Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736178

Identifier: 187736178

GI number: 187736178

Start: 2054903

End: 2055190

Strand: Direct

Name: 187736178

Synonym: Amuc_1691

Alternate gene names: NA

Gene position: 2054903-2055190 (Clockwise)

Preceding gene: 187736177

Following gene: 187736192

Centisome position: 77.13

GC content: 50.69

Gene sequence:

>288_bases
GTGCGCTCAGGCATCCGGGAAATTCTTTCACAGACTCCGCAGATTAGGAAAGCCGTTTTATTCGGTTCCCGCGCCCTAGG
CACGTGGAAGCCTGCGTCCGATATCGATCTTGCCCTGGAGGGCGAGGAGCTGGATTTGTCCGTCCTTTTGACTCTCCAAG
CGCGTCTCACAGAGTTGAACCTGCCTGTGGAAGTGGACTTGATTATTCGTAACAAAATTACTAATCCTGATTTGGAGAGT
CATATCCATGCTTATGGCCAGGAATGGTTTTCCCGTTCCATGGAATGA

Upstream 100 bases:

>100_bases
CCCTGATTAAGGGAAAATTCTTTCCCATGCTGGCCCAATGTGTGGAAAATCTGAACATGATGGCGGAGAAAGAGGACTGA
ACGATGGCCTGACGGCCAAG

Downstream 100 bases:

>100_bases
AGGGGGGTGATTCCGGAGGGGCCTGCCTTTGAGAGGTGATAAAGTGCCTATGGGCTCGCTAAAAAATAGTTGGCCATTTC
ACGGAAGTTTTTTCACAAAG

Product: DNA polymerase beta domain protein region

Products: NA

Alternate protein names: DNA Polymerase Beta Domain-Containing Protein Region; DNA Polymerase Beta Domain-Containing Protein; DNA Polymerase Beta Subunit; DNA Polymerase Beta-Like Region; O-Succinylbenzoic Acid Synthetase; DNA Polymerase Subunit Beta

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MRSGIREILSQTPQIRKAVLFGSRALGTWKPASDIDLALEGEELDLSVLLTLQARLTELNLPVEVDLIIRNKITNPDLES
HIHAYGQEWFSRSME

Sequences:

>Translated_95_residues
MRSGIREILSQTPQIRKAVLFGSRALGTWKPASDIDLALEGEELDLSVLLTLQARLTELNLPVEVDLIIRNKITNPDLES
HIHAYGQEWFSRSME
>Mature_95_residues
MRSGIREILSQTPQIRKAVLFGSRALGTWKPASDIDLALEGEELDLSVLLTLQARLTELNLPVEVDLIIRNKITNPDLES
HIHAYGQEWFSRSME

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10756; Mature: 10756

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSGIREILSQTPQIRKAVLFGSRALGTWKPASDIDLALEGEELDLSVLLTLQARLTELN
CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEHEEHHHHHHHHCC
LPVEVDLIIRNKITNPDLESHIHAYGQEWFSRSME
CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRSGIREILSQTPQIRKAVLFGSRALGTWKPASDIDLALEGEELDLSVLLTLQARLTELN
CCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEHEEHHHHHHHHCC
LPVEVDLIIRNKITNPDLESHIHAYGQEWFSRSME
CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA