Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is gspD [C]

Identifier: 187736127

GI number: 187736127

Start: 1979170

End: 1981671

Strand: Direct

Name: gspD [C]

Synonym: Amuc_1638

Alternate gene names: 187736127

Gene position: 1979170-1981671 (Clockwise)

Preceding gene: 187736126

Following gene: 187736128

Centisome position: 74.29

GC content: 57.11

Gene sequence:

>2502_bases
ATGTCTGCCATTCAGCAAATTGCCATGGCGCTTGCCGTTGCCGGTATTGGAGCCGGCCAGGGGCTGGCCCAGGAGGGGGC
AGGGGCCGCACGCCGGGCAGCAGCCCGGATGGAAGAGCAGGCTCAGGCTTCCATGCTGCTGTTAGGGCAGGCGCGTCAGC
AATATTCCGAGGGCAAGTACCAGGAAGCTCTGGACAATTACCGCAGAAGCCTGACTGCGCTGCCCAAATCCCCCAATATG
GAGAAGCGCCGCCGTTTCCTGGAAACCAGCATCGCGGATGCCAGTGTGGCTGTGGCTCAGGAATATATCAAGGCGGGGCG
TTACGATGAGGCCGTCAAGTTGCTGGAAGATGCCCTGAAATCCACTCCGGACCATGCCTTGGCCAGGCGCACGTTGGAAA
TAGCCCGCGACCCGGTGCGTACGAATCCGGCATTGTCTCCGGAACACGTAAAAAATGTAGAGGAAGTCAACCGTCTGCTT
CACCTGGCTTTCGGCTATTATGAACTGGGCCAGTATGATGCGGCCCTGAAGGAATTTACGTCCGTCCTTAAGACGGACCC
TTACAATACGGCGGCGCGGCGCGGCATGGAACTGGTTAACCGCGCCAGAACCGCCTATTTTAGCGCTGCCAGGGATGAAA
CCCGCAGCAGTGCCCTGGCGGATGTTTCCAGACAGTGGGAGATGCCCGTTCCTTTGACGGAAACACCGGAGGAACCCGCT
TCATTTTCCCGGCCGCTGGATAACCCGGTGGTGAATGTGGACCAGAAACTAGGCATGATCCGCCTGCCCCGTGTGCAGCT
GGATGGAGCGACGGTGCAGGAAGCCGTGGACTATCTGCGCAGCCAGGCCAGGACGCATGATGCCACGGCCATGACTGCGG
CGGAACGCGGCGTGAATATTTCCGTGGATCCCGGTCCTGCAGACAGCGTTTCCGCCAGGGACGCCGCCGCCAAGAGAATT
ACGCTTAATCTTCAGAATGTACCTCTTCGTGAGGCCCTGGAATACGTGGCGCGCGCATCCGGCCTTATTCTGCGGACAAA
TGCCTTTGGTGCGGAACTGGTATCCAGTTCAGACGGAACTTCCTACATGGTCACCAAGTCCATTACCCTTCCGCCGGGCT
TCTTTTCCGGATTGTCGGAGGACTCTGGCGCCGAAAATTCAGACCCCTTCAGTTCCGGTGATTCCGGTTCTTCCGGCATG
ACCCTGAAACGGGTGGATCCGCAAAAGGCGCTGGCTTCCATGGGGGTGAAATTCCCGGAAGGCAGTTTCATTAAATACAA
CTCGGGCAACTCCACTCTTCTTTTCCATGGCACGCCCAGAGATTTGAGCATGCTGGAGGAGCTGGTAGCGGCCAGGACTG
CGGAACAGCCCCTCCAGGTGGTGGTCAGCGCGACCTTTCTGGAAGTCAATCAGACGGACTTGGAGGAATTGGGCTTTAAC
TGGATCGTCAATCTGAACCTGGACCCTACCAAGTGGTTCATGGGCGGCGCGGGAACCGATAAAAATGACTATAACAATTC
CGTGCTGGACAGCGCCGCCAATGTGGCCGGAGCCGTCGCTCCCGCAGGAGTGGTGGGCGGGCTGCGTTCCGGCAACCAGG
TTTTTACGGAAGATAGCATTGACAGCATGATAGAACGCGGCACTTCCGCCAGAAGTTCTGATGCGACCTATGTTCCCGGC
GGCGCTCCCAGCATCGTCACTCTGCGCGGCATGTGGAGTCACGCGGATATCACGATGATTATGCGCGGCCTGAGCCAGAA
AAAAGGCACAGACATTATGCAGCATCCTTCCGTGATTGTGCGCCCCGGTGAAAAAGCCACCTTTTTCAGCGGCAGGGAAC
TGATTTACCCTACGGAATATGATCCGCCTGAAGTTCCCAACAGCACGGGCAATAATAATGACTGGGGCGACAATGACAAT
AACGGCGGCGGTATTCCGGTCATGCCCATGACTCCCGCCCATCCCTCTGCCTTTGAAACCAGGCAGCTCGGCACGATCTT
CAATGTGGAAGTGACCGGCATCAGCGATGACAAATCCATCGTGGAAATGACCGTAGTGCCGGAAATCGTGGATTTTGACG
GTTTCATCAACTACGGCACGTCGCTTTTCGTTCCCATGGTCTCCCAGGAAAAGGACGCAAAGGAAGAAGTCGTCATGGTG
AAAACTTCAGACAACTTCATTCTTCAGCCCGTGTTTTCCACGCGGCGCCTGACCGCTCCGGTGCGCATAGCCACCGGCAA
TACGCTCGTCATCGGCGCCTTGAAAAAATCCACTTCCATTACGTATGAGGATAAAATTCCCGTTCTGGGGGATATTCCCT
GGGTGGGGCGTCTTTTCCGTTCCAAGGGGTCCAAGGAACAGCGCAAGGCCATCATCATCATGGTAAAGGCGGAAGTGGTG
GATCCGGGCGGCAAGAAGCTTTATACGCCGGATACTTCCATTCCGGACGATGAGGTCCCGGCAGGGGACGCTTCGCTCCC
CGCCCTCAGCAATGCCCAGTAA

Upstream 100 bases:

>100_bases
GCCGATATTTTTTACTCTGCTGGGCGTTTTTATGATGACGGGCGGTTTTTAATTCGGTATAGTCCCGGAAATTCCTATGA
CTAGACGTTTCCCTCACTCC

Downstream 100 bases:

>100_bases
CCTTTAACCGGATCAAGACCATTGAAAAACAGCGGTTCCGATTTTGAGTCTTCTCCGCCCCAGGGGGCTGATAATATCAT
GCGTCAGCTGCATGCGTCGG

Product: type II and III secretion system protein

Products: NA

Alternate protein names: Bacterial Type II And III Secretion System Protein

Number of amino acids: Translated: 833; Mature: 832

Protein sequence:

>833_residues
MSAIQQIAMALAVAGIGAGQGLAQEGAGAARRAAARMEEQAQASMLLLGQARQQYSEGKYQEALDNYRRSLTALPKSPNM
EKRRRFLETSIADASVAVAQEYIKAGRYDEAVKLLEDALKSTPDHALARRTLEIARDPVRTNPALSPEHVKNVEEVNRLL
HLAFGYYELGQYDAALKEFTSVLKTDPYNTAARRGMELVNRARTAYFSAARDETRSSALADVSRQWEMPVPLTETPEEPA
SFSRPLDNPVVNVDQKLGMIRLPRVQLDGATVQEAVDYLRSQARTHDATAMTAAERGVNISVDPGPADSVSARDAAAKRI
TLNLQNVPLREALEYVARASGLILRTNAFGAELVSSSDGTSYMVTKSITLPPGFFSGLSEDSGAENSDPFSSGDSGSSGM
TLKRVDPQKALASMGVKFPEGSFIKYNSGNSTLLFHGTPRDLSMLEELVAARTAEQPLQVVVSATFLEVNQTDLEELGFN
WIVNLNLDPTKWFMGGAGTDKNDYNNSVLDSAANVAGAVAPAGVVGGLRSGNQVFTEDSIDSMIERGTSARSSDATYVPG
GAPSIVTLRGMWSHADITMIMRGLSQKKGTDIMQHPSVIVRPGEKATFFSGRELIYPTEYDPPEVPNSTGNNNDWGDNDN
NGGGIPVMPMTPAHPSAFETRQLGTIFNVEVTGISDDKSIVEMTVVPEIVDFDGFINYGTSLFVPMVSQEKDAKEEVVMV
KTSDNFILQPVFSTRRLTAPVRIATGNTLVIGALKKSTSITYEDKIPVLGDIPWVGRLFRSKGSKEQRKAIIIMVKAEVV
DPGGKKLYTPDTSIPDDEVPAGDASLPALSNAQ

Sequences:

>Translated_833_residues
MSAIQQIAMALAVAGIGAGQGLAQEGAGAARRAAARMEEQAQASMLLLGQARQQYSEGKYQEALDNYRRSLTALPKSPNM
EKRRRFLETSIADASVAVAQEYIKAGRYDEAVKLLEDALKSTPDHALARRTLEIARDPVRTNPALSPEHVKNVEEVNRLL
HLAFGYYELGQYDAALKEFTSVLKTDPYNTAARRGMELVNRARTAYFSAARDETRSSALADVSRQWEMPVPLTETPEEPA
SFSRPLDNPVVNVDQKLGMIRLPRVQLDGATVQEAVDYLRSQARTHDATAMTAAERGVNISVDPGPADSVSARDAAAKRI
TLNLQNVPLREALEYVARASGLILRTNAFGAELVSSSDGTSYMVTKSITLPPGFFSGLSEDSGAENSDPFSSGDSGSSGM
TLKRVDPQKALASMGVKFPEGSFIKYNSGNSTLLFHGTPRDLSMLEELVAARTAEQPLQVVVSATFLEVNQTDLEELGFN
WIVNLNLDPTKWFMGGAGTDKNDYNNSVLDSAANVAGAVAPAGVVGGLRSGNQVFTEDSIDSMIERGTSARSSDATYVPG
GAPSIVTLRGMWSHADITMIMRGLSQKKGTDIMQHPSVIVRPGEKATFFSGRELIYPTEYDPPEVPNSTGNNNDWGDNDN
NGGGIPVMPMTPAHPSAFETRQLGTIFNVEVTGISDDKSIVEMTVVPEIVDFDGFINYGTSLFVPMVSQEKDAKEEVVMV
KTSDNFILQPVFSTRRLTAPVRIATGNTLVIGALKKSTSITYEDKIPVLGDIPWVGRLFRSKGSKEQRKAIIIMVKAEVV
DPGGKKLYTPDTSIPDDEVPAGDASLPALSNAQ
>Mature_832_residues
SAIQQIAMALAVAGIGAGQGLAQEGAGAARRAAARMEEQAQASMLLLGQARQQYSEGKYQEALDNYRRSLTALPKSPNME
KRRRFLETSIADASVAVAQEYIKAGRYDEAVKLLEDALKSTPDHALARRTLEIARDPVRTNPALSPEHVKNVEEVNRLLH
LAFGYYELGQYDAALKEFTSVLKTDPYNTAARRGMELVNRARTAYFSAARDETRSSALADVSRQWEMPVPLTETPEEPAS
FSRPLDNPVVNVDQKLGMIRLPRVQLDGATVQEAVDYLRSQARTHDATAMTAAERGVNISVDPGPADSVSARDAAAKRIT
LNLQNVPLREALEYVARASGLILRTNAFGAELVSSSDGTSYMVTKSITLPPGFFSGLSEDSGAENSDPFSSGDSGSSGMT
LKRVDPQKALASMGVKFPEGSFIKYNSGNSTLLFHGTPRDLSMLEELVAARTAEQPLQVVVSATFLEVNQTDLEELGFNW
IVNLNLDPTKWFMGGAGTDKNDYNNSVLDSAANVAGAVAPAGVVGGLRSGNQVFTEDSIDSMIERGTSARSSDATYVPGG
APSIVTLRGMWSHADITMIMRGLSQKKGTDIMQHPSVIVRPGEKATFFSGRELIYPTEYDPPEVPNSTGNNNDWGDNDNN
GGGIPVMPMTPAHPSAFETRQLGTIFNVEVTGISDDKSIVEMTVVPEIVDFDGFINYGTSLFVPMVSQEKDAKEEVVMVK
TSDNFILQPVFSTRRLTAPVRIATGNTLVIGALKKSTSITYEDKIPVLGDIPWVGRLFRSKGSKEQRKAIIIMVKAEVVD
PGGKKLYTPDTSIPDDEVPAGDASLPALSNAQ

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89970; Mature: 89839

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS00584 PFKB_KINASES_2 ; PS00800 PECTINESTERASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIQQIAMALAVAGIGAGQGLAQEGAGAARRAAARMEEQAQASMLLLGQARQQYSEGKY
CHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
QEALDNYRRSLTALPKSPNMEKRRRFLETSIADASVAVAQEYIKAGRYDEAVKLLEDALK
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
STPDHALARRTLEIARDPVRTNPALSPEHVKNVEEVNRLLHLAFGYYELGQYDAALKEFT
CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVLKTDPYNTAARRGMELVNRARTAYFSAARDETRSSALADVSRQWEMPVPLTETPEEPA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
SFSRPLDNPVVNVDQKLGMIRLPRVQLDGATVQEAVDYLRSQARTHDATAMTAAERGVNI
HHCCCCCCCCCCHHHHCCEEECCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCEE
SVDPGPADSVSARDAAAKRITLNLQNVPLREALEYVARASGLILRTNAFGAELVSSSDGT
EECCCCCCCCCHHHHCCEEEEEEECCCCHHHHHHHHHHHCCEEEEECCCCHHHHCCCCCC
SYMVTKSITLPPGFFSGLSEDSGAENSDPFSSGDSGSSGMTLKRVDPQKALASMGVKFPE
EEEEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCCCC
GSFIKYNSGNSTLLFHGTPRDLSMLEELVAARTAEQPLQVVVSATFLEVNQTDLEELGFN
CCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHCCCE
WIVNLNLDPTKWFMGGAGTDKNDYNNSVLDSAANVAGAVAPAGVVGGLRSGNQVFTEDSI
EEEEECCCCCHHEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEECHHHH
DSMIERGTSARSSDATYVPGGAPSIVTLRGMWSHADITMIMRGLSQKKGTDIMQHPSVIV
HHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHCCCEEE
RPGEKATFFSGRELIYPTEYDPPEVPNSTGNNNDWGDNDNNGGGIPVMPMTPAHPSAFET
ECCCCCEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHH
RQLGTIFNVEVTGISDDKSIVEMTVVPEIVDFDGFINYGTSLFVPMVSQEKDAKEEVVMV
HHCCEEEEEEEECCCCCCCEEEEEECCHHHCCCCHHHCCCEEEEEECCCCCCCCCCEEEE
KTSDNFILQPVFSTRRLTAPVRIATGNTLVIGALKKSTSITYEDKIPVLGDIPWVGRLFR
EECCCEEEEECCCCCEECCCEEEECCCEEEEEEECCCCCEEECCCCCCEECCHHHHHHHH
SKGSKEQRKAIIIMVKAEVVDPGGKKLYTPDTSIPDDEVPAGDASLPALSNAQ
CCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAIQQIAMALAVAGIGAGQGLAQEGAGAARRAAARMEEQAQASMLLLGQARQQYSEGKY
HHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
QEALDNYRRSLTALPKSPNMEKRRRFLETSIADASVAVAQEYIKAGRYDEAVKLLEDALK
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
STPDHALARRTLEIARDPVRTNPALSPEHVKNVEEVNRLLHLAFGYYELGQYDAALKEFT
CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVLKTDPYNTAARRGMELVNRARTAYFSAARDETRSSALADVSRQWEMPVPLTETPEEPA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
SFSRPLDNPVVNVDQKLGMIRLPRVQLDGATVQEAVDYLRSQARTHDATAMTAAERGVNI
HHCCCCCCCCCCHHHHCCEEECCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCEE
SVDPGPADSVSARDAAAKRITLNLQNVPLREALEYVARASGLILRTNAFGAELVSSSDGT
EECCCCCCCCCHHHHCCEEEEEEECCCCHHHHHHHHHHHCCEEEEECCCCHHHHCCCCCC
SYMVTKSITLPPGFFSGLSEDSGAENSDPFSSGDSGSSGMTLKRVDPQKALASMGVKFPE
EEEEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCCCC
GSFIKYNSGNSTLLFHGTPRDLSMLEELVAARTAEQPLQVVVSATFLEVNQTDLEELGFN
CCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHCCCE
WIVNLNLDPTKWFMGGAGTDKNDYNNSVLDSAANVAGAVAPAGVVGGLRSGNQVFTEDSI
EEEEECCCCCHHEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEECHHHH
DSMIERGTSARSSDATYVPGGAPSIVTLRGMWSHADITMIMRGLSQKKGTDIMQHPSVIV
HHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHCCCEEE
RPGEKATFFSGRELIYPTEYDPPEVPNSTGNNNDWGDNDNNGGGIPVMPMTPAHPSAFET
ECCCCCEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHH
RQLGTIFNVEVTGISDDKSIVEMTVVPEIVDFDGFINYGTSLFVPMVSQEKDAKEEVVMV
HHCCEEEEEEEECCCCCCCEEEEEECCHHHCCCCHHHCCCEEEEEECCCCCCCCCCEEEE
KTSDNFILQPVFSTRRLTAPVRIATGNTLVIGALKKSTSITYEDKIPVLGDIPWVGRLFR
EECCCEEEEECCCCCEECCCEEEECCCEEEEEEECCCCCEEECCCCCCEECCHHHHHHHH
SKGSKEQRKAIIIMVKAEVVDPGGKKLYTPDTSIPDDEVPAGDASLPALSNAQ
CCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA