Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736139
Identifier: 187736139
GI number: 187736139
Start: 1994441
End: 1995274
Strand: Direct
Name: 187736139
Synonym: Amuc_1651
Alternate gene names: NA
Gene position: 1994441-1995274 (Clockwise)
Preceding gene: 187736138
Following gene: 187736140
Centisome position: 74.86
GC content: 45.56
Gene sequence:
>834_bases ATGAAAAGATATTGTCTGGTTTACGGGTTATGTTTGTGCCTGTTCATGGGGATATTTTCATGTATTCCGGAAGCTCCGGA GCATAAGACGGAAAAAGATGCCTCAGCCATTGTTCTGGATGAGGATTCGGATATAATCTGGAGGAATTTTTCTTTGGGCC GCATTTCATTCGATGATAAGGCTCCGCATAGTAAAGGTTCCCGCATTTTTCGCCGATTGATTCCAGATACGGAGGTTTAT ATCCGTCAGTTGTCCCGTATTGTTCTCCATACGTTGTATGAGAGTCCTGAAGAATATATTATTCCTGTCCACCATTTGCG TTTCATGCTGGAGGATACCGATGGAGTTGCCTGCAAATGGGGAGGAAATGGAGAGGTTGCCATTTCCTGCAGCACGCGCC ATATTGAGAGTTTGTTTAAAGATGATGATGATGCGGCGAAGGTTTATTTTGAAATTCGAGGAGTCTTGTTGCATGAGCTA ACCCATGTTTACCAACAGGAACCCCAGGGGATAGGTTCCTATGGAACGAACAGGGAATTTAGAGCATTTATCGAGGGGAT GGCTGATGCCGTTCGTATAGCTAACGGGGGATTCCATAGAGGAGCCTACCGTCCTACGGGCGGCAGTTATATGGATGGCT ACCTCCATGCAGGTTATTTTTTTGTGTGGCTGCGGGATTATAAAGACCCTGAATTTCTACGCAAATTTAACCGTAGTGCT CTTGAGGTCGTTCCATGGTCGTTTGATGGCGCCGTTAAATATGCCTTGGGCAGCGAGTATCATATTGATGAGTTGTGGCG GGAGTATCAAAGGGTGATGGAAGAGGAAAAATAG
Upstream 100 bases:
>100_bases GATGGATTTTTGTGTTTTTTGTTGAATGCAATATTTTGACGGAGGAAGTTGGTTTTTCGGCTGATAGAGGAGAAATGACG GGAAGTATTATTGGACGAAT
Downstream 100 bases:
>100_bases AGGCGCTTCATAGTTCAGGAGTTTTGATGGGATATCTAGACAGGAGGCTGGAATAGAAGGAATGGCCGTGGAGAGCGTTC TTAAGGCGTGGGTATTTCTC
Product: Basic Secretory Protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKRYCLVYGLCLCLFMGIFSCIPEAPEHKTEKDASAIVLDEDSDIIWRNFSLGRISFDDKAPHSKGSRIFRRLIPDTEVY IRQLSRIVLHTLYESPEEYIIPVHHLRFMLEDTDGVACKWGGNGEVAISCSTRHIESLFKDDDDAAKVYFEIRGVLLHEL THVYQQEPQGIGSYGTNREFRAFIEGMADAVRIANGGFHRGAYRPTGGSYMDGYLHAGYFFVWLRDYKDPEFLRKFNRSA LEVVPWSFDGAVKYALGSEYHIDELWREYQRVMEEEK
Sequences:
>Translated_277_residues MKRYCLVYGLCLCLFMGIFSCIPEAPEHKTEKDASAIVLDEDSDIIWRNFSLGRISFDDKAPHSKGSRIFRRLIPDTEVY IRQLSRIVLHTLYESPEEYIIPVHHLRFMLEDTDGVACKWGGNGEVAISCSTRHIESLFKDDDDAAKVYFEIRGVLLHEL THVYQQEPQGIGSYGTNREFRAFIEGMADAVRIANGGFHRGAYRPTGGSYMDGYLHAGYFFVWLRDYKDPEFLRKFNRSA LEVVPWSFDGAVKYALGSEYHIDELWREYQRVMEEEK >Mature_277_residues MKRYCLVYGLCLCLFMGIFSCIPEAPEHKTEKDASAIVLDEDSDIIWRNFSLGRISFDDKAPHSKGSRIFRRLIPDTEVY IRQLSRIVLHTLYESPEEYIIPVHHLRFMLEDTDGVACKWGGNGEVAISCSTRHIESLFKDDDDAAKVYFEIRGVLLHEL THVYQQEPQGIGSYGTNREFRAFIEGMADAVRIANGGFHRGAYRPTGGSYMDGYLHAGYFFVWLRDYKDPEFLRKFNRSA LEVVPWSFDGAVKYALGSEYHIDELWREYQRVMEEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32094; Mature: 32094
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYCLVYGLCLCLFMGIFSCIPEAPEHKTEKDASAIVLDEDSDIIWRNFSLGRISFDDK CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEECCCC APHSKGSRIFRRLIPDTEVYIRQLSRIVLHTLYESPEEYIIPVHHLRFMLEDTDGVACKW CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHEEEEECCCCEEEEE GGNGEVAISCSTRHIESLFKDDDDAAKVYFEIRGVLLHELTHVYQQEPQGIGSYGTNREF CCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH RAFIEGMADAVRIANGGFHRGAYRPTGGSYMDGYLHAGYFFVWLRDYKDPEFLRKFNRSA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCEEEEEEECCCCHHHHHHHCCCC LEVVPWSFDGAVKYALGSEYHIDELWREYQRVMEEEK EEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRYCLVYGLCLCLFMGIFSCIPEAPEHKTEKDASAIVLDEDSDIIWRNFSLGRISFDDK CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEECCCC APHSKGSRIFRRLIPDTEVYIRQLSRIVLHTLYESPEEYIIPVHHLRFMLEDTDGVACKW CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHEEEEECCCCEEEEE GGNGEVAISCSTRHIESLFKDDDDAAKVYFEIRGVLLHELTHVYQQEPQGIGSYGTNREF CCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH RAFIEGMADAVRIANGGFHRGAYRPTGGSYMDGYLHAGYFFVWLRDYKDPEFLRKFNRSA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCEEEEEEECCCCHHHHHHHCCCC LEVVPWSFDGAVKYALGSEYHIDELWREYQRVMEEEK EEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA