Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736228
Identifier: 187736228
GI number: 187736228
Start: 2121618
End: 2123003
Strand: Reverse
Name: 187736228
Synonym: Amuc_1741
Alternate gene names: NA
Gene position: 2123003-2121618 (Counterclockwise)
Preceding gene: 187736229
Following gene: 187736227
Centisome position: 79.69
GC content: 61.62
Gene sequence:
>1386_bases ATGAGTACGTTCACTCCTTTTGCGGAAAAGATGGAGTCCGCCGGCGTTTCAGCCGCGGCCGTCAACGCTTTCTCCCGTTG TTATGAAGCCCTTGTTTCCAACCACTCCGGCATGATTCCGGAAACGGACATCCTGCCCGCCGACCAGGTGGAAGACTGGC AGGACATCACGGCCTCCACCCCCGCGGCGGACAAGGACCTGATTTCCCGTTGCGTATGCATCAAGCTCAACGGCGGCCTC GGCACGAGCATGGGCCTCCAGAAAGCGAAAAGCCTGCTGAAAGTAAAAGGAGAGGATACGTTCCTGGATTTGATCGTCAG GCAGGTGAAGCATCTGCGCTCCATCTCCGGCACGCCTGTGCGCCTTCTGCTGATGAACTCTTTCTCCACCAGCGCGGACA CGCTGGCCTACCTGGAAAAATACGCGGCGGACGGCTTTGCGGACCGCGCCGAAGTGGAGCTGCTGCAAAACCGCGTTCCC AAAATCCTGGCGGACGGCCTCTCCCCGGCCAGCTGCCCGGAACAGCCGGAGCTGGAATGGTGCCCGCCAGGCCATGGGGA CCTGTATCCGGCCCTGCTGGGGTCCGGCTGGCTGGACCGCCTGCTGGAGGATGGCGTTAAATACGCTTTTGTCTCCAATT CCGACAATCTGGGCGCCCAGCTTGACATGAACTTCCTCCGCTGGTTTGCGGAAAGCGGCGCCCCCTTCGTCATGGAAGTC ACCCGCCGCACGGTGGCGGACAGGAAAGGCGGCCACCTGGCTGTCAGGAAATCGGACGGCCAGTTGATTCTGCGGGAAGT GGCCCAGTGCCCGGATGAGGACATTCCTGAATTCCAGAACATTTCCAGGCACCGCTATTTCAACACCAATACGCTCTGGA TACGCCTGGACGCCCTCAAGGAAATTCTGGACGCCAACGGCGGCGTACTCCCGCTGCCCATGATCCGTAATAAAAAGACG CTCAACCCCCGCGATCCGGAATCCGCCCCGGTGTACCAGCTGGAAACGGCCATGGGCGCGGGCATCGAATGCTTCCCCGG CGCCAGGGCCGTCAACGTCCCGCGTTCCCGTTTCTTCCCCGTCAAAACCACTTCCGACCTGTTCCTGCTCCGTTCGGACG CCATCGCCGTGGATGAACACGGCAACGTGGCCCTGGCGCCGGAACGGCAGGGCAACACCCCGGTGGTGGACCTGGATTCC AAACTGTACAAGCTGGTGGATTCCCTGGACGGGCTGGGCCTGCCCTCCCTGATAGGCATGGACAAGCTGACCCTGCGCGG CCGCTTCCACTTCCAGGACGGAGCCGTTCTCCGGGGCACCTTGCTGATGGAAAACGACTCCGACGAAACGAAGGAAATCC TCCCGGGCGTCTATGCCGGAGCCTGA
Upstream 100 bases:
>100_bases AACCCGGAGCAGTCCCCGCAAGAAAGAGAAAACGCGCGGGCATTCCGGATACGCTGATAATGCTTGAGCCTCCTCCGGGC ATTTTGTACAAAAGCCGCCA
Downstream 100 bases:
>100_bases ACGCCATCTTCCCGCTTCCGCGCCCCGTCCGGTTCAGGCCGGTCTGGGCGTGGAGGACATCCGGCACATTCCCGTCCGGA AACGGGAGTTGCGCTTCACC
Product: UTP--glucose-1-phosphate uridylyltransferase
Products: diphosphate; UDP-glucose
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MSTFTPFAEKMESAGVSAAAVNAFSRCYEALVSNHSGMIPETDILPADQVEDWQDITASTPAADKDLISRCVCIKLNGGL GTSMGLQKAKSLLKVKGEDTFLDLIVRQVKHLRSISGTPVRLLLMNSFSTSADTLAYLEKYAADGFADRAEVELLQNRVP KILADGLSPASCPEQPELEWCPPGHGDLYPALLGSGWLDRLLEDGVKYAFVSNSDNLGAQLDMNFLRWFAESGAPFVMEV TRRTVADRKGGHLAVRKSDGQLILREVAQCPDEDIPEFQNISRHRYFNTNTLWIRLDALKEILDANGGVLPLPMIRNKKT LNPRDPESAPVYQLETAMGAGIECFPGARAVNVPRSRFFPVKTTSDLFLLRSDAIAVDEHGNVALAPERQGNTPVVDLDS KLYKLVDSLDGLGLPSLIGMDKLTLRGRFHFQDGAVLRGTLLMENDSDETKEILPGVYAGA
Sequences:
>Translated_461_residues MSTFTPFAEKMESAGVSAAAVNAFSRCYEALVSNHSGMIPETDILPADQVEDWQDITASTPAADKDLISRCVCIKLNGGL GTSMGLQKAKSLLKVKGEDTFLDLIVRQVKHLRSISGTPVRLLLMNSFSTSADTLAYLEKYAADGFADRAEVELLQNRVP KILADGLSPASCPEQPELEWCPPGHGDLYPALLGSGWLDRLLEDGVKYAFVSNSDNLGAQLDMNFLRWFAESGAPFVMEV TRRTVADRKGGHLAVRKSDGQLILREVAQCPDEDIPEFQNISRHRYFNTNTLWIRLDALKEILDANGGVLPLPMIRNKKT LNPRDPESAPVYQLETAMGAGIECFPGARAVNVPRSRFFPVKTTSDLFLLRSDAIAVDEHGNVALAPERQGNTPVVDLDS KLYKLVDSLDGLGLPSLIGMDKLTLRGRFHFQDGAVLRGTLLMENDSDETKEILPGVYAGA >Mature_460_residues STFTPFAEKMESAGVSAAAVNAFSRCYEALVSNHSGMIPETDILPADQVEDWQDITASTPAADKDLISRCVCIKLNGGLG TSMGLQKAKSLLKVKGEDTFLDLIVRQVKHLRSISGTPVRLLLMNSFSTSADTLAYLEKYAADGFADRAEVELLQNRVPK ILADGLSPASCPEQPELEWCPPGHGDLYPALLGSGWLDRLLEDGVKYAFVSNSDNLGAQLDMNFLRWFAESGAPFVMEVT RRTVADRKGGHLAVRKSDGQLILREVAQCPDEDIPEFQNISRHRYFNTNTLWIRLDALKEILDANGGVLPLPMIRNKKTL NPRDPESAPVYQLETAMGAGIECFPGARAVNVPRSRFFPVKTTSDLFLLRSDAIAVDEHGNVALAPERQGNTPVVDLDSK LYKLVDSLDGLGLPSLIGMDKLTLRGRFHFQDGAVLRGTLLMENDSDETKEILPGVYAGA
Specific function: Unknown
COG id: COG4284
COG function: function code G; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 1 family [H]
Homologues:
Organism=Homo sapiens, GI48255968, Length=425, Percent_Identity=39.0588235294118, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI48255966, Length=425, Percent_Identity=39.0588235294118, Blast_Score=272, Evalue=4e-73, Organism=Caenorhabditis elegans, GI17554114, Length=408, Percent_Identity=41.1764705882353, Blast_Score=270, Evalue=1e-72, Organism=Caenorhabditis elegans, GI71988370, Length=408, Percent_Identity=41.1764705882353, Blast_Score=270, Evalue=1e-72, Organism=Caenorhabditis elegans, GI17554112, Length=408, Percent_Identity=41.1764705882353, Blast_Score=270, Evalue=2e-72, Organism=Caenorhabditis elegans, GI71988365, Length=408, Percent_Identity=41.1764705882353, Blast_Score=270, Evalue=2e-72, Organism=Caenorhabditis elegans, GI17554108, Length=408, Percent_Identity=41.1764705882353, Blast_Score=269, Evalue=2e-72, Organism=Caenorhabditis elegans, GI17554110, Length=386, Percent_Identity=40.9326424870466, Blast_Score=253, Evalue=1e-67, Organism=Caenorhabditis elegans, GI25151022, Length=395, Percent_Identity=33.6708860759494, Blast_Score=204, Evalue=9e-53, Organism=Saccharomyces cerevisiae, GI6322815, Length=399, Percent_Identity=43.1077694235589, Blast_Score=286, Evalue=3e-78, Organism=Saccharomyces cerevisiae, GI6321775, Length=406, Percent_Identity=30.7881773399015, Blast_Score=159, Evalue=9e-40, Organism=Drosophila melanogaster, GI281365929, Length=411, Percent_Identity=38.1995133819951, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI281365931, Length=411, Percent_Identity=38.1995133819951, Blast_Score=259, Evalue=2e-69, Organism=Drosophila melanogaster, GI62484452, Length=413, Percent_Identity=38.0145278450363, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI62484278, Length=413, Percent_Identity=38.0145278450363, Blast_Score=256, Evalue=2e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002618 [H]
Pfam domain/function: PF01704 UDPGP [H]
EC number: 2.7.7.9
Molecular weight: Translated: 50437; Mature: 50306
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFTPFAEKMESAGVSAAAVNAFSRCYEALVSNHSGMIPETDILPADQVEDWQDITAST CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCC PAADKDLISRCVCIKLNGGLGTSMGLQKAKSLLKVKGEDTFLDLIVRQVKHLRSISGTPV CCCCHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCE RLLLMNSFSTSADTLAYLEKYAADGFADRAEVELLQNRVPKILADGLSPASCPEQPELEW EEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC CPPGHGDLYPALLGSGWLDRLLEDGVKYAFVSNSDNLGAQLDMNFLRWFAESGAPFVMEV CCCCCCCCHHHHHCCHHHHHHHHCCCEEEEEECCCCCCCEECHHHHHHHHHCCCCEEHHH TRRTVADRKGGHLAVRKSDGQLILREVAQCPDEDIPEFQNISRHRYFNTNTLWIRLDALK HHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCHHHCCCHHEEECCCEEEEEHHHHH EILDANGGVLPLPMIRNKKTLNPRDPESAPVYQLETAMGAGIECFPGARAVNVPRSRFFP HHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCEECCCCCEECCCHHHEEC VKTTSDLFLLRSDAIAVDEHGNVALAPERQGNTPVVDLDSKLYKLVDSLDGLGLPSLIGM CCCCCCEEEEECCCEEEECCCCEEECCCCCCCCCEEECHHHHHHHHHHHCCCCCCHHHCC DKLTLRGRFHFQDGAVLRGTLLMENDSDETKEILPGVYAGA CCEEEEEEEEECCCCEEEEEEEEECCCCHHHHHCCCHHCCC >Mature Secondary Structure STFTPFAEKMESAGVSAAAVNAFSRCYEALVSNHSGMIPETDILPADQVEDWQDITAST CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCC PAADKDLISRCVCIKLNGGLGTSMGLQKAKSLLKVKGEDTFLDLIVRQVKHLRSISGTPV CCCCHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCE RLLLMNSFSTSADTLAYLEKYAADGFADRAEVELLQNRVPKILADGLSPASCPEQPELEW EEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC CPPGHGDLYPALLGSGWLDRLLEDGVKYAFVSNSDNLGAQLDMNFLRWFAESGAPFVMEV CCCCCCCCHHHHHCCHHHHHHHHCCCEEEEEECCCCCCCEECHHHHHHHHHCCCCEEHHH TRRTVADRKGGHLAVRKSDGQLILREVAQCPDEDIPEFQNISRHRYFNTNTLWIRLDALK HHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCHHHCCCHHEEECCCEEEEEHHHHH EILDANGGVLPLPMIRNKKTLNPRDPESAPVYQLETAMGAGIECFPGARAVNVPRSRFFP HHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCEECCCCCEECCCHHHEEC VKTTSDLFLLRSDAIAVDEHGNVALAPERQGNTPVVDLDSKLYKLVDSLDGLGLPSLIGM CCCCCCEEEEECCCEEEECCCCEEECCCCCCCCCEEECHHHHHHHHHHHCCCCCCHHHCC DKLTLRGRFHFQDGAVLRGTLLMENDSDETKEILPGVYAGA CCEEEEEEEEECCCCEEEEEEEEECCCCHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UTP; alpha-D-glucose 1-phosphate
Specific reaction: UTP + alpha-D-glucose 1-phosphate = diphosphate + UDP-glucose
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA