Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736178
Identifier: 187736178
GI number: 187736178
Start: 2054903
End: 2055190
Strand: Direct
Name: 187736178
Synonym: Amuc_1691
Alternate gene names: NA
Gene position: 2054903-2055190 (Clockwise)
Preceding gene: 187736177
Following gene: 187736192
Centisome position: 77.13
GC content: 50.69
Gene sequence:
>288_bases GTGCGCTCAGGCATCCGGGAAATTCTTTCACAGACTCCGCAGATTAGGAAAGCCGTTTTATTCGGTTCCCGCGCCCTAGG CACGTGGAAGCCTGCGTCCGATATCGATCTTGCCCTGGAGGGCGAGGAGCTGGATTTGTCCGTCCTTTTGACTCTCCAAG CGCGTCTCACAGAGTTGAACCTGCCTGTGGAAGTGGACTTGATTATTCGTAACAAAATTACTAATCCTGATTTGGAGAGT CATATCCATGCTTATGGCCAGGAATGGTTTTCCCGTTCCATGGAATGA
Upstream 100 bases:
>100_bases CCCTGATTAAGGGAAAATTCTTTCCCATGCTGGCCCAATGTGTGGAAAATCTGAACATGATGGCGGAGAAAGAGGACTGA ACGATGGCCTGACGGCCAAG
Downstream 100 bases:
>100_bases AGGGGGGTGATTCCGGAGGGGCCTGCCTTTGAGAGGTGATAAAGTGCCTATGGGCTCGCTAAAAAATAGTTGGCCATTTC ACGGAAGTTTTTTCACAAAG
Product: DNA polymerase beta domain protein region
Products: NA
Alternate protein names: DNA Polymerase Beta Domain-Containing Protein Region; DNA Polymerase Beta Domain-Containing Protein; DNA Polymerase Beta Subunit; DNA Polymerase Beta-Like Region; O-Succinylbenzoic Acid Synthetase; DNA Polymerase Subunit Beta
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MRSGIREILSQTPQIRKAVLFGSRALGTWKPASDIDLALEGEELDLSVLLTLQARLTELNLPVEVDLIIRNKITNPDLES HIHAYGQEWFSRSME
Sequences:
>Translated_95_residues MRSGIREILSQTPQIRKAVLFGSRALGTWKPASDIDLALEGEELDLSVLLTLQARLTELNLPVEVDLIIRNKITNPDLES HIHAYGQEWFSRSME >Mature_95_residues MRSGIREILSQTPQIRKAVLFGSRALGTWKPASDIDLALEGEELDLSVLLTLQARLTELNLPVEVDLIIRNKITNPDLES HIHAYGQEWFSRSME
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10756; Mature: 10756
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSGIREILSQTPQIRKAVLFGSRALGTWKPASDIDLALEGEELDLSVLLTLQARLTELN CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEHEEHHHHHHHHCC LPVEVDLIIRNKITNPDLESHIHAYGQEWFSRSME CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRSGIREILSQTPQIRKAVLFGSRALGTWKPASDIDLALEGEELDLSVLLTLQARLTELN CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEHEEHHHHHHHHCC LPVEVDLIIRNKITNPDLESHIHAYGQEWFSRSME CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA