Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736177
Identifier: 187736177
GI number: 187736177
Start: 2054475
End: 2054882
Strand: Direct
Name: 187736177
Synonym: Amuc_1690
Alternate gene names: NA
Gene position: 2054475-2054882 (Clockwise)
Preceding gene: 187736176
Following gene: 187736178
Centisome position: 77.12
GC content: 48.04
Gene sequence:
>408_bases ATGAACGATAACCTGCGCTGGAAACAAAGGCTTCAAAACCTGAATAAGGCTTTTTCCCGGTTGCGCCATGCTTGCACGTT GCCGGAATACAATGAACTGGAAATGGCCGGACTGGTGCAGACTTATGAATTTACGTTTGAGCTGTGCTGGAAAACGTTGA AAGATAAGCTGGTCTATGACGGCTACAGCGTTAACAGCCCCCGCGAAGCCATCAGGCAGGCGTTTGGCGCAGATTTGATA GGTCATATTGATTGTTGGCTCCAGGCGCTGGAAAGCCGCAATTTGTTTGTACATACTTATGATGATTCCATCGCGGAAGA GGCGGTTTCCCTGATTAAGGGAAAATTCTTTCCCATGCTGGCCCAATGTGTGGAAAATCTGAACATGATGGCGGAGAAAG AGGACTGA
Upstream 100 bases:
>100_bases TTCATGAATCCATGCTGGCTTCCGAGGGGATTGCCATTCACATGTAACGGTTTTCACGGGAAGAGCCCCGCAACGGGGCT CTTTTTCTCCATTAAAAAAG
Downstream 100 bases:
>100_bases ACGATGGCCTGACGGCCAAGGTGCGCTCAGGCATCCGGGAAATTCTTTCACAGACTCCGCAGATTAGGAAAGCCGTTTTA TTCGGTTCCCGCGCCCTAGG
Product: nucleotidyltransferase substrate binding protein, HI0074 family
Products: NA
Alternate protein names: Nucleotidyltransferase; Nucleotidyltransferase Fused Substrate-Bimding Domain; Nucleotidyltransferase Domain-Containing Protein
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MNDNLRWKQRLQNLNKAFSRLRHACTLPEYNELEMAGLVQTYEFTFELCWKTLKDKLVYDGYSVNSPREAIRQAFGADLI GHIDCWLQALESRNLFVHTYDDSIAEEAVSLIKGKFFPMLAQCVENLNMMAEKED
Sequences:
>Translated_135_residues MNDNLRWKQRLQNLNKAFSRLRHACTLPEYNELEMAGLVQTYEFTFELCWKTLKDKLVYDGYSVNSPREAIRQAFGADLI GHIDCWLQALESRNLFVHTYDDSIAEEAVSLIKGKFFPMLAQCVENLNMMAEKED >Mature_135_residues MNDNLRWKQRLQNLNKAFSRLRHACTLPEYNELEMAGLVQTYEFTFELCWKTLKDKLVYDGYSVNSPREAIRQAFGADLI GHIDCWLQALESRNLFVHTYDDSIAEEAVSLIKGKFFPMLAQCVENLNMMAEKED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15758; Mature: 15758
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDNLRWKQRLQNLNKAFSRLRHACTLPEYNELEMAGLVQTYEFTFELCWKTLKDKLVYD CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GYSVNSPREAIRQAFGADLIGHIDCWLQALESRNLFVHTYDDSIAEEAVSLIKGKFFPML CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCHHHHHH AQCVENLNMMAEKED HHHHHHHHHHHCCCC >Mature Secondary Structure MNDNLRWKQRLQNLNKAFSRLRHACTLPEYNELEMAGLVQTYEFTFELCWKTLKDKLVYD CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GYSVNSPREAIRQAFGADLIGHIDCWLQALESRNLFVHTYDDSIAEEAVSLIKGKFFPML CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCHHHHHH AQCVENLNMMAEKED HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA