Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187736216

Identifier: 187736216

GI number: 187736216

Start: 2111042

End: 2111488

Strand: Reverse

Name: 187736216

Synonym: Amuc_1729

Alternate gene names: NA

Gene position: 2111488-2111042 (Counterclockwise)

Preceding gene: 187736217

Following gene: 187736215

Centisome position: 79.26

GC content: 57.94

Gene sequence:

>447_bases
ATGGCTTCAACAACGCTGACGCCGCACGGCCACCGTACCGGAGGTGGACGTACGGGTCAGAACACCGCCCTCCGCATGTC
CACCTCCACGAAAATCATTGTCGGCATCGTGATCGTCGTCGTTATGGCGCTCACTTCCTTCTGGGGTGTTTACGCTCCTT
CTTTTTCGGAAGCCTATATACTGCCCGTCCAGATGACGGCGGCTGACGGAACACCGCTTGGCGACTTCCAGTGCCGTCCT
GTACCCGGGGAAAACGGAAAGACGCTCCTGGTCTTCCGGGATGCGGATTTCCTGCGCCAGACTACGGGCGGCATGGTGCA
TTCCAAAATCATCCTTTCCTACAAAGGCACGCCGTTCTTTGAAGGAATTGTCCCCGGTCCCATGGAGGCCATTGAAATTC
CCTCCGGCAGCCTTCCTCCCCCCTTACGGGAACTCCGGCATCACTAA

Upstream 100 bases:

>100_bases
GCTGGCTGGATGAACGGGAAACAGTTCTGGAGACTCTAATATCCATCCGGCGCGCCGGGGCCGATATGATCCTTACGTAT
TACGCCCCCCAGGCCGCCGA

Downstream 100 bases:

>100_bases
GCCCCCCCCCCCCCGGGAAGACGGCCTGTTATGGCATTGTTACTGAAAGGGCGCAGGTTTCTCTATACAACAGGGGAAAT
ATTGTGGTTTTATAGAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MASTTLTPHGHRTGGGRTGQNTALRMSTSTKIIVGIVIVVVMALTSFWGVYAPSFSEAYILPVQMTAADGTPLGDFQCRP
VPGENGKTLLVFRDADFLRQTTGGMVHSKIILSYKGTPFFEGIVPGPMEAIEIPSGSLPPPLRELRHH

Sequences:

>Translated_148_residues
MASTTLTPHGHRTGGGRTGQNTALRMSTSTKIIVGIVIVVVMALTSFWGVYAPSFSEAYILPVQMTAADGTPLGDFQCRP
VPGENGKTLLVFRDADFLRQTTGGMVHSKIILSYKGTPFFEGIVPGPMEAIEIPSGSLPPPLRELRHH
>Mature_147_residues
ASTTLTPHGHRTGGGRTGQNTALRMSTSTKIIVGIVIVVVMALTSFWGVYAPSFSEAYILPVQMTAADGTPLGDFQCRPV
PGENGKTLLVFRDADFLRQTTGGMVHSKIILSYKGTPFFEGIVPGPMEAIEIPSGSLPPPLRELRHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15878; Mature: 15746

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTTLTPHGHRTGGGRTGQNTALRMSTSTKIIVGIVIVVVMALTSFWGVYAPSFSEAYI
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LPVQMTAADGTPLGDFQCRPVPGENGKTLLVFRDADFLRQTTGGMVHSKIILSYKGTPFF
EEEEEECCCCCCCCCCEECCCCCCCCCEEEEEECCHHHHHHCCCEEEEEEEEEECCCCCC
EGIVPGPMEAIEIPSGSLPPPLRELRHH
CCCCCCCCCEEECCCCCCCCCHHHHCCC
>Mature Secondary Structure 
ASTTLTPHGHRTGGGRTGQNTALRMSTSTKIIVGIVIVVVMALTSFWGVYAPSFSEAYI
CCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LPVQMTAADGTPLGDFQCRPVPGENGKTLLVFRDADFLRQTTGGMVHSKIILSYKGTPFF
EEEEEECCCCCCCCCCEECCCCCCCCCEEEEEECCHHHHHHCCCEEEEEEEEEECCCCCC
EGIVPGPMEAIEIPSGSLPPPLRELRHH
CCCCCCCCCEEECCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA