Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187736147

Identifier: 187736147

GI number: 187736147

Start: 2006208

End: 2007308

Strand: Reverse

Name: 187736147

Synonym: Amuc_1659

Alternate gene names: NA

Gene position: 2007308-2006208 (Counterclockwise)

Preceding gene: 187736148

Following gene: 187736144

Centisome position: 75.35

GC content: 55.22

Gene sequence:

>1101_bases
ATGAACATGAAAAAAGCACCGAATACAAACAAATTGAAATATGTCGGAGCCGCACTTCTGGAGGGGGAATCAGTCACCCT
GATCCAGGCTGCAAGGCTGGTATTAGAAATCAAGGAAGCCCTTGGAGATGAAATCTGTACCATTACCCGGTGCCGGGAAG
TCGTCTCCCTGGGATTGAACGCCATTAAAAACAAACATCAAACCGTCAGTTTCGGCACGGCGGCCGTGGAATGCCTGCGT
TCCAAAAGCCACCGCCGTCCCCGGACGCTGACGGACATCAGGAGCATCATCCACAAGCTTAAAAAGAGCAATCCGGAACT
GGAACACACCTCCCTGCGCAACCTGAGCGTGGAGGAATGCCAGAACATCCTGATGAATACCTTTACCACATCCCGGCAGA
GGCACAAAGCGAGGCTCATCTTGAGCGGAATTTTCTCGTTCTCCGTCAAACGCGGATGGTGTGACGAGAATCCCATCCTC
CGTGTAGACACGCCTTTTCTGCAGGAGCAGGAAATCCCCGCTCTGACGCTGAAGGAAATAACTCAGCTTCTCAAGGCGGC
CATGGAAGAATTTGACGGAAGCTGCGCAGCTGGAGCGGCGCTGATGATCTTTGCAGGAATCCGCCCGCAGGAAGTGGAAC
GCCTGCTCTGGGAAAACATCGCTCTCCGCGACGGCTGTATCATTCTGAACTCCAAGCATACCAAAACCGGAGGCGCCAGA
CACGTCACCATCCTGCCCGTGCTCGCCAAATGGCTCAAATTCTGCCGTGACAGGACCAAACCCGGCCCCGGAACTCCCAT
CTGCCCGAAAGGGTGGACAATCAAGTGGCGCAAAATCCGGAAAAAAGCCGGCTGGGGAGGAAGAAAAAAATCATGGGTGC
CGGACTGCCTGCGGCACACCTACGCCAGCTACCACGCCAAGCACTTCAAGGACTACAACCTGTTGCAAATGGAAATGGGG
CACCGCTCCTCCTCCCTGCTCCGCACACGGTACTTGAACATGAAAGGCATCTCTCCGCAAACGGCCACGCGCTTCTGGGC
CCTGACGCCAGCCAAGGTCATTGAAGAAACGAAACCGCCGGAAGAACCGCCGGTCTCCTGA

Upstream 100 bases:

>100_bases
ATATCCTTGACGGTTACGCGTTTTCTAGTGGAAAGCATAAGTTTTCCCCATTATAAGGATAGCCTTTTTCATTAAAACCG
TGTTTGGACAAACACGAGAA

Downstream 100 bases:

>100_bases
TCCGCAACAAAGGAAAACGCGCCGGCACGGGACAAACGCTCCCTGTTGAAGCAAAAGACAAGACCGTTTCCTACAGTTCG
TAATAAGTGTATCCATTCAA

Product: integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MNMKKAPNTNKLKYVGAALLEGESVTLIQAARLVLEIKEALGDEICTITRCREVVSLGLNAIKNKHQTVSFGTAAVECLR
SKSHRRPRTLTDIRSIIHKLKKSNPELEHTSLRNLSVEECQNILMNTFTTSRQRHKARLILSGIFSFSVKRGWCDENPIL
RVDTPFLQEQEIPALTLKEITQLLKAAMEEFDGSCAAGAALMIFAGIRPQEVERLLWENIALRDGCIILNSKHTKTGGAR
HVTILPVLAKWLKFCRDRTKPGPGTPICPKGWTIKWRKIRKKAGWGGRKKSWVPDCLRHTYASYHAKHFKDYNLLQMEMG
HRSSSLLRTRYLNMKGISPQTATRFWALTPAKVIEETKPPEEPPVS

Sequences:

>Translated_366_residues
MNMKKAPNTNKLKYVGAALLEGESVTLIQAARLVLEIKEALGDEICTITRCREVVSLGLNAIKNKHQTVSFGTAAVECLR
SKSHRRPRTLTDIRSIIHKLKKSNPELEHTSLRNLSVEECQNILMNTFTTSRQRHKARLILSGIFSFSVKRGWCDENPIL
RVDTPFLQEQEIPALTLKEITQLLKAAMEEFDGSCAAGAALMIFAGIRPQEVERLLWENIALRDGCIILNSKHTKTGGAR
HVTILPVLAKWLKFCRDRTKPGPGTPICPKGWTIKWRKIRKKAGWGGRKKSWVPDCLRHTYASYHAKHFKDYNLLQMEMG
HRSSSLLRTRYLNMKGISPQTATRFWALTPAKVIEETKPPEEPPVS
>Mature_366_residues
MNMKKAPNTNKLKYVGAALLEGESVTLIQAARLVLEIKEALGDEICTITRCREVVSLGLNAIKNKHQTVSFGTAAVECLR
SKSHRRPRTLTDIRSIIHKLKKSNPELEHTSLRNLSVEECQNILMNTFTTSRQRHKARLILSGIFSFSVKRGWCDENPIL
RVDTPFLQEQEIPALTLKEITQLLKAAMEEFDGSCAAGAALMIFAGIRPQEVERLLWENIALRDGCIILNSKHTKTGGAR
HVTILPVLAKWLKFCRDRTKPGPGTPICPKGWTIKWRKIRKKAGWGGRKKSWVPDCLRHTYASYHAKHFKDYNLLQMEMG
HRSSSLLRTRYLNMKGISPQTATRFWALTPAKVIEETKPPEEPPVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41439; Mature: 41439

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMKKAPNTNKLKYVGAALLEGESVTLIQAARLVLEIKEALGDEICTITRCREVVSLGLN
CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
AIKNKHQTVSFGTAAVECLRSKSHRRPRTLTDIRSIIHKLKKSNPELEHTSLRNLSVEEC
HHHCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHH
QNILMNTFTTSRQRHKARLILSGIFSFSVKRGWCDENPILRVDTPFLQEQEIPALTLKEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHH
TQLLKAAMEEFDGSCAAGAALMIFAGIRPQEVERLLWENIALRDGCIILNSKHTKTGGAR
HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
HVTILPVLAKWLKFCRDRTKPGPGTPICPKGWTIKWRKIRKKAGWGGRKKSWVPDCLRHT
EEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCHHHHHHHH
YASYHAKHFKDYNLLQMEMGHRSSSLLRTRYLNMKGISPQTATRFWALTPAKVIEETKPP
HHHHHHHHCCCCCEEEHHHCCCHHHHHHHHHCCCCCCCCHHHHHEEECCHHHHHHCCCCC
EEPPVS
CCCCCC
>Mature Secondary Structure
MNMKKAPNTNKLKYVGAALLEGESVTLIQAARLVLEIKEALGDEICTITRCREVVSLGLN
CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
AIKNKHQTVSFGTAAVECLRSKSHRRPRTLTDIRSIIHKLKKSNPELEHTSLRNLSVEEC
HHHCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHH
QNILMNTFTTSRQRHKARLILSGIFSFSVKRGWCDENPILRVDTPFLQEQEIPALTLKEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHH
TQLLKAAMEEFDGSCAAGAALMIFAGIRPQEVERLLWENIALRDGCIILNSKHTKTGGAR
HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
HVTILPVLAKWLKFCRDRTKPGPGTPICPKGWTIKWRKIRKKAGWGGRKKSWVPDCLRHT
EEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCHHHHHHHH
YASYHAKHFKDYNLLQMEMGHRSSSLLRTRYLNMKGISPQTATRFWALTPAKVIEETKPP
HHHHHHHHCCCCCEEEHHHCCCHHHHHHHHHCCCCCCCCHHHHHEEECCHHHHHHCCCCC
EEPPVS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA