAKGVKQTLRIVREIVASKNDGA
DQNISDVARQLVLSQKKAAMVIMISDFWGENNKAALGQLNFKHDFIPIRIADPMELHLPDAGRVILKDPETGKSMFLNLS
RQDVRETHANVVHLHREKWTQDFRRLGIDFLDLQTTDNFMPPLRALFARRSRKFSR
>Mature_296_residues
MDKASDILKRVRRIELRARHLATENFAGQYQSGFRGQGLDFDDFREYMPGDDPRFIDWKVTARMNSPFVRRFREEREQAV
ILAVDVSGSMHYASSAARVSKLDYAAEVAAVLAYSAAQSGDKCGLLIYGNSHSHYIPPAKGVKQTLRIVREIVASKNDGA
DQNISDVARQLVLSQKKAAMVIMISDFWGENNKAALGQLNFKHDFIPIRIADPMELHLPDAGRVILKDPETGKSMFLNLS
RQDVRETHANVVHLHREKWTQDFRRLGIDFLDLQTTDNFMPPLRALFARRSRKFSR

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.avium MAV169 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002881
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01882 DUF58 [H]

EC number: NA

Molecular weight: Translated: 33721; Mature: 33721

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKASDILKRVRRIELRARHLATENFAGQYQSGFRGQGLDFDDFREYMPGDDPRFIDWKV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEEE
TARMNSPFVRRFREEREQAVILAVDVSGSMHYASSAARVSKLDYAAEVAAVLAYSAAQSG
EEECCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DKCGLLIYGNSHSHYIPPAKGVKQTLRIVREIVASKNDGADQNISDVARQLVLSQKKAAM
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEE
VIMISDFWGENNKAALGQLNFKHDFIPIRIADPMELHLPDAGRVILKDPETGKSMFLNLS
EEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCEEECCCCCEEEEECCCCCCHHEEECC
RQDVRETHANVVHLHREKWTQDFRRLGIDFLDLQTTDNFMPPLRALFARRSRKFSR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDKASDILKRVRRIELRARHLATENFAGQYQSGFRGQGLDFDDFREYMPGDDPRFIDWKV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEEE
TARMNSPFVRRFREEREQAVILAVDVSGSMHYASSAARVSKLDYAAEVAAVLAYSAAQSG
EEECCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DKCGLLIYGNSHSHYIPPAKGVKQTLRIVREIVASKNDGADQNISDVARQLVLSQKKAAM
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEE
VIMISDFWGENNKAALGQLNFKHDFIPIRIADPMELHLPDAGRVILKDPETGKSMFLNLS
EEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCEEECCCCCEEEEECCCCCCHHEEECC
RQDVRETHANVVHLHREKWTQDFRRLGIDFLDLQTTDNFMPPLRALFARRSRKFSR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]