Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is tam [H]
Identifier: 187736229
GI number: 187736229
Start: 2123102
End: 2123845
Strand: Reverse
Name: tam [H]
Synonym: Amuc_1742
Alternate gene names: 187736229
Gene position: 2123845-2123102 (Counterclockwise)
Preceding gene: 187736232
Following gene: 187736228
Centisome position: 79.72
GC content: 57.39
Gene sequence:
>744_bases ATGGACTGGAACGCTGAATGGTACGAAAACAAACACGGTTTTGTCGCGGAATACGGCAGGGAACTGCTCTCCTGCGTACC GGAAAATCCAGACCAGTCCATTCTGGACCTGGGCTGCGGAACCGGTACGCTGACGCACGCTCTGCTGGAGAAATCGGCGT CCGTCACCGGCCTGGACTCCTCTCCGGAAATGATAGCAAAAGCCCGCCAGCTCTATCCCGGCATGGACTTCCGCGTGCTG GACGCCCGCCTCATGCCCTGGCGCAACAGATTTGACATCGTTTTCTCCAATGCGGCCCTCCATTGGATACCGGACCATGG GACTCTCTTAAATGCCGTTTCCCGCGTCCTGAAACCGCAGGGGAAACTGGTCTGCGAATTCGGAGCCCACCTCAATATTC TCCGCATCAGGGAAGCTTTTCGGACAGCCCTGGAACGCAGGAACCTCCCGTACACAACGCGTTTTTACTTTCCCGCCGCG GAAGAATACGGCAGCGTTCTGGAACAAGCCGGGCTCCGCCCGGAAACAATGAAGGAATTTGACCGCCCTACGCCGCTGAA AGGCGGTCCTGACGGCCTGCGCAACTGGGCGTGTCAATTCTTCCGGGAAGACTTGAACAACCTCCGCGAAGAACAGCGCA TCCAGATTTTCAAGGAAATGGAGGATTCCCTGAAAGATGAGTTATGGGACGGTTCCCAATGGGTGGCGGACTACCGGCGG ATCCGGGTGACGGCAGCCAGATAA
Upstream 100 bases:
>100_bases GCGCGGAGAAATGGACAGAGACCCTCCGGGAAAAATACCATGAAAAAAAGACAGGGTCTTTCTTGAAAAAAAACCCCTTT TTCCCTATGATGGAGAGGTA
Downstream 100 bases:
>100_bases CCCGGAGCAGTCCCCGCAAGAAAGAGAAAACGCGCGGGCATTCCGGATACGCTGATAATGCTTGAGCCTCCTCCGGGCAT TTTGTACAAAAGCCGCCAAT
Product: Methyltransferase type 11
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MDWNAEWYENKHGFVAEYGRELLSCVPENPDQSILDLGCGTGTLTHALLEKSASVTGLDSSPEMIAKARQLYPGMDFRVL DARLMPWRNRFDIVFSNAALHWIPDHGTLLNAVSRVLKPQGKLVCEFGAHLNILRIREAFRTALERRNLPYTTRFYFPAA EEYGSVLEQAGLRPETMKEFDRPTPLKGGPDGLRNWACQFFREDLNNLREEQRIQIFKEMEDSLKDELWDGSQWVADYRR IRVTAAR
Sequences:
>Translated_247_residues MDWNAEWYENKHGFVAEYGRELLSCVPENPDQSILDLGCGTGTLTHALLEKSASVTGLDSSPEMIAKARQLYPGMDFRVL DARLMPWRNRFDIVFSNAALHWIPDHGTLLNAVSRVLKPQGKLVCEFGAHLNILRIREAFRTALERRNLPYTTRFYFPAA EEYGSVLEQAGLRPETMKEFDRPTPLKGGPDGLRNWACQFFREDLNNLREEQRIQIFKEMEDSLKDELWDGSQWVADYRR IRVTAAR >Mature_247_residues MDWNAEWYENKHGFVAEYGRELLSCVPENPDQSILDLGCGTGTLTHALLEKSASVTGLDSSPEMIAKARQLYPGMDFRVL DARLMPWRNRFDIVFSNAALHWIPDHGTLLNAVSRVLKPQGKLVCEFGAHLNILRIREAFRTALERRNLPYTTRFYFPAA EEYGSVLEQAGLRPETMKEFDRPTPLKGGPDGLRNWACQFFREDLNNLREEQRIQIFKEMEDSLKDELWDGSQWVADYRR IRVTAAR
Specific function: Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. Tam family [H]
Homologues:
Organism=Escherichia coli, GI1787798, Length=177, Percent_Identity=36.1581920903955, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786994, Length=173, Percent_Identity=27.7456647398844, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR023149 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.144 [H]
Molecular weight: Translated: 28524; Mature: 28524
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWNAEWYENKHGFVAEYGRELLSCVPENPDQSILDLGCGTGTLTHALLEKSASVTGLDS CCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCC SPEMIAKARQLYPGMDFRVLDARLMPWRNRFDIVFSNAALHWIPDHGTLLNAVSRVLKPQ CHHHHHHHHHHCCCCCEEEHHHHHCCCCCCEEEEEECCEEEEECCCCHHHHHHHHHHCCC GKLVCEFGAHLNILRIREAFRTALERRNLPYTTRFYFPAAEEYGSVLEQAGLRPETMKEF CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHC DRPTPLKGGPDGLRNWACQFFREDLNNLREEQRIQIFKEMEDSLKDELWDGSQWVADYRR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH IRVTAAR HEEEECC >Mature Secondary Structure MDWNAEWYENKHGFVAEYGRELLSCVPENPDQSILDLGCGTGTLTHALLEKSASVTGLDS CCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCC SPEMIAKARQLYPGMDFRVLDARLMPWRNRFDIVFSNAALHWIPDHGTLLNAVSRVLKPQ CHHHHHHHHHHCCCCCEEEHHHHHCCCCCCEEEEEECCEEEEECCCCHHHHHHHHHHCCC GKLVCEFGAHLNILRIREAFRTALERRNLPYTTRFYFPAAEEYGSVLEQAGLRPETMKEF CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHC DRPTPLKGGPDGLRNWACQFFREDLNNLREEQRIQIFKEMEDSLKDELWDGSQWVADYRR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH IRVTAAR HEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA