Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736148
Identifier: 187736148
GI number: 187736148
Start: 2008501
End: 2009148
Strand: Reverse
Name: 187736148
Synonym: Amuc_1661
Alternate gene names: NA
Gene position: 2009148-2008501 (Counterclockwise)
Preceding gene: 187736149
Following gene: 187736147
Centisome position: 75.42
GC content: 30.09
Gene sequence:
>648_bases ATGCTTTCCTCTGATTATTTATCACGTATAGAGAATCTCTATACGACATATAATAATACTATCAAATTATTGATAGCGGA TATAGAAGCGAAATACGAAAAATTTCCTATAGAACTTTTTAATGAAATTCGTGCTTTACATGACCATATAGCTAGATGCT ATATTCCTGATTTAAAGCCCGAAACTATTAAAGATGAAATTGCAAAAGCGGAAGGACATATTTGGAGAATAATTTTGGAT TGTTATAAATACCTTAATATTCATTTATCTGATTATGTTAAAAATTTTGAGAAAAGGACTAAGCGTGTCGATTTATTTGT AGTAGATAATGGACAATTTTACGTCACTTACAAAAAATTGCACAATGAAGCTATTTTCTCAGTTAGAGAGGCTAAAAAAA TAGAAGGAATCGATAAAACAAAATCTCTGAAAAAATACGAAGACGCCTATAATCAATATACTGAGCTATACGACCATATT AATTCTAAAATATCAGATATTAATTGGGCAAAAAGGAAATATTGTGTTAAATTTGGTTTGAAGGCTTTACTGTGGATTGC TTCGGTGATTCTTTCTTCTCTCATTACTATTTCAGTCGGTTGTCCGAAATTACAAAGTATTGTTGAAGGCGTTATCGCTT GCTTTTAA
Upstream 100 bases:
>100_bases AAACGCAATAGATTTCCACTAGTTGGAAGAGGTTCTGTATATTTAGCTCTTTCAAGATTTTTAAGATTTAATCTTGATAA AAAAATAGCTAAAATATAAA
Downstream 100 bases:
>100_bases AGGCAATGACATTTTTCAATATTGTTTCTTCCAAAGACGTATGTTACACTATCGTGTAGTATGTATAACACACGCACTTT TGAACTACACGATAGTGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MLSSDYLSRIENLYTTYNNTIKLLIADIEAKYEKFPIELFNEIRALHDHIARCYIPDLKPETIKDEIAKAEGHIWRIILD CYKYLNIHLSDYVKNFEKRTKRVDLFVVDNGQFYVTYKKLHNEAIFSVREAKKIEGIDKTKSLKKYEDAYNQYTELYDHI NSKISDINWAKRKYCVKFGLKALLWIASVILSSLITISVGCPKLQSIVEGVIACF
Sequences:
>Translated_215_residues MLSSDYLSRIENLYTTYNNTIKLLIADIEAKYEKFPIELFNEIRALHDHIARCYIPDLKPETIKDEIAKAEGHIWRIILD CYKYLNIHLSDYVKNFEKRTKRVDLFVVDNGQFYVTYKKLHNEAIFSVREAKKIEGIDKTKSLKKYEDAYNQYTELYDHI NSKISDINWAKRKYCVKFGLKALLWIASVILSSLITISVGCPKLQSIVEGVIACF >Mature_215_residues MLSSDYLSRIENLYTTYNNTIKLLIADIEAKYEKFPIELFNEIRALHDHIARCYIPDLKPETIKDEIAKAEGHIWRIILD CYKYLNIHLSDYVKNFEKRTKRVDLFVVDNGQFYVTYKKLHNEAIFSVREAKKIEGIDKTKSLKKYEDAYNQYTELYDHI NSKISDINWAKRKYCVKFGLKALLWIASVILSSLITISVGCPKLQSIVEGVIACF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25175; Mature: 25175
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSSDYLSRIENLYTTYNNTIKLLIADIEAKYEKFPIELFNEIRALHDHIARCYIPDLKP CCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC ETIKDEIAKAEGHIWRIILDCYKYLNIHLSDYVKNFEKRTKRVDLFVVDNGQFYVTYKKL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEEEHHHH HNEAIFSVREAKKIEGIDKTKSLKKYEDAYNQYTELYDHINSKISDINWAKRKYCVKFGL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH KALLWIASVILSSLITISVGCPKLQSIVEGVIACF HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MLSSDYLSRIENLYTTYNNTIKLLIADIEAKYEKFPIELFNEIRALHDHIARCYIPDLKP CCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC ETIKDEIAKAEGHIWRIILDCYKYLNIHLSDYVKNFEKRTKRVDLFVVDNGQFYVTYKKL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEEEHHHH HNEAIFSVREAKKIEGIDKTKSLKKYEDAYNQYTELYDHINSKISDINWAKRKYCVKFGL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH KALLWIASVILSSLITISVGCPKLQSIVEGVIACF HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA