Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736126

Identifier: 187736126

GI number: 187736126

Start: 1977310

End: 1979034

Strand: Direct

Name: 187736126

Synonym: Amuc_1637

Alternate gene names: NA

Gene position: 1977310-1979034 (Clockwise)

Preceding gene: 187736125

Following gene: 187736127

Centisome position: 74.22

GC content: 57.97

Gene sequence:

>1725_bases
ATGGAGACCCATGGAGTTGACTGGGGGAGCCGGGAAACGAACGGGTGCGGAACTTTTAATGGAGTGACGGATAAAGCCTT
ACGTGAAATAGCACGGATGGGTTTCACACACATCTGGCTGACCGGGGTATTGAGGCACGCTACGCAGACGGCCCATCCCG
GGCTGGCCGCCCAGCCGGAATCCATCGTAAAAGGCCTGGCAGGAAGTCCCTATGCCGTGGTGGATTATTTTGACGTGGAT
CCGGACCTGGCCTCCTCCCCGGAGAAGAGAATGGATGAGTTCAAGGCTCTGGTAAAGCGTTGCCGGACGGTGGGGCTGCT
GCCGATGATGGATTTTATTCCCAACCATGTTTCCCGAGCCTACCTGGCGGACTGGGACGGGCATGACGATTTTGGAGAAG
GAGATGATCCCCATACGTTTTTTTCTCCGGAGCAGGGGTACTTTTACCTGACCTCCAACAGCCTTGGGGACGGTCCACCC
CTGCGTCTGCCGGACGGCCTGTTTGAAGGGGAAATGACGTTCGGCCGTGTGACGGGCAACAATGCCGTTACATGGAATCC
CGGCAAGTACGACTGGTATGAAACGGTCAAGCTCAACTACGGCTATAACTTTATGGCCGGTCTTCCTGCCCTCCGCCTGT
TGCCGGGGTGGACCAGCCCCAAGCAGCATGTGCCCAAGACATGGCGCATCATGGACGATATCCTTTCCTTCTGGCAAAGC
CTGGGCATCGGCGGTTTCAGGTGCGACATGGCCCAAATGATCCCCATGGCTTTCTGGAAATGGGCCATTTCCCGTTCCCG
GGTGCGTCTGCCGGACGTGTTTTTCATGGCGGAGGCATACAACGACCACATGAAAACCACACCCGGCGATCCGTGCGCCG
CCCTTCTGGATGCCGGATTTAATGCCGTTTACGATTCCGACTGCTATCATCTGGCGCTCCATATGTACACGGAAAATAAC
TGGGCCAATGACTTCGACCGGCTTTTCCGAAGCAATCCCATATACATGACCCACGGCGTCCGCTACGTGGAAAACCATGA
TGAAACGCGCGTGTGCTCCCCTCTTTCCTGGGGCGGCGTGGGGCGCGTTGTTCTGCCGGCGGTCATGACGCTGGTGTATG
CCTCCGGGAGCGGTCCCGTGCTGGTGTACAACGGGCAGGAAGTGGGGGAACGGGCGGAGGGGCCCGGCGGTTTCGGCGGA
CATGACGGGCGTACCAGTATTTTTGACTATACCTGCCTCCCCCGGCTCCAGCCCTGGGTGGCGGATGGCCGGTTTGACTC
TTCCCTGTTGCCGGAAGAGTCCGCAGAACTGAGAAATTTTCATCGGAAGCTTCTTCCTCTGATGCAGCATCCGGCGCTGG
ACCGGGGAGATTTTTACGGCCTGAACTGGGCTAATATGAAAAACACCACTTTCGGCAGGGAACCGGCGGAAGACACTTCC
GGCCACTGGGTATATGCCATGCTCCGGCATGATGCCCGCGCCAGGGCCACCGTGCTTGTGGTGGGGAACCTTTCTCCAAA
TATCAATTTCTACAACCTGCGCATTTCCATTCCCCAGCACGCTTTCGGCTGGTGCGGCATCCAGACGGATCGGGTACGCG
TCAGAAACCTGATGGACGCCGAGGGTGAGGACAGGATTTTTGAGCGGCGGGAATTGATGGACTGCGGTCTGTCCCATCCC
CTGAAACCGGGACATGTGGGCGTGCTGGAACTGTCTGCCGTTTAG

Upstream 100 bases:

>100_bases
CAGAATACCTGAAAAAGTTAGCATTATAAGCGTCAAAATTTGATTATTTCAACTCATGCGTCCTGTCATTTATCAACTAT
TTGTTCGTCATTTTTCCAAT

Downstream 100 bases:

>100_bases
AGAAGCGTTCCCTCCGGAGGGAAGCTGCAGCCTTTGCCGATATTTTTTACTCTGCTGGGCGTTTTTATGATGACGGGCGG
TTTTTAATTCGGTATAGTCC

Product: alpha amylase catalytic region

Products: NA

Alternate protein names: Glycosidase; Alpha-Amylase Family Protein; Alpha-Amylase; Alpha Amylase; Glycoside Hydrolase Family Alpha-Glucosidase; Alpha Amylase Family Protein; Alpha Amylase Domain-Containing Protein; Alpha Amylase Catalytic Subunit; LOW QUALITY PROTEIN Alpha-Amylase Family Protein

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
METHGVDWGSRETNGCGTFNGVTDKALREIARMGFTHIWLTGVLRHATQTAHPGLAAQPESIVKGLAGSPYAVVDYFDVD
PDLASSPEKRMDEFKALVKRCRTVGLLPMMDFIPNHVSRAYLADWDGHDDFGEGDDPHTFFSPEQGYFYLTSNSLGDGPP
LRLPDGLFEGEMTFGRVTGNNAVTWNPGKYDWYETVKLNYGYNFMAGLPALRLLPGWTSPKQHVPKTWRIMDDILSFWQS
LGIGGFRCDMAQMIPMAFWKWAISRSRVRLPDVFFMAEAYNDHMKTTPGDPCAALLDAGFNAVYDSDCYHLALHMYTENN
WANDFDRLFRSNPIYMTHGVRYVENHDETRVCSPLSWGGVGRVVLPAVMTLVYASGSGPVLVYNGQEVGERAEGPGGFGG
HDGRTSIFDYTCLPRLQPWVADGRFDSSLLPEESAELRNFHRKLLPLMQHPALDRGDFYGLNWANMKNTTFGREPAEDTS
GHWVYAMLRHDARARATVLVVGNLSPNINFYNLRISIPQHAFGWCGIQTDRVRVRNLMDAEGEDRIFERRELMDCGLSHP
LKPGHVGVLELSAV

Sequences:

>Translated_574_residues
METHGVDWGSRETNGCGTFNGVTDKALREIARMGFTHIWLTGVLRHATQTAHPGLAAQPESIVKGLAGSPYAVVDYFDVD
PDLASSPEKRMDEFKALVKRCRTVGLLPMMDFIPNHVSRAYLADWDGHDDFGEGDDPHTFFSPEQGYFYLTSNSLGDGPP
LRLPDGLFEGEMTFGRVTGNNAVTWNPGKYDWYETVKLNYGYNFMAGLPALRLLPGWTSPKQHVPKTWRIMDDILSFWQS
LGIGGFRCDMAQMIPMAFWKWAISRSRVRLPDVFFMAEAYNDHMKTTPGDPCAALLDAGFNAVYDSDCYHLALHMYTENN
WANDFDRLFRSNPIYMTHGVRYVENHDETRVCSPLSWGGVGRVVLPAVMTLVYASGSGPVLVYNGQEVGERAEGPGGFGG
HDGRTSIFDYTCLPRLQPWVADGRFDSSLLPEESAELRNFHRKLLPLMQHPALDRGDFYGLNWANMKNTTFGREPAEDTS
GHWVYAMLRHDARARATVLVVGNLSPNINFYNLRISIPQHAFGWCGIQTDRVRVRNLMDAEGEDRIFERRELMDCGLSHP
LKPGHVGVLELSAV
>Mature_574_residues
METHGVDWGSRETNGCGTFNGVTDKALREIARMGFTHIWLTGVLRHATQTAHPGLAAQPESIVKGLAGSPYAVVDYFDVD
PDLASSPEKRMDEFKALVKRCRTVGLLPMMDFIPNHVSRAYLADWDGHDDFGEGDDPHTFFSPEQGYFYLTSNSLGDGPP
LRLPDGLFEGEMTFGRVTGNNAVTWNPGKYDWYETVKLNYGYNFMAGLPALRLLPGWTSPKQHVPKTWRIMDDILSFWQS
LGIGGFRCDMAQMIPMAFWKWAISRSRVRLPDVFFMAEAYNDHMKTTPGDPCAALLDAGFNAVYDSDCYHLALHMYTENN
WANDFDRLFRSNPIYMTHGVRYVENHDETRVCSPLSWGGVGRVVLPAVMTLVYASGSGPVLVYNGQEVGERAEGPGGFGG
HDGRTSIFDYTCLPRLQPWVADGRFDSSLLPEESAELRNFHRKLLPLMQHPALDRGDFYGLNWANMKNTTFGREPAEDTS
GHWVYAMLRHDARARATVLVVGNLSPNINFYNLRISIPQHAFGWCGIQTDRVRVRNLMDAEGEDRIFERRELMDCGLSHP
LKPGHVGVLELSAV

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64478; Mature: 64478

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METHGVDWGSRETNGCGTFNGVTDKALREIARMGFTHIWLTGVLRHATQTAHPGLAAQPE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHH
SIVKGLAGSPYAVVDYFDVDPDLASSPEKRMDEFKALVKRCRTVGLLPMMDFIPNHVSRA
HHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
YLADWDGHDDFGEGDDPHTFFSPEQGYFYLTSNSLGDGPPLRLPDGLFEGEMTFGRVTGN
EEECCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECC
NAVTWNPGKYDWYETVKLNYGYNFMAGLPALRLLPGWTSPKQHVPKTWRIMDDILSFWQS
CEEEECCCCCCCEEEEEEECCCCHHHHCCHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHH
LGIGGFRCDMAQMIPMAFWKWAISRSRVRLPDVFFMAEAYNDHMKTTPGDPCAALLDAGF
HCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCCCCCCCCCCHHHHHHHCCC
NAVYDSDCYHLALHMYTENNWANDFDRLFRSNPIYMTHGVRYVENHDETRVCSPLSWGGV
CEEECCCCEEEEEEEEECCCCCHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCCC
GRVVLPAVMTLVYASGSGPVLVYNGQEVGERAEGPGGFGGHDGRTSIFDYTCLPRLQPWV
CHHHHHHHHHHHEECCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHH
ADGRFDSSLLPEESAELRNFHRKLLPLMQHPALDRGDFYGLNWANMKNTTFGREPAEDTS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GHWVYAMLRHDARARATVLVVGNLSPNINFYNLRISIPQHAFGWCGIQTDRVRVRNLMDA
CCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCEECCCCHHHHHHHHHHCC
EGEDRIFERRELMDCGLSHPLKPGHVGVLELSAV
CCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
METHGVDWGSRETNGCGTFNGVTDKALREIARMGFTHIWLTGVLRHATQTAHPGLAAQPE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHH
SIVKGLAGSPYAVVDYFDVDPDLASSPEKRMDEFKALVKRCRTVGLLPMMDFIPNHVSRA
HHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
YLADWDGHDDFGEGDDPHTFFSPEQGYFYLTSNSLGDGPPLRLPDGLFEGEMTFGRVTGN
EEECCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECC
NAVTWNPGKYDWYETVKLNYGYNFMAGLPALRLLPGWTSPKQHVPKTWRIMDDILSFWQS
CEEEECCCCCCCEEEEEEECCCCHHHHCCHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHH
LGIGGFRCDMAQMIPMAFWKWAISRSRVRLPDVFFMAEAYNDHMKTTPGDPCAALLDAGF
HCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCCCCCCCCCCHHHHHHHCCC
NAVYDSDCYHLALHMYTENNWANDFDRLFRSNPIYMTHGVRYVENHDETRVCSPLSWGGV
CEEECCCCEEEEEEEEECCCCCHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCCCCCCC
GRVVLPAVMTLVYASGSGPVLVYNGQEVGERAEGPGGFGGHDGRTSIFDYTCLPRLQPWV
CHHHHHHHHHHHEECCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHH
ADGRFDSSLLPEESAELRNFHRKLLPLMQHPALDRGDFYGLNWANMKNTTFGREPAEDTS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GHWVYAMLRHDARARATVLVVGNLSPNINFYNLRISIPQHAFGWCGIQTDRVRVRNLMDA
CCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCEECCCCHHHHHHHHHHCC
EGEDRIFERRELMDCGLSHPLKPGHVGVLELSAV
CCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA