Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is hisC [C]
Identifier: 187736236
GI number: 187736236
Start: 2129266
End: 2131158
Strand: Reverse
Name: hisC [C]
Synonym: Amuc_1749
Alternate gene names: 187736236
Gene position: 2131158-2129266 (Counterclockwise)
Preceding gene: 187736239
Following gene: 187736235
Centisome position: 80.0
GC content: 52.61
Gene sequence:
>1893_bases ATGCAGGCGATCATTTTAGCGGCCGGAATGGGAAAAAGACTGGGAGCGCTCACCCGGAACAATACCAAGTGCATGATCCA GGTCAACGGAGTGACGCTGATAGAACGCATGATGAGACAATTGGACCGCCTTTCCCCGTCTCTGGAAAAAATCGTGATTG TTACGGGTTATGAGGGGGAAAAACTCAAAACCTTCCTTTCCCAGCTGGACATTTCCACCCCTGTGGAATATGTGGACAAT CCCCTGTACGCCAGCACCAACAATATTTATTCCCTGTACCTGGCCAAGGAACACCTGCTTCAGGACGATACGCTGCTCTT TGAATCCGACCTGATTTTTGAAGACTCCGTTATTGATGCCCTGCTCCGCCATCCCTACCCCAGCCTTGCTCTCGTCGCCA AATTTGAAAGCTGGATGGACGGCACGGTCGTCACTCTGGATGAAGACGACAACATCAGGCAATTCATTCCCGGCAGCAAA TTCTCCTACAAGAAAAAGACGGAATATTTTAAAACAGTCAATATTTACAAATTCAGCAGGGAATTCTCCCGGACCCATTA CGTCCCCTTTCTTACAGCCTACAGCAAAGCCCTGGGCAATAATGAATATTACGAACAGGTGCTGCGGGTCATCGCCCTGC TGGACAAGCCGGAAATCAAGGCGCTGCGCCTCGGCGGCGAAGCATGGTATGAAATAGACGACATCCAGGATCTGGACATC GCAGCCTCCATATTCACCCCGGACAGGGAAGAACACCTGCGCCTGATGGAATCCCGGTACGGAGGCTACTGGCGCTATCC CCGCATCAGGGATTTCTGTTACCTGGTCAATCCCTATTTCCCCAACAAACGCCTCATGTCCGAACTCAAGGCGAATTTTG AACGCCTAGTGAGGGAATACCCGTCCGGAATGAGAGTCAACAGCCTGCTGGCGGCAAAATACTTCGGCATCAGCCAGGAA TACATCTGCATCGGCAACGGCGCGGCGGAACTCATTAAGGCGCTCATGTCCCGCCTGGAAGGGAAAATGGGGGTCATCTA CCCTACCTTTGAAGAATACCCCAACCGGGTGAAACCGGATATGGTGGTTCCCTTCCATACCGCTTCCCGGAATTTCACTT ATACGGCGGACGACCTGATGGAATTCTTTTCCGGGAAAGACATCGGTACCCTGCTCCTCGTCAATCCGGGAAACCCTTCC GGATTCTTCCTGCCGAAAGGCGATGTGCTACGCCTCTGCCTGTGGACAAAAACCCGCGGCATCCGCCTGATCGTGGATGA ATCCTTTGTAGACTTCTCCTGCGGAATGCCGGACAATACGCTGCTGAAAGACGGCATCCTGGAAGAATATCCCCACCTGG CCGTGGTAAAAAGCATTTCCAAATCCTACGGCGTTCCGGGCCTCCGCCTGGGTGTTCTGGCCTCCGCAGACAGGGAATTG GCGGCATGGATAAAAAAAGACGTTTCCATCTGGAACATCAATTCCATCGCGGAATTCTACATGCAAATCTTCGGGAAATA CGAGCAATCCTACGTGCGCGCGTGCAACCGTTTCATGAAGGAACGGGACCGCTTCATGCAGAAACTCTCCCGCGTGCCTT TCCTGAACGTTTTCCCCTCCCAGGCAAACTATTTCATGTGCGAGGTCAAGCCCCCCATGAAAGCCCGCTCCCTGACCGGC CTTCTGCTGAAAAACCACTCCATCCTTGTTAAGGACTGTAGCCGGAAAAAAGGATTTGAAGGCAGAGAATTCATCCGTAT CGCCGTCAGAGACGCAACCGACAATGATGCCCTGGTCCGGGCCATGCATGCAGAAACCGGCTCGGAACCGTCTTCTACTT GTCCCACTAACGGAGAATCCCCTTTTTCATCCTGTTCCACTTCAGCCTCCTGA
Upstream 100 bases:
>100_bases ACATATTCTTACAGAAATTTTTACTTTGACGGCGGATGCTCAATCCGTTAAACATAGTTCCCGGTTCTTTCTCAGGTTCT GAAGACAAATTAGAATACTT
Downstream 100 bases:
>100_bases TGAATACAATTTCCACTCCTGTCATAGGCATTTGCGGCGGCGGCAACCTGGCCCATGCCATGGCGGGATGGCTGGGTACA CGCGGCCTACATGTCAATAT
Product: aminotransferase class I and II
Products: 2-Oxoglutarate; L-Histidinol phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 630; Mature: 630
Protein sequence:
>630_residues MQAIILAAGMGKRLGALTRNNTKCMIQVNGVTLIERMMRQLDRLSPSLEKIVIVTGYEGEKLKTFLSQLDISTPVEYVDN PLYASTNNIYSLYLAKEHLLQDDTLLFESDLIFEDSVIDALLRHPYPSLALVAKFESWMDGTVVTLDEDDNIRQFIPGSK FSYKKKTEYFKTVNIYKFSREFSRTHYVPFLTAYSKALGNNEYYEQVLRVIALLDKPEIKALRLGGEAWYEIDDIQDLDI AASIFTPDREEHLRLMESRYGGYWRYPRIRDFCYLVNPYFPNKRLMSELKANFERLVREYPSGMRVNSLLAAKYFGISQE YICIGNGAAELIKALMSRLEGKMGVIYPTFEEYPNRVKPDMVVPFHTASRNFTYTADDLMEFFSGKDIGTLLLVNPGNPS GFFLPKGDVLRLCLWTKTRGIRLIVDESFVDFSCGMPDNTLLKDGILEEYPHLAVVKSISKSYGVPGLRLGVLASADREL AAWIKKDVSIWNINSIAEFYMQIFGKYEQSYVRACNRFMKERDRFMQKLSRVPFLNVFPSQANYFMCEVKPPMKARSLTG LLLKNHSILVKDCSRKKGFEGREFIRIAVRDATDNDALVRAMHAETGSEPSSTCPTNGESPFSSCSTSAS
Sequences:
>Translated_630_residues MQAIILAAGMGKRLGALTRNNTKCMIQVNGVTLIERMMRQLDRLSPSLEKIVIVTGYEGEKLKTFLSQLDISTPVEYVDN PLYASTNNIYSLYLAKEHLLQDDTLLFESDLIFEDSVIDALLRHPYPSLALVAKFESWMDGTVVTLDEDDNIRQFIPGSK FSYKKKTEYFKTVNIYKFSREFSRTHYVPFLTAYSKALGNNEYYEQVLRVIALLDKPEIKALRLGGEAWYEIDDIQDLDI AASIFTPDREEHLRLMESRYGGYWRYPRIRDFCYLVNPYFPNKRLMSELKANFERLVREYPSGMRVNSLLAAKYFGISQE YICIGNGAAELIKALMSRLEGKMGVIYPTFEEYPNRVKPDMVVPFHTASRNFTYTADDLMEFFSGKDIGTLLLVNPGNPS GFFLPKGDVLRLCLWTKTRGIRLIVDESFVDFSCGMPDNTLLKDGILEEYPHLAVVKSISKSYGVPGLRLGVLASADREL AAWIKKDVSIWNINSIAEFYMQIFGKYEQSYVRACNRFMKERDRFMQKLSRVPFLNVFPSQANYFMCEVKPPMKARSLTG LLLKNHSILVKDCSRKKGFEGREFIRIAVRDATDNDALVRAMHAETGSEPSSTCPTNGESPFSSCSTSAS >Mature_630_residues MQAIILAAGMGKRLGALTRNNTKCMIQVNGVTLIERMMRQLDRLSPSLEKIVIVTGYEGEKLKTFLSQLDISTPVEYVDN PLYASTNNIYSLYLAKEHLLQDDTLLFESDLIFEDSVIDALLRHPYPSLALVAKFESWMDGTVVTLDEDDNIRQFIPGSK FSYKKKTEYFKTVNIYKFSREFSRTHYVPFLTAYSKALGNNEYYEQVLRVIALLDKPEIKALRLGGEAWYEIDDIQDLDI AASIFTPDREEHLRLMESRYGGYWRYPRIRDFCYLVNPYFPNKRLMSELKANFERLVREYPSGMRVNSLLAAKYFGISQE YICIGNGAAELIKALMSRLEGKMGVIYPTFEEYPNRVKPDMVVPFHTASRNFTYTADDLMEFFSGKDIGTLLLVNPGNPS GFFLPKGDVLRLCLWTKTRGIRLIVDESFVDFSCGMPDNTLLKDGILEEYPHLAVVKSISKSYGVPGLRLGVLASADREL AAWIKKDVSIWNINSIAEFYMQIFGKYEQSYVRACNRFMKERDRFMQKLSRVPFLNVFPSQANYFMCEVKPPMKARSLTG LLLKNHSILVKDCSRKKGFEGREFIRIAVRDATDNDALVRAMHAETGSEPSSTCPTNGESPFSSCSTSAS
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To Rhizobium NGR234A y4qD [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=303, Percent_Identity=24.7524752475248, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6322075, Length=300, Percent_Identity=24, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: 2.6.1.9 [C]
Molecular weight: Translated: 71910; Mature: 71910
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAIILAAGMGKRLGALTRNNTKCMIQVNGVTLIERMMRQLDRLSPSLEKIVIVTGYEGE CCEEEEECCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCH KLKTFLSQLDISTPVEYVDNPLYASTNNIYSLYLAKEHLLQDDTLLFESDLIFEDSVIDA HHHHHHHHCCCCCCHHHHCCCCEECCCCEEEEEEEHHHHCCCCCEEEECCCEECHHHHHH LLRHPYPSLALVAKFESWMDGTVVTLDEDDNIRQFIPGSKFSYKKKTEYFKTVNIYKFSR HHHCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHHHEEEHEEHHH EFSRTHYVPFLTAYSKALGNNEYYEQVLRVIALLDKPEIKALRLGGEAWYEIDDIQDLDI HHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCE AASIFTPDREEHLRLMESRYGGYWRYPRIRDFCYLVNPYFPNKRLMSELKANFERLVREY EEEECCCCHHHHHHHHHHHCCCEECCCCHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHC PSGMRVNSLLAAKYFGISQEYICIGNGAAELIKALMSRLEGKMGVIYPTFEEYPNRVKPD CCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCC MVVPFHTASRNFTYTADDLMEFFSGKDIGTLLLVNPGNPSGFFLPKGDVLRLCLWTKTRG EEEEEECCCCCCEECHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCCEEEEEEEECCCC IRLIVDESFVDFSCGMPDNTLLKDGILEEYPHLAVVKSISKSYGVPGLRLGVLASADREL EEEEEECCCEEEECCCCCCCHHHCCHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCHHH AAWIKKDVSIWNINSIAEFYMQIFGKYEQSYVRACNRFMKERDRFMQKLSRVPFLNVFPS HHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC QANYFMCEVKPPMKARSLTGLLLKNHSILVKDCSRKKGFEGREFIRIAVRDATDNDALVR CCCEEEEECCCCCHHHHHHHHEECCCCEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHH AMHAETGSEPSSTCPTNGESPFSSCSTSAS HHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQAIILAAGMGKRLGALTRNNTKCMIQVNGVTLIERMMRQLDRLSPSLEKIVIVTGYEGE CCEEEEECCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCH KLKTFLSQLDISTPVEYVDNPLYASTNNIYSLYLAKEHLLQDDTLLFESDLIFEDSVIDA HHHHHHHHCCCCCCHHHHCCCCEECCCCEEEEEEEHHHHCCCCCEEEECCCEECHHHHHH LLRHPYPSLALVAKFESWMDGTVVTLDEDDNIRQFIPGSKFSYKKKTEYFKTVNIYKFSR HHHCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHHHEEEHEEHHH EFSRTHYVPFLTAYSKALGNNEYYEQVLRVIALLDKPEIKALRLGGEAWYEIDDIQDLDI HHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCE AASIFTPDREEHLRLMESRYGGYWRYPRIRDFCYLVNPYFPNKRLMSELKANFERLVREY EEEECCCCHHHHHHHHHHHCCCEECCCCHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHC PSGMRVNSLLAAKYFGISQEYICIGNGAAELIKALMSRLEGKMGVIYPTFEEYPNRVKPD CCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCC MVVPFHTASRNFTYTADDLMEFFSGKDIGTLLLVNPGNPSGFFLPKGDVLRLCLWTKTRG EEEEEECCCCCCEECHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCCEEEEEEEECCCC IRLIVDESFVDFSCGMPDNTLLKDGILEEYPHLAVVKSISKSYGVPGLRLGVLASADREL EEEEEECCCEEEECCCCCCCHHHCCHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCHHH AAWIKKDVSIWNINSIAEFYMQIFGKYEQSYVRACNRFMKERDRFMQKLSRVPFLNVFPS HHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC QANYFMCEVKPPMKARSLTGLLLKNHSILVKDCSRKKGFEGREFIRIAVRDATDNDALVR CCCEEEEECCCCCHHHHHHHHEECCCCEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHH AMHAETGSEPSSTCPTNGESPFSSCSTSAS HHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Pyridoxal Phosphate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-Glutamate; 3-(Imidazol-4-yl)-2-oxopropyl phosphate [C]
Specific reaction: L-Glutamate + 3-(Imidazol-4-yl)-2-oxopropyl phosphate --> 2-Oxoglutarate + L-Histidinol phosphate [C]
General reaction: Amino group transfer [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]