Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187736202
Identifier: 187736202
GI number: 187736202
Start: 2084538
End: 2085434
Strand: Direct
Name: 187736202
Synonym: Amuc_1715
Alternate gene names: NA
Gene position: 2084538-2085434 (Clockwise)
Preceding gene: 187736201
Following gene: 187736203
Centisome position: 78.25
GC content: 55.85
Gene sequence:
>897_bases ATGTTCAAGTCCCTCATCCGCACGTTTGCCATTGTGGCGGCCTTCATCGCGGGGTACATGATGCCCGGTCTGCATGTGTA CAGTTGGATGTTCAAGTGGATGCTGATTGTGATGCTGTTCGTAACCTTTCTGGGCATCCGCTTCAAACGCATGAAGCCGG AACGGGCTCACTGGCTCCTGACGGGGGCTAATCTGATGGTCGCCTTGGCGGCATGGGGTGTGTGCCGCCTTGTTTTTGGG GATGGGTATCTGGCACAGGCCGCTTTTTTCGTAGGTATCATGCCTACAGCCACGGCGGCTCCCGTGGTGATGGGGTTGCT GGGCGGCAGCGTGGAGTTTATGCTGACCGCCCTTTTGCTGATTAACGGTATTATCTGCGCCCTGCTGCCTTTCATCCTGC CGGCGGTTGTTGGGCGGGGCGGTTTTGAGATTTATCTGAACGTGGCCCAGAATATTTCCTTGGTCATGTTGCTTCCCCTG GCGCTGGCGCTGGCGGCGCGGCGTTTTTATCCGCGCGCCATTGCCTGGCCCAGGAAGTTGAAAGACGTCACTTTTGGCAT TTGGGTGGTGATTCTGGTTTTGATAGCCGCAAACGCCTCTTATGATATTTCCTCCCGTGAGGGCATTTCGGAACGTGTTT TGGAACAGATTGGCGTGATGGCCTTGCTGGTTTGCGGGTTCAATTTCGGGTTGGGATATTTGCTGGGGGGGCGCACGCGC GCTGCGGAGTGCAGCCAGGCATTAGGGCAGAAGAATACCACCCTGTCCATTTATCTGGCTTTGACGTATGCCAGCCCCAT TGCCGCTCTGGGCCCCACGTTTTATGTACTGTGGCATAATTTATGGAATGCCTGGCAGTTGTACCGCGTGTCCGAACGAA AGCGCAGGGATGGATGA
Upstream 100 bases:
>100_bases CCGATTCATTTGCGAGATTTGTCGGGATGGAACGCTCATCGGATGGGAGGTTTCATCCATTTGCTCGAAAATCCCGCGTA ATCGTTTCACCGCATTTCTC
Downstream 100 bases:
>100_bases GGAAGGGGGGGCATCCGGTTCGGCGGAAGTCCCCGGCAGAATTATGGGGATTTCCATGGTCGGAAAAACGGGAGGGAGGG TTCTTTTGAGCCGGTTCCAA
Product: Na+-dependent transporter-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MFKSLIRTFAIVAAFIAGYMMPGLHVYSWMFKWMLIVMLFVTFLGIRFKRMKPERAHWLLTGANLMVALAAWGVCRLVFG DGYLAQAAFFVGIMPTATAAPVVMGLLGGSVEFMLTALLLINGIICALLPFILPAVVGRGGFEIYLNVAQNISLVMLLPL ALALAARRFYPRAIAWPRKLKDVTFGIWVVILVLIAANASYDISSREGISERVLEQIGVMALLVCGFNFGLGYLLGGRTR AAECSQALGQKNTTLSIYLALTYASPIAALGPTFYVLWHNLWNAWQLYRVSERKRRDG
Sequences:
>Translated_298_residues MFKSLIRTFAIVAAFIAGYMMPGLHVYSWMFKWMLIVMLFVTFLGIRFKRMKPERAHWLLTGANLMVALAAWGVCRLVFG DGYLAQAAFFVGIMPTATAAPVVMGLLGGSVEFMLTALLLINGIICALLPFILPAVVGRGGFEIYLNVAQNISLVMLLPL ALALAARRFYPRAIAWPRKLKDVTFGIWVVILVLIAANASYDISSREGISERVLEQIGVMALLVCGFNFGLGYLLGGRTR AAECSQALGQKNTTLSIYLALTYASPIAALGPTFYVLWHNLWNAWQLYRVSERKRRDG >Mature_298_residues MFKSLIRTFAIVAAFIAGYMMPGLHVYSWMFKWMLIVMLFVTFLGIRFKRMKPERAHWLLTGANLMVALAAWGVCRLVFG DGYLAQAAFFVGIMPTATAAPVVMGLLGGSVEFMLTALLLINGIICALLPFILPAVVGRGGFEIYLNVAQNISLVMLLPL ALALAARRFYPRAIAWPRKLKDVTFGIWVVILVLIAANASYDISSREGISERVLEQIGVMALLVCGFNFGLGYLLGGRTR AAECSQALGQKNTTLSIYLALTYASPIAALGPTFYVLWHNLWNAWQLYRVSERKRRDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32968; Mature: 32968
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKSLIRTFAIVAAFIAGYMMPGLHVYSWMFKWMLIVMLFVTFLGIRFKRMKPERAHWLL CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEE TGANLMVALAAWGVCRLVFGDGYLAQAAFFVGIMPTATAAPVVMGLLGGSVEFMLTALLL ECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH INGIICALLPFILPAVVGRGGFEIYLNVAQNISLVMLLPLALALAARRFYPRAIAWPRKL HHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHCCHHHCCHHHH KDVTFGIWVVILVLIAANASYDISSREGISERVLEQIGVMALLVCGFNFGLGYLLGGRTR HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCH AAECSQALGQKNTTLSIYLALTYASPIAALGPTFYVLWHNLWNAWQLYRVSERKRRDG HHHHHHHHCCCCCEEEEEEEEEHHCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFKSLIRTFAIVAAFIAGYMMPGLHVYSWMFKWMLIVMLFVTFLGIRFKRMKPERAHWLL CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEE TGANLMVALAAWGVCRLVFGDGYLAQAAFFVGIMPTATAAPVVMGLLGGSVEFMLTALLL ECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH INGIICALLPFILPAVVGRGGFEIYLNVAQNISLVMLLPLALALAARRFYPRAIAWPRKL HHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHCCHHHCCHHHH KDVTFGIWVVILVLIAANASYDISSREGISERVLEQIGVMALLVCGFNFGLGYLLGGRTR HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCH AAECSQALGQKNTTLSIYLALTYASPIAALGPTFYVLWHNLWNAWQLYRVSERKRRDG HHHHHHHHCCCCCEEEEEEEEEHHCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA