Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736232
Identifier: 187736232
GI number: 187736232
Start: 2125584
End: 2125760
Strand: Reverse
Name: 187736232
Synonym: Amuc_1745
Alternate gene names: NA
Gene position: 2125760-2125584 (Counterclockwise)
Preceding gene: 187736235
Following gene: 187736229
Centisome position: 79.79
GC content: 42.37
Gene sequence:
>177_bases ATGATTATTAAATGCGGAAGAATCGTAGCACATACATTGATCTATACAATGCTTAATTACCCCGTGCTCAGCAGAAAGAA CCACTATGGCATCGCGCCTCCCCTGAAGAATATTTCCCAGCGCAAAATAAGGAAAAAGACTTATTCCTCCGTCACGCGCG GTTCTTTAAAGCAATGA
Upstream 100 bases:
>100_bases CGGTAGGGAAGATTGCAAAGCACCATATATTTTATATGGCTTATTTTACTCATATCCTGTTAGTTGAAAAATTAATCCGG TTCCAAGGAAACGGCAAAGC
Downstream 100 bases:
>100_bases AAAAATTCCGGATGGCCATCCCTTCACGGAAAGCCGCATTAAAACATAACCTTGTCCCGTGCGGAGCGGCCATAGGCCGT ATCGGGATATTTATCCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 58
Protein sequence:
>58_residues MIIKCGRIVAHTLIYTMLNYPVLSRKNHYGIAPPLKNISQRKIRKKTYSSVTRGSLKQ
Sequences:
>Translated_58_residues MIIKCGRIVAHTLIYTMLNYPVLSRKNHYGIAPPLKNISQRKIRKKTYSSVTRGSLKQ >Mature_58_residues MIIKCGRIVAHTLIYTMLNYPVLSRKNHYGIAPPLKNISQRKIRKKTYSSVTRGSLKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6687; Mature: 6687
Theoretical pI: Translated: 11.46; Mature: 11.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIKCGRIVAHTLIYTMLNYPVLSRKNHYGIAPPLKNISQRKIRKKTYSSVTRGSLKQ CEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIIKCGRIVAHTLIYTMLNYPVLSRKNHYGIAPPLKNISQRKIRKKTYSSVTRGSLKQ CEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA