Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736198
Identifier: 187736198
GI number: 187736198
Start: 2079765
End: 2080487
Strand: Direct
Name: 187736198
Synonym: Amuc_1711
Alternate gene names: NA
Gene position: 2079765-2080487 (Clockwise)
Preceding gene: 187736197
Following gene: 187736201
Centisome position: 78.07
GC content: 45.92
Gene sequence:
>723_bases ATGAATAACAATATTGAAGAACATCCTATCCAATTTGAAGCAGATATGATTCGGGCATTGCTGCAGGAATACAGCACTCC CGGCGAGTACAAAAATCAAACCCGCCGCACAAGCGGCCTGAACCAGTTTAATGAACTCCCTGAAGCTTTGAAAGAAAGAG GGTGGGAGATTCAGGAATTCATAGAAGAGTCCGGCTTGTGGCTGGCTGTTTCCGAGGAAGGAAGCGGAAAGTTTTCAGAT ATTTTTATCCCGTGGATTGAATGTCCCTACGGGAAAGTTGGCGACCGTTTGTGGGTGCAGGAGGAGATTTGCCATAATAG CCGTTCTGGATGGCTTTATTCTGCTGATGGCGTTTGTTTGCCAATGTCATATCCAGACGGATGGATATTAGAAGATGCCC GCAGGCAGTTTATTCCTTCGATCCACATGCCGCGTTGGGCTTCCCGGATTTTACTGGAAATTACGGAAATCAGAGTTGAG CGGCTTTTGGACATTACGACGAACGATGCACGGATGGAGGGCATTGAATGCGTCTGGAACGATGAAGAAACGGATGCCTG TTTATGGAGGGATTACTCGGGAAAATCTGCGGGGTTGGCTTTTGCCCGGTTATCTTTCTTTTCCTTGTGGGAAAAAATAA AGGGAACCGGTTCCGTTGAACTGAATCCGTGGGTATGGGTTATTAAGTTCAATGTGTTAACTATCAACGGAAATATCAAA TAA
Upstream 100 bases:
>100_bases AGGATGGAACAGCCACTTCAGAATGGGCTCTGTCTTTTTTTTAATCTGCGGAAGATTTAACGGATTTTGGAATAATCTGG TGTTATCAATAATCAAGACC
Downstream 100 bases:
>100_bases AGAATGTTAATGTCCTTTGTGAAGAACAAAATAAGAATATGTCTTTTACAGAGGGGGCGCCCACTAAGCGGAGGGAATAG CTTCCGTTGCAATTCAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MNNNIEEHPIQFEADMIRALLQEYSTPGEYKNQTRRTSGLNQFNELPEALKERGWEIQEFIEESGLWLAVSEEGSGKFSD IFIPWIECPYGKVGDRLWVQEEICHNSRSGWLYSADGVCLPMSYPDGWILEDARRQFIPSIHMPRWASRILLEITEIRVE RLLDITTNDARMEGIECVWNDEETDACLWRDYSGKSAGLAFARLSFFSLWEKIKGTGSVELNPWVWVIKFNVLTINGNIK
Sequences:
>Translated_240_residues MNNNIEEHPIQFEADMIRALLQEYSTPGEYKNQTRRTSGLNQFNELPEALKERGWEIQEFIEESGLWLAVSEEGSGKFSD IFIPWIECPYGKVGDRLWVQEEICHNSRSGWLYSADGVCLPMSYPDGWILEDARRQFIPSIHMPRWASRILLEITEIRVE RLLDITTNDARMEGIECVWNDEETDACLWRDYSGKSAGLAFARLSFFSLWEKIKGTGSVELNPWVWVIKFNVLTINGNIK >Mature_240_residues MNNNIEEHPIQFEADMIRALLQEYSTPGEYKNQTRRTSGLNQFNELPEALKERGWEIQEFIEESGLWLAVSEEGSGKFSD IFIPWIECPYGKVGDRLWVQEEICHNSRSGWLYSADGVCLPMSYPDGWILEDARRQFIPSIHMPRWASRILLEITEIRVE RLLDITTNDARMEGIECVWNDEETDACLWRDYSGKSAGLAFARLSFFSLWEKIKGTGSVELNPWVWVIKFNVLTINGNIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27844; Mature: 27844
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNIEEHPIQFEADMIRALLQEYSTPGEYKNQTRRTSGLNQFNELPEALKERGWEIQEF CCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IEESGLWLAVSEEGSGKFSDIFIPWIECPYGKVGDRLWVQEEICHNSRSGWLYSADGVCL HHHCCCEEEEECCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCEEE PMSYPDGWILEDARRQFIPSIHMPRWASRILLEITEIRVERLLDITTNDARMEGIECVWN ECCCCCCCEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCEEEEEC DEETDACLWRDYSGKSAGLAFARLSFFSLWEKIKGTGSVELNPWVWVIKFNVLTINGNIK CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCEEEEEEEEEEEECCCCC >Mature Secondary Structure MNNNIEEHPIQFEADMIRALLQEYSTPGEYKNQTRRTSGLNQFNELPEALKERGWEIQEF CCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IEESGLWLAVSEEGSGKFSDIFIPWIECPYGKVGDRLWVQEEICHNSRSGWLYSADGVCL HHHCCCEEEEECCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCEEE PMSYPDGWILEDARRQFIPSIHMPRWASRILLEITEIRVERLLDITTNDARMEGIECVWN ECCCCCCCEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCEEEEEC DEETDACLWRDYSGKSAGLAFARLSFFSLWEKIKGTGSVELNPWVWVIKFNVLTINGNIK CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCEEEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA