Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736192

Identifier: 187736192

GI number: 187736192

Start: 2071161

End: 2071631

Strand: Direct

Name: 187736192

Synonym: Amuc_1705

Alternate gene names: NA

Gene position: 2071161-2071631 (Clockwise)

Preceding gene: 187736178

Following gene: 187736193

Centisome position: 77.74

GC content: 54.56

Gene sequence:

>471_bases
ATGCTCTATATGGATAAAATACGTCAACGACTTTCCGACCTTGGTTACGCCATTTACGATGCTCCCGCTCCCGTAGGCTC
CTATGTGCAATGCGTACGCACGGGCAACCTGCTTCACCTCTCCGGCGGCATTTCCGTGAACGGGGACGACAAATACTTTG
GCAAAGTAGGGCAGGAGCTGACGGTGGAAGAAGGTCAGGCCGCTGCGCGCGCCGCTATTTTGAATCGTCTGGCCGTTATT
GTGCAGGTGGTGGGGTCTCTGGAAAAAGTATCCCGAATCGTGGCCGTGAACGGATTTGTGAATGCCGGCCCGGATTTTTA
TGACCATCCTAAAGTATTGAATGGCGCATCCGACCTGCTGGTGGAAGCCTTTGGAGAAATTGGCCGCCACAGCCGTACGG
CGGTAGGCGTATCCGCCCTGCCGCTCAATGTAGCGGTGGAAATCAGCATGGTGGTGGAAGTTCGTGATTAA

Upstream 100 bases:

>100_bases
ATTTTACGTGCAAACAGACCGAAAATTGTTCAAAATGTCATGAAAGGCATCTGGAAATGCAACTATTTCCGGTGTATCCT
TTCAACTCAACTTCTGTCAA

Downstream 100 bases:

>100_bases
TATTTAAAAACCGGAAGGGATTCGTGCTTGAATCCCGGCGGCATTCCTGTAGAGTGCCGTCCGGTCAATGCCCCCGTGGC
GGAATGGTAGACGCTGCAGA

Product: Endoribonuclease L-PSP

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-Psp; Endoribonuclease; Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; Transcriptional Regulator; Transcription Regulator; Endoribonuclease Family Protein; Endoribonuclease L-PSP Family; Translation Initiation Inhibitor Protein YjgF Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Creatininase; Translation Initiation Inhibitor YjgF; L-PSP Family Endoribonuclease; YjgF Family Translation Initiation Inhibitor; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MLYMDKIRQRLSDLGYAIYDAPAPVGSYVQCVRTGNLLHLSGGISVNGDDKYFGKVGQELTVEEGQAAARAAILNRLAVI
VQVVGSLEKVSRIVAVNGFVNAGPDFYDHPKVLNGASDLLVEAFGEIGRHSRTAVGVSALPLNVAVEISMVVEVRD

Sequences:

>Translated_156_residues
MLYMDKIRQRLSDLGYAIYDAPAPVGSYVQCVRTGNLLHLSGGISVNGDDKYFGKVGQELTVEEGQAAARAAILNRLAVI
VQVVGSLEKVSRIVAVNGFVNAGPDFYDHPKVLNGASDLLVEAFGEIGRHSRTAVGVSALPLNVAVEISMVVEVRD
>Mature_156_residues
MLYMDKIRQRLSDLGYAIYDAPAPVGSYVQCVRTGNLLHLSGGISVNGDDKYFGKVGQELTVEEGQAAARAAILNRLAVI
VQVVGSLEKVSRIVAVNGFVNAGPDFYDHPKVLNGASDLLVEAFGEIGRHSRTAVGVSALPLNVAVEISMVVEVRD

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16641; Mature: 16641

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYMDKIRQRLSDLGYAIYDAPAPVGSYVQCVRTGNLLHLSGGISVNGDDKYFGKVGQEL
CCCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCEEEECCCEEECCCCHHHHHCCCEE
TVEEGQAAARAAILNRLAVIVQVVGSLEKVSRIVAVNGFVNAGPDFYDHPKVLNGASDLL
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCHHHHH
VEAFGEIGRHSRTAVGVSALPLNVAVEISMVVEVRD
HHHHHHHCCCCCCCCCEEECCEEEEEEEEEEEEECC
>Mature Secondary Structure
MLYMDKIRQRLSDLGYAIYDAPAPVGSYVQCVRTGNLLHLSGGISVNGDDKYFGKVGQEL
CCCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCEEEECCCEEECCCCHHHHHCCCEE
TVEEGQAAARAAILNRLAVIVQVVGSLEKVSRIVAVNGFVNAGPDFYDHPKVLNGASDLL
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCHHHHH
VEAFGEIGRHSRTAVGVSALPLNVAVEISMVVEVRD
HHHHHHHCCCCCCCCCEEECCEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA