Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is hisD2 [H]
Identifier: 187736201
GI number: 187736201
Start: 2082977
End: 2084275
Strand: Direct
Name: hisD2 [H]
Synonym: Amuc_1714
Alternate gene names: 187736201
Gene position: 2082977-2084275 (Clockwise)
Preceding gene: 187736198
Following gene: 187736202
Centisome position: 78.19
GC content: 60.74
Gene sequence:
>1299_bases ATGAAAATTTACCGTCCTTCCGATACCTGCTTTGACGAGATGAAGCGCCGGATGAACCGCCGCGCACTCCCGGAGGATTC CGTAAGGGATACCGTGAACGCTATTATCCGGGATGTTTCCGTGCGCGGAGATGAAGCCCTGTTTGATTATGCCGCCAGAT TTGACAAGGCGCATCTGGATTCTTCCTCCCTGTTCGTAACGGAGGCAGAACTGGCGGAAGCGGAGGCCATGGTGGAGGAG TCTGTGAAGGAGGCCATTGCCGTTTCTCTGGCAAACATCCATTATTTTTCAGACCGCAGCCGCAGGCGGGACTGGTCCGG CGTGAATGCGCAGGGCGTGGAGGTAGCGGAGCGGTTCCTTCCGTACGACCGTGTGGGCATTTATATCCCCGGAGGAAAGG CTCCCCTGGTATCTACTTCCATCATGACGGGCGGTTTTGCTCAGGCCGCCGGCGTGCGGGAGATTGTGGCCGCCACGCCC TGCGGGCCGGACGGCCGGGTGAATCCCGCGCTTTTGTATGCGCTGAAAGCCTCCGGCGCAACGGAGATTGTCAAGATAGG GGGAGCCCAGGCGATAGCCGCCCTTGCGCTGGGGACGGAGAGCGTGAGACCGGTGGAGAAGATTTTTGGCCCCGGCAACC GTTTTGTGGTGGAGGCCAAGCGTCAGTTGGTGGGGGCCGTTGCCATTGATTTGCTGCCCGGCCCCAGTGAAGTAATGGTG CTGGCAGATGATACTGCGGATGCGGAGTTCCTTGCTGCCGACCTGCTGGCGCAGGGCGAGCATGGCCCGGACAGCGTAGT TGTTTTTGTCACCACATCGAAAGCGTTATTGGAGCAGGTGGAGGCGGAAGTGGAACGCCAGGCCGCCCTGCTGAGCCGCG GGTCCATCATCCGGGAGGTGCTGGACAAGCATGCCTACGGTTTTCTGGTTTCTTCCATTCAGGAAGGGGTGGAACTGGTT AATGCTTTTGCGCCGGAACATTTGGTGCTCGTCACGAGGGATGAAGAAGCCGTGCTGAATGGCATCAGGACGGCGGGAGC CATTTACGCAGGCTCCCTTTCTACTGTAGCCTGCGGGGATTTTCTGGCGGGTCCCAGCCATACGCTGCCTACCGGCGGCG CCGGCAAGTCTTTTTCCGGCTTGCGGGCGGATCAGTTCCAGCGCCGCACCAGCGTGGTGCGCATGGACCGGAATGCCGTG CTGAACTCCGCCCCGTATGTGGCAGAGTTCGCCCGGGTGGAGGGGCTGGACGCCCACAACCACTCCATTCAGGTTCGCGC CGCCCGTGTGGACCGGTAA
Upstream 100 bases:
>100_bases GGCGCCGTGAAGCCCTGTTGGAAATCAAAGAGGACAGAAGGCTTGACTGCGTGCTTAAAGATTGGGAAACTTCCTTTCCG TTTTTCTGTAGAGACCTTTT
Downstream 100 bases:
>100_bases TTCCGGATTTTTCCAATTCTCTCCATGATGCAACAGCGGGGAACCAGGGAACGGTTGCCAATTGCAGCAGGTCTCCTTAT TGCCGGACATGGCGATATGG
Product: Histidinol dehydrogenase
Products: NA
Alternate protein names: HDH 2 [H]
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKIYRPSDTCFDEMKRRMNRRALPEDSVRDTVNAIIRDVSVRGDEALFDYAARFDKAHLDSSSLFVTEAELAEAEAMVEE SVKEAIAVSLANIHYFSDRSRRRDWSGVNAQGVEVAERFLPYDRVGIYIPGGKAPLVSTSIMTGGFAQAAGVREIVAATP CGPDGRVNPALLYALKASGATEIVKIGGAQAIAALALGTESVRPVEKIFGPGNRFVVEAKRQLVGAVAIDLLPGPSEVMV LADDTADAEFLAADLLAQGEHGPDSVVVFVTTSKALLEQVEAEVERQAALLSRGSIIREVLDKHAYGFLVSSIQEGVELV NAFAPEHLVLVTRDEEAVLNGIRTAGAIYAGSLSTVACGDFLAGPSHTLPTGGAGKSFSGLRADQFQRRTSVVRMDRNAV LNSAPYVAEFARVEGLDAHNHSIQVRAARVDR
Sequences:
>Translated_432_residues MKIYRPSDTCFDEMKRRMNRRALPEDSVRDTVNAIIRDVSVRGDEALFDYAARFDKAHLDSSSLFVTEAELAEAEAMVEE SVKEAIAVSLANIHYFSDRSRRRDWSGVNAQGVEVAERFLPYDRVGIYIPGGKAPLVSTSIMTGGFAQAAGVREIVAATP CGPDGRVNPALLYALKASGATEIVKIGGAQAIAALALGTESVRPVEKIFGPGNRFVVEAKRQLVGAVAIDLLPGPSEVMV LADDTADAEFLAADLLAQGEHGPDSVVVFVTTSKALLEQVEAEVERQAALLSRGSIIREVLDKHAYGFLVSSIQEGVELV NAFAPEHLVLVTRDEEAVLNGIRTAGAIYAGSLSTVACGDFLAGPSHTLPTGGAGKSFSGLRADQFQRRTSVVRMDRNAV LNSAPYVAEFARVEGLDAHNHSIQVRAARVDR >Mature_432_residues MKIYRPSDTCFDEMKRRMNRRALPEDSVRDTVNAIIRDVSVRGDEALFDYAARFDKAHLDSSSLFVTEAELAEAEAMVEE SVKEAIAVSLANIHYFSDRSRRRDWSGVNAQGVEVAERFLPYDRVGIYIPGGKAPLVSTSIMTGGFAQAAGVREIVAATP CGPDGRVNPALLYALKASGATEIVKIGGAQAIAALALGTESVRPVEKIFGPGNRFVVEAKRQLVGAVAIDLLPGPSEVMV LADDTADAEFLAADLLAQGEHGPDSVVVFVTTSKALLEQVEAEVERQAALLSRGSIIREVLDKHAYGFLVSSIQEGVELV NAFAPEHLVLVTRDEEAVLNGIRTAGAIYAGSLSTVACGDFLAGPSHTLPTGGAGKSFSGLRADQFQRRTSVVRMDRNAV LNSAPYVAEFARVEGLDAHNHSIQVRAARVDR
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=424, Percent_Identity=37.5, Blast_Score=275, Evalue=5e-75, Organism=Saccharomyces cerevisiae, GI6319819, Length=422, Percent_Identity=36.4928909952607, Blast_Score=256, Evalue=4e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46292; Mature: 46292
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIYRPSDTCFDEMKRRMNRRALPEDSVRDTVNAIIRDVSVRGDEALFDYAARFDKAHLD CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC SSSLFVTEAELAEAEAMVEESVKEAIAVSLANIHYFSDRSRRRDWSGVNAQGVEVAERFL CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHC PYDRVGIYIPGGKAPLVSTSIMTGGFAQAAGVREIVAATPCGPDGRVNPALLYALKASGA CCCCEEEEECCCCCCEEEHHHHCCCHHHHCCHHHHHHCCCCCCCCCCCHHEEEEEECCCC TEIVKIGGAQAIAALALGTESVRPVEKIFGPGNRFVVEAKRQLVGAVAIDLLPGPSEVMV CEEEEECCHHHHHHHHHCCCCCCHHHHHHCCCCEEEHHHHHHHHHHHHEEECCCCCCEEE LADDTADAEFLAADLLAQGEHGPDSVVVFVTTSKALLEQVEAEVERQAALLSRGSIIREV EECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH LDKHAYGFLVSSIQEGVELVNAFAPEHLVLVTRDEEAVLNGIRTAGAIYAGSLSTVACGD HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCEEECCCCHHHCCH FLAGPSHTLPTGGAGKSFSGLRADQFQRRTSVVRMDRNAVLNSAPYVAEFARVEGLDAHN HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHCCCCCCC HSIQVRAARVDR CEEEEEEECCCC >Mature Secondary Structure MKIYRPSDTCFDEMKRRMNRRALPEDSVRDTVNAIIRDVSVRGDEALFDYAARFDKAHLD CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC SSSLFVTEAELAEAEAMVEESVKEAIAVSLANIHYFSDRSRRRDWSGVNAQGVEVAERFL CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHC PYDRVGIYIPGGKAPLVSTSIMTGGFAQAAGVREIVAATPCGPDGRVNPALLYALKASGA CCCCEEEEECCCCCCEEEHHHHCCCHHHHCCHHHHHHCCCCCCCCCCCHHEEEEEECCCC TEIVKIGGAQAIAALALGTESVRPVEKIFGPGNRFVVEAKRQLVGAVAIDLLPGPSEVMV CEEEEECCHHHHHHHHHCCCCCCHHHHHHCCCCEEEHHHHHHHHHHHHEEECCCCCCEEE LADDTADAEFLAADLLAQGEHGPDSVVVFVTTSKALLEQVEAEVERQAALLSRGSIIREV EECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH LDKHAYGFLVSSIQEGVELVNAFAPEHLVLVTRDEEAVLNGIRTAGAIYAGSLSTVACGD HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCEEECCCCHHHCCH FLAGPSHTLPTGGAGKSFSGLRADQFQRRTSVVRMDRNAVLNSAPYVAEFARVEGLDAHN HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHCCCCCCC HSIQVRAARVDR CEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA