Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736235
Identifier: 187736235
GI number: 187736235
Start: 2128217
End: 2129266
Strand: Reverse
Name: 187736235
Synonym: Amuc_1748
Alternate gene names: NA
Gene position: 2129266-2128217 (Counterclockwise)
Preceding gene: 187736236
Following gene: 187736232
Centisome position: 79.92
GC content: 49.81
Gene sequence:
>1050_bases ATGAATACAATTTCCACTCCTGTCATAGGCATTTGCGGCGGCGGCAACCTGGCCCATGCCATGGCGGGATGGCTGGGTAC ACGCGGCCTACATGTCAATATCCTAACCCGAAACCCTAATCAATGGGGAAAAAGTCTCTCCGCTATCTTTCCAAACGGTA CTACGCACCATGCTCCCCTAGGGCATATCAGCAACCATCCGGAAACATTGAAAGACTGCAACCTTGTGCTGGTGGCGGTT CCCCGCTTTGGCATTCGGGAGGTATGCCACCGCATTAAACCCTATCTGCATCGAGAACAGGGGCTCGTTATTGTACCCGG TACTCCGGAGGTCATGGAGATGGCAGAAGATCCCTCTTGGACTTCCACCGTCAGCCTGATGGGAATATACAAGGTTCCCC TGATTTGTCGGACGCAGGAATATGGACATTCCGTCTCCATTCTCGGAAGCCGCCCTCTTAACAGGATATGGGTAGCCCCA GGAAATAATGCCGAACATTGGTCCGCCATGTTGGAAACCTTATTTGACACTCCTCTGACTCATCTTTCTTCTCCCTGGCC CTTTCTGTTGACCAACTCCAACCCCCTTCTCCACCCTTCCCGCTGCATGAGTCTGTTTCGCCACTACAGGGAAGGAACGT TTTATGACAAGCAGTTTCTTTTTTATGAAGAATGGACGGAGGAGGCCAGTGAGTTGTACATCCAGGCAGATAGAGAACTT CTGACCCTCTGTTCCTGTTGTCCCGGCATGGAAATCGGAAAGGACATCATTCCCGTCCTAGATTATTATGAATCCAGAAA TGCCGTAGAGTTGACTAAAAAGATTCAATCTATTCCGGCATTCCATGGGGTTAAAGCTCCCATGACCCGCCGGAAACAAG GATGGATTCCCGATTTTTCTTCCCGTTACTTTACGGAAGATGTTCCTCTGGGCACCAAACCCATTTGCTATCTGGCGGAG CAATTAAACATTCCGGTTCCTACACTCCAGTCCTTTGTGGAATGGAACACCTCCATACTGAACAGATTCTCCCCATTTCG GAAGAAATAA
Upstream 100 bases:
>100_bases TGGTCCGGGCCATGCATGCAGAAACCGGCTCGGAACCGTCTTCTACTTGTCCCACTAACGGAGAATCCCCTTTTTCATCC TGTTCCACTTCAGCCTCCTG
Downstream 100 bases:
>100_bases TAGGATGGCTTCCATTCATGCGAAACAAAACGGTTCCAAGAAAAAGTTCCGTCGGCACTACCCCAGAATTCCACAGGTGT AAGAAGGCCTCTTCTTTCTA
Product: NAD/NADP octopine/nopaline dehydrogenase
Products: NA
Alternate protein names: NAD/NADP Octopine/Nopaline Dehydrogenase; Octopine Dehydrogenase; Octopine/Opine/Tauropine Dehydrogenase-Like Protein
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MNTISTPVIGICGGGNLAHAMAGWLGTRGLHVNILTRNPNQWGKSLSAIFPNGTTHHAPLGHISNHPETLKDCNLVLVAV PRFGIREVCHRIKPYLHREQGLVIVPGTPEVMEMAEDPSWTSTVSLMGIYKVPLICRTQEYGHSVSILGSRPLNRIWVAP GNNAEHWSAMLETLFDTPLTHLSSPWPFLLTNSNPLLHPSRCMSLFRHYREGTFYDKQFLFYEEWTEEASELYIQADREL LTLCSCCPGMEIGKDIIPVLDYYESRNAVELTKKIQSIPAFHGVKAPMTRRKQGWIPDFSSRYFTEDVPLGTKPICYLAE QLNIPVPTLQSFVEWNTSILNRFSPFRKK
Sequences:
>Translated_349_residues MNTISTPVIGICGGGNLAHAMAGWLGTRGLHVNILTRNPNQWGKSLSAIFPNGTTHHAPLGHISNHPETLKDCNLVLVAV PRFGIREVCHRIKPYLHREQGLVIVPGTPEVMEMAEDPSWTSTVSLMGIYKVPLICRTQEYGHSVSILGSRPLNRIWVAP GNNAEHWSAMLETLFDTPLTHLSSPWPFLLTNSNPLLHPSRCMSLFRHYREGTFYDKQFLFYEEWTEEASELYIQADREL LTLCSCCPGMEIGKDIIPVLDYYESRNAVELTKKIQSIPAFHGVKAPMTRRKQGWIPDFSSRYFTEDVPLGTKPICYLAE QLNIPVPTLQSFVEWNTSILNRFSPFRKK >Mature_349_residues MNTISTPVIGICGGGNLAHAMAGWLGTRGLHVNILTRNPNQWGKSLSAIFPNGTTHHAPLGHISNHPETLKDCNLVLVAV PRFGIREVCHRIKPYLHREQGLVIVPGTPEVMEMAEDPSWTSTVSLMGIYKVPLICRTQEYGHSVSILGSRPLNRIWVAP GNNAEHWSAMLETLFDTPLTHLSSPWPFLLTNSNPLLHPSRCMSLFRHYREGTFYDKQFLFYEEWTEEASELYIQADREL LTLCSCCPGMEIGKDIIPVLDYYESRNAVELTKKIQSIPAFHGVKAPMTRRKQGWIPDFSSRYFTEDVPLGTKPICYLAE QLNIPVPTLQSFVEWNTSILNRFSPFRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39514; Mature: 39514
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTISTPVIGICGGGNLAHAMAGWLGTRGLHVNILTRNPNQWGKSLSAIFPNGTTHHAPL CCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCHHHCCHHHHCCCCCCCCCCCC GHISNHPETLKDCNLVLVAVPRFGIREVCHRIKPYLHREQGLVIVPGTPEVMEMAEDPSW CCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCH TSTVSLMGIYKVPLICRTQEYGHSVSILGSRPLNRIWVAPGNNAEHWSAMLETLFDTPLT HHHHHHHHHHHCCEEEECHHHCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCHHH HLSSPWPFLLTNSNPLLHPSRCMSLFRHYREGTFYDKQFLFYEEWTEEASELYIQADREL HCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH LTLCSCCPGMEIGKDIIPVLDYYESRNAVELTKKIQSIPAFHGVKAPMTRRKQGWIPDFS HHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHCCCCCCHHHHHCCCCCCCC SRYFTEDVPLGTKPICYLAEQLNIPVPTLQSFVEWNTSILNRFSPFRKK CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure MNTISTPVIGICGGGNLAHAMAGWLGTRGLHVNILTRNPNQWGKSLSAIFPNGTTHHAPL CCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCHHHCCHHHHCCCCCCCCCCCC GHISNHPETLKDCNLVLVAVPRFGIREVCHRIKPYLHREQGLVIVPGTPEVMEMAEDPSW CCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCH TSTVSLMGIYKVPLICRTQEYGHSVSILGSRPLNRIWVAPGNNAEHWSAMLETLFDTPLT HHHHHHHHHHHCCEEEECHHHCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCHHH HLSSPWPFLLTNSNPLLHPSRCMSLFRHYREGTFYDKQFLFYEEWTEEASELYIQADREL HCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH LTLCSCCPGMEIGKDIIPVLDYYESRNAVELTKKIQSIPAFHGVKAPMTRRKQGWIPDFS HHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHCCCCCCHHHHHCCCCCCCC SRYFTEDVPLGTKPICYLAEQLNIPVPTLQSFVEWNTSILNRFSPFRKK CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA