Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736148

Identifier: 187736148

GI number: 187736148

Start: 2008501

End: 2009148

Strand: Reverse

Name: 187736148

Synonym: Amuc_1661

Alternate gene names: NA

Gene position: 2009148-2008501 (Counterclockwise)

Preceding gene: 187736149

Following gene: 187736147

Centisome position: 75.42

GC content: 30.09

Gene sequence:

>648_bases
ATGCTTTCCTCTGATTATTTATCACGTATAGAGAATCTCTATACGACATATAATAATACTATCAAATTATTGATAGCGGA
TATAGAAGCGAAATACGAAAAATTTCCTATAGAACTTTTTAATGAAATTCGTGCTTTACATGACCATATAGCTAGATGCT
ATATTCCTGATTTAAAGCCCGAAACTATTAAAGATGAAATTGCAAAAGCGGAAGGACATATTTGGAGAATAATTTTGGAT
TGTTATAAATACCTTAATATTCATTTATCTGATTATGTTAAAAATTTTGAGAAAAGGACTAAGCGTGTCGATTTATTTGT
AGTAGATAATGGACAATTTTACGTCACTTACAAAAAATTGCACAATGAAGCTATTTTCTCAGTTAGAGAGGCTAAAAAAA
TAGAAGGAATCGATAAAACAAAATCTCTGAAAAAATACGAAGACGCCTATAATCAATATACTGAGCTATACGACCATATT
AATTCTAAAATATCAGATATTAATTGGGCAAAAAGGAAATATTGTGTTAAATTTGGTTTGAAGGCTTTACTGTGGATTGC
TTCGGTGATTCTTTCTTCTCTCATTACTATTTCAGTCGGTTGTCCGAAATTACAAAGTATTGTTGAAGGCGTTATCGCTT
GCTTTTAA

Upstream 100 bases:

>100_bases
AAACGCAATAGATTTCCACTAGTTGGAAGAGGTTCTGTATATTTAGCTCTTTCAAGATTTTTAAGATTTAATCTTGATAA
AAAAATAGCTAAAATATAAA

Downstream 100 bases:

>100_bases
AGGCAATGACATTTTTCAATATTGTTTCTTCCAAAGACGTATGTTACACTATCGTGTAGTATGTATAACACACGCACTTT
TGAACTACACGATAGTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MLSSDYLSRIENLYTTYNNTIKLLIADIEAKYEKFPIELFNEIRALHDHIARCYIPDLKPETIKDEIAKAEGHIWRIILD
CYKYLNIHLSDYVKNFEKRTKRVDLFVVDNGQFYVTYKKLHNEAIFSVREAKKIEGIDKTKSLKKYEDAYNQYTELYDHI
NSKISDINWAKRKYCVKFGLKALLWIASVILSSLITISVGCPKLQSIVEGVIACF

Sequences:

>Translated_215_residues
MLSSDYLSRIENLYTTYNNTIKLLIADIEAKYEKFPIELFNEIRALHDHIARCYIPDLKPETIKDEIAKAEGHIWRIILD
CYKYLNIHLSDYVKNFEKRTKRVDLFVVDNGQFYVTYKKLHNEAIFSVREAKKIEGIDKTKSLKKYEDAYNQYTELYDHI
NSKISDINWAKRKYCVKFGLKALLWIASVILSSLITISVGCPKLQSIVEGVIACF
>Mature_215_residues
MLSSDYLSRIENLYTTYNNTIKLLIADIEAKYEKFPIELFNEIRALHDHIARCYIPDLKPETIKDEIAKAEGHIWRIILD
CYKYLNIHLSDYVKNFEKRTKRVDLFVVDNGQFYVTYKKLHNEAIFSVREAKKIEGIDKTKSLKKYEDAYNQYTELYDHI
NSKISDINWAKRKYCVKFGLKALLWIASVILSSLITISVGCPKLQSIVEGVIACF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25175; Mature: 25175

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSDYLSRIENLYTTYNNTIKLLIADIEAKYEKFPIELFNEIRALHDHIARCYIPDLKP
CCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
ETIKDEIAKAEGHIWRIILDCYKYLNIHLSDYVKNFEKRTKRVDLFVVDNGQFYVTYKKL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEEEHHHH
HNEAIFSVREAKKIEGIDKTKSLKKYEDAYNQYTELYDHINSKISDINWAKRKYCVKFGL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KALLWIASVILSSLITISVGCPKLQSIVEGVIACF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSSDYLSRIENLYTTYNNTIKLLIADIEAKYEKFPIELFNEIRALHDHIARCYIPDLKP
CCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
ETIKDEIAKAEGHIWRIILDCYKYLNIHLSDYVKNFEKRTKRVDLFVVDNGQFYVTYKKL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEEEHHHH
HNEAIFSVREAKKIEGIDKTKSLKKYEDAYNQYTELYDHINSKISDINWAKRKYCVKFGL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KALLWIASVILSSLITISVGCPKLQSIVEGVIACF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA