Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736144
Identifier: 187736144
GI number: 187736144
Start: 2002006
End: 2002797
Strand: Reverse
Name: 187736144
Synonym: Amuc_1656
Alternate gene names: NA
Gene position: 2002797-2002006 (Counterclockwise)
Preceding gene: 187736147
Following gene: 187736142
Centisome position: 75.18
GC content: 57.7
Gene sequence:
>792_bases ATGGGATGTATTTTCCTCTTTTATAACGTAACCATTGCGATTGCCATGACTAACATTCATCCCTTCACTACTGCAGCAGC CTGCATCCTGACCGCCGGAGCAGCGCTCTTCACCAGCTCTTGCCAACCTGCCTCTCCCGAGAGCTATGCCCGTCAATTTG CTACTGCCCAGCACGTATCCGTGCACGGCTACAATGGCCGTGAAACGCTGACCTCCCGGGTTTACGCTGACTGGGGCAGC ATGCCGGCCAATGCGCGCCGCGCCATGGAGGAATACATCAAGGGCGCTGAATGGAAAACGATGGACTACATCCGCCCGCA GTACTTCATCCAGGTAGACCGCTCTTTCTGGGCGATCTGCATTGACAATGACGGCAACATGACAGGCATCATTCCCTTCC GCAATGGCAAGGACGCCCGCAAGATGTCCGTCAACAACCACTTCAAGATGCTGGTCAACACGACGGACCGGGCTCCCGCC CTGGGCTATGCCATCCTGAAAAACCTGGCTTATGCTGACGGACTCCGCGTCAGCACCCGCAAGGCTGACGGTCTGGAAAC TCCCGTTCCCGCCCCTCCGGCCATGAAAGTCGTTGTTCCGCCCAAGGGAGCTGCTCCGTCCGCAGTGCCCGCTGCCAAAT CCGCAGCAACGTCCGTTTCTGAACCAGGCGCTACGGAAGAAACTCCTGCCGACGATACTGCCGGAACGGAAGAGGAGCCC TCTGCGGACAGCGCTGCTGAAAGCGAAGATACCACGACAACGGATGATGCCGCTGTCACCGACGATTTTTAA
Upstream 100 bases:
>100_bases GGGCATGAGAACGCCTTCCCCACTCCCGCCAGCCCCCCGCATCAAACGGAAACGTCAAAAAACGGCACAAAACGGTACCT CCTGCATTCTTTTCCTTGAA
Downstream 100 bases:
>100_bases ACCCTCCCTTTCAGGGAACTTCGTTATTTAACCTCTGTCACGCCCCGACGCCATATCCGTCGGGGCGTTTTTTATCCCTC CCGAACCAGTTCCCTTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MGCIFLFYNVTIAIAMTNIHPFTTAAACILTAGAALFTSSCQPASPESYARQFATAQHVSVHGYNGRETLTSRVYADWGS MPANARRAMEEYIKGAEWKTMDYIRPQYFIQVDRSFWAICIDNDGNMTGIIPFRNGKDARKMSVNNHFKMLVNTTDRAPA LGYAILKNLAYADGLRVSTRKADGLETPVPAPPAMKVVVPPKGAAPSAVPAAKSAATSVSEPGATEETPADDTAGTEEEP SADSAAESEDTTTTDDAAVTDDF
Sequences:
>Translated_263_residues MGCIFLFYNVTIAIAMTNIHPFTTAAACILTAGAALFTSSCQPASPESYARQFATAQHVSVHGYNGRETLTSRVYADWGS MPANARRAMEEYIKGAEWKTMDYIRPQYFIQVDRSFWAICIDNDGNMTGIIPFRNGKDARKMSVNNHFKMLVNTTDRAPA LGYAILKNLAYADGLRVSTRKADGLETPVPAPPAMKVVVPPKGAAPSAVPAAKSAATSVSEPGATEETPADDTAGTEEEP SADSAAESEDTTTTDDAAVTDDF >Mature_262_residues GCIFLFYNVTIAIAMTNIHPFTTAAACILTAGAALFTSSCQPASPESYARQFATAQHVSVHGYNGRETLTSRVYADWGSM PANARRAMEEYIKGAEWKTMDYIRPQYFIQVDRSFWAICIDNDGNMTGIIPFRNGKDARKMSVNNHFKMLVNTTDRAPAL GYAILKNLAYADGLRVSTRKADGLETPVPAPPAMKVVVPPKGAAPSAVPAAKSAATSVSEPGATEETPADDTAGTEEEPS ADSAAESEDTTTTDDAAVTDDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28162; Mature: 28030
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCIFLFYNVTIAIAMTNIHPFTTAAACILTAGAALFTSSCQPASPESYARQFATAQHVS CCEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEE VHGYNGRETLTSRVYADWGSMPANARRAMEEYIKGAEWKTMDYIRPQYFIQVDRSFWAIC EECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEECCEEEEE IDNDGNMTGIIPFRNGKDARKMSVNNHFKMLVNTTDRAPALGYAILKNLAYADGLRVSTR ECCCCCEEEEEEECCCCCHHEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEECC KADGLETPVPAPPAMKVVVPPKGAAPSAVPAAKSAATSVSEPGATEETPADDTAGTEEEP CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SADSAAESEDTTTTDDAAVTDDF CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GCIFLFYNVTIAIAMTNIHPFTTAAACILTAGAALFTSSCQPASPESYARQFATAQHVS CEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEE VHGYNGRETLTSRVYADWGSMPANARRAMEEYIKGAEWKTMDYIRPQYFIQVDRSFWAIC EECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEECCEEEEE IDNDGNMTGIIPFRNGKDARKMSVNNHFKMLVNTTDRAPALGYAILKNLAYADGLRVSTR ECCCCCEEEEEEECCCCCHHEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEECC KADGLETPVPAPPAMKVVVPPKGAAPSAVPAAKSAATSVSEPGATEETPADDTAGTEEEP CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SADSAAESEDTTTTDDAAVTDDF CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA