Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is malQ [H]
Identifier: 187736110
GI number: 187736110
Start: 1951396
End: 1953267
Strand: Reverse
Name: malQ [H]
Synonym: Amuc_1621
Alternate gene names: 187736110
Gene position: 1953267-1951396 (Counterclockwise)
Preceding gene: 187736112
Following gene: 187736108
Centisome position: 73.32
GC content: 57.75
Gene sequence:
>1872_bases ATGCGTTCTGATATGGATGAGAAAAGATTAGCCGGCGTAGTTCTGCCATTGTTCTCCCTGCGCCGTAACAATGACCACGG AATCGGGGACCTGACGGCCTTGCGCCAATGGATTGACTGGGCGGCGGATGCCCATGTGGGGTTCCTCCAGCTGCTCCCCG TCAATGCCCTGGGCAGGGACGAATGCCCCTCTCCCTATTCCGCCATCAGCTCCGTAGCTTTGGAACCCCTGTACCTTTCC CTGGAACCCTGGACCATACCCGGCCTGGAAGAACGCGTATTCAATGAAACGGGGGACACGCTGCCGTGGGAACAGCCCTC CGGCCCGGATCTGGTGGACTACCCCAAGGTCAGATTCTGGAAAATGTGGATTCTGCGGGGAGCCTGGAACAATTTCAAAA CCAAGCCGGAATATGAGTGCATTATGCCCAAATTCAGGGAATGGGTGAAAGAACAGGGGAGCTGGCTGGAAGACTTTGTC TGTTTCCAGATTCTCTGCGACCTGTTCGGCACGGAAATCTGGTGGCACTGGCCGGAACAGGATCCGGCGCGGGCCAAGGC CATTGCCGCCGATTACGAGGAAGAAAAGGATTTTGCCCGCTGGCTCCAGTGGCTCTGTGAAAAACAGTGGGAATTCATCC GTATTTATGCGGACGAACGCAATGTGAAGCTGATGGGGGATATCCCCATTGGCGTTTCCCTTTCCAGCGCCGACGTCTTT TTTGAACGCCACCTGTTTGACACGGAATGGTGCGGAGGAGCCCCGGCGGAAGGCAGCTATGCGGAAGACCCATTCACGGC CAAATGGGGGCAAAACTGGGGCATTCCGCTGTATAGATGGGATGTCATGGCGCAGGACAACTTCGCCTGGTGGCGCCGCC GGGTAAAATACTGCACCAAGATTTTCAGCATGTACAGGATCGACCACATCCTGGGCTTTTACCGCATTTACTCCTTCCCG TGGAAACCCACGGAAAACGGGGTCTTCCTGCCGCTTTCCCCCGATCAGGCTGCCCAGAGAACGGGCGGAAGGCTGCCCGG CTTCAAGCCGCGCGGGGATGACAATGCAGCGGACCGCAACATGAACCTGGCGGACGGGGACCTGTACCTGCGCCTTCTGC TTTCCGCCGCCCCCGGCGTCAGCGTGGTGGGGGAAGACCTGGGCTGCGTTCCGGACTACGTGCGCCCGAACATGCGGCAG CTGGATATCCCCGGTTTCAAAATTCCCCACTGGGAAATCAAGGCGGACGGAACCATTACGTCTGGAAAAGAATATCACGA ATGCTCCTTTGCGGCGTTCGGAACGCATGATTTCGAAACCATCATGCAGACATGGAACGACAGCTACGCGAAAATCGAAC GCGCCCGCAAGCTGGGCCTGTGGGAGAACGGCTCCCCAAAAACGCCGTCCAGCCCGGAACAGGAAAACATCGTGCGCCAG GCGGAGGACGGAGCGCGCCTTCTGAAATGGTTTGCGGATTTCTCCGGCATGCAGCCTGAAACCTGTCTTTCCTACTGGAA CCAGGAAATCAAGACGGCCATGTACAACGCTCTGTTCCGTTCCCGTTCCCGTTATGCGGCCATTCTCTGGCCTGCTCTCT TCGGCATCAACAAACGGCTCAATATTCCCGGCACTACGGGAGGGACCAACTGGAGGGAACGCATGCCCTTCAAGGCCGTG GAAGCATGCGGCATGCCACAGACCGCATGGCTGCGCACCATCATCGACGAATCTGGCCGCACGCCGCTGCAGGGTGAAGA CGCCATCAGGGCGCTCAAGGAATCCAGCAAACGCCTCTTCCCGAAGATCACCGTCAACAACGAACGCTTCCTGAAACGGA TGCTGATGTGGCCGAACGGCAAAACATTGTAG
Upstream 100 bases:
>100_bases GACAACGTATTAAGCTTGCCGCCTTCCTGCCGGAAATGCTATTCTGGCGCTTACTGTTCCAACGGCTGACGCAGGTCCAT CCGGGGGAACCGCTCAAGTA
Downstream 100 bases:
>100_bases CTGTCCCCCCCTGCCGGAACATCCCCCCCGCAGTATCAAAAAAGGGCGCGTTTCCTTCGAAAACGTGCCCTTTTTTCTAT CCGTGCTGACGTTTCCTAAA
Product: 4-alpha-glucanotransferase
Products: NA
Alternate protein names: Amylomaltase; Disproportionating enzyme; D-enzyme [H]
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MRSDMDEKRLAGVVLPLFSLRRNNDHGIGDLTALRQWIDWAADAHVGFLQLLPVNALGRDECPSPYSAISSVALEPLYLS LEPWTIPGLEERVFNETGDTLPWEQPSGPDLVDYPKVRFWKMWILRGAWNNFKTKPEYECIMPKFREWVKEQGSWLEDFV CFQILCDLFGTEIWWHWPEQDPARAKAIAADYEEEKDFARWLQWLCEKQWEFIRIYADERNVKLMGDIPIGVSLSSADVF FERHLFDTEWCGGAPAEGSYAEDPFTAKWGQNWGIPLYRWDVMAQDNFAWWRRRVKYCTKIFSMYRIDHILGFYRIYSFP WKPTENGVFLPLSPDQAAQRTGGRLPGFKPRGDDNAADRNMNLADGDLYLRLLLSAAPGVSVVGEDLGCVPDYVRPNMRQ LDIPGFKIPHWEIKADGTITSGKEYHECSFAAFGTHDFETIMQTWNDSYAKIERARKLGLWENGSPKTPSSPEQENIVRQ AEDGARLLKWFADFSGMQPETCLSYWNQEIKTAMYNALFRSRSRYAAILWPALFGINKRLNIPGTTGGTNWRERMPFKAV EACGMPQTAWLRTIIDESGRTPLQGEDAIRALKESSKRLFPKITVNNERFLKRMLMWPNGKTL
Sequences:
>Translated_623_residues MRSDMDEKRLAGVVLPLFSLRRNNDHGIGDLTALRQWIDWAADAHVGFLQLLPVNALGRDECPSPYSAISSVALEPLYLS LEPWTIPGLEERVFNETGDTLPWEQPSGPDLVDYPKVRFWKMWILRGAWNNFKTKPEYECIMPKFREWVKEQGSWLEDFV CFQILCDLFGTEIWWHWPEQDPARAKAIAADYEEEKDFARWLQWLCEKQWEFIRIYADERNVKLMGDIPIGVSLSSADVF FERHLFDTEWCGGAPAEGSYAEDPFTAKWGQNWGIPLYRWDVMAQDNFAWWRRRVKYCTKIFSMYRIDHILGFYRIYSFP WKPTENGVFLPLSPDQAAQRTGGRLPGFKPRGDDNAADRNMNLADGDLYLRLLLSAAPGVSVVGEDLGCVPDYVRPNMRQ LDIPGFKIPHWEIKADGTITSGKEYHECSFAAFGTHDFETIMQTWNDSYAKIERARKLGLWENGSPKTPSSPEQENIVRQ AEDGARLLKWFADFSGMQPETCLSYWNQEIKTAMYNALFRSRSRYAAILWPALFGINKRLNIPGTTGGTNWRERMPFKAV EACGMPQTAWLRTIIDESGRTPLQGEDAIRALKESSKRLFPKITVNNERFLKRMLMWPNGKTL >Mature_623_residues MRSDMDEKRLAGVVLPLFSLRRNNDHGIGDLTALRQWIDWAADAHVGFLQLLPVNALGRDECPSPYSAISSVALEPLYLS LEPWTIPGLEERVFNETGDTLPWEQPSGPDLVDYPKVRFWKMWILRGAWNNFKTKPEYECIMPKFREWVKEQGSWLEDFV CFQILCDLFGTEIWWHWPEQDPARAKAIAADYEEEKDFARWLQWLCEKQWEFIRIYADERNVKLMGDIPIGVSLSSADVF FERHLFDTEWCGGAPAEGSYAEDPFTAKWGQNWGIPLYRWDVMAQDNFAWWRRRVKYCTKIFSMYRIDHILGFYRIYSFP WKPTENGVFLPLSPDQAAQRTGGRLPGFKPRGDDNAADRNMNLADGDLYLRLLLSAAPGVSVVGEDLGCVPDYVRPNMRQ LDIPGFKIPHWEIKADGTITSGKEYHECSFAAFGTHDFETIMQTWNDSYAKIERARKLGLWENGSPKTPSSPEQENIVRQ AEDGARLLKWFADFSGMQPETCLSYWNQEIKTAMYNALFRSRSRYAAILWPALFGINKRLNIPGTTGGTNWRERMPFKAV EACGMPQTAWLRTIIDESGRTPLQGEDAIRALKESSKRLFPKITVNNERFLKRMLMWPNGKTL
Specific function: Unknown
COG id: COG1640
COG function: function code G; 4-alpha-glucanotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the disproportionating enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1789821, Length=583, Percent_Identity=24.8713550600343, Blast_Score=128, Evalue=9e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003385 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02446 Glyco_hydro_77 [H]
EC number: =2.4.1.25 [H]
Molecular weight: Translated: 72033; Mature: 72033
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSDMDEKRLAGVVLPLFSLRRNNDHGIGDLTALRQWIDWAADAHVGFLQLLPVNALGRD CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC ECPSPYSAISSVALEPLYLSLEPWTIPGLEERVFNETGDTLPWEQPSGPDLVDYPKVRFW CCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH KMWILRGAWNNFKTKPEYECIMPKFREWVKEQGSWLEDFVCFQILCDLFGTEIWWHWPEQ HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEECCCC DPARAKAIAADYEEEKDFARWLQWLCEKQWEFIRIYADERNVKLMGDIPIGVSLSSADVF CCHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCEEECHHHHH FERHLFDTEWCGGAPAEGSYAEDPFTAKWGQNWGIPLYRWDVMAQDNFAWWRRRVKYCTK HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH IFSMYRIDHILGFYRIYSFPWKPTENGVFLPLSPDQAAQRTGGRLPGFKPRGDDNAADRN HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCC MNLADGDLYLRLLLSAAPGVSVVGEDLGCVPDYVRPNMRQLDIPGFKIPHWEIKADGTIT CCCCCHHHHHHHHHHCCCCCEECCCCCCCCCHHHCCCCEEECCCCCCCCCEEEEECCEEC SGKEYHECSFAAFGTHDFETIMQTWNDSYAKIERARKLGLWENGSPKTPSSPEQENIVRQ CCCCHHCCCEEECCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH AEDGARLLKWFADFSGMQPETCLSYWNQEIKTAMYNALFRSRSRYAAILWPALFGINKRL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEE NIPGTTGGTNWRERMPFKAVEACGMPQTAWLRTIIDESGRTPLQGEDAIRALKESSKRLF CCCCCCCCCCHHHHCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC PKITVNNERFLKRMLMWPNGKTL CEEEECHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRSDMDEKRLAGVVLPLFSLRRNNDHGIGDLTALRQWIDWAADAHVGFLQLLPVNALGRD CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC ECPSPYSAISSVALEPLYLSLEPWTIPGLEERVFNETGDTLPWEQPSGPDLVDYPKVRFW CCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH KMWILRGAWNNFKTKPEYECIMPKFREWVKEQGSWLEDFVCFQILCDLFGTEIWWHWPEQ HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEECCCC DPARAKAIAADYEEEKDFARWLQWLCEKQWEFIRIYADERNVKLMGDIPIGVSLSSADVF CCHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCEEECHHHHH FERHLFDTEWCGGAPAEGSYAEDPFTAKWGQNWGIPLYRWDVMAQDNFAWWRRRVKYCTK HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH IFSMYRIDHILGFYRIYSFPWKPTENGVFLPLSPDQAAQRTGGRLPGFKPRGDDNAADRN HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCC MNLADGDLYLRLLLSAAPGVSVVGEDLGCVPDYVRPNMRQLDIPGFKIPHWEIKADGTIT CCCCCHHHHHHHHHHCCCCCEECCCCCCCCCHHHCCCCEEECCCCCCCCCEEEEECCEEC SGKEYHECSFAAFGTHDFETIMQTWNDSYAKIERARKLGLWENGSPKTPSSPEQENIVRQ CCCCHHCCCEEECCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH AEDGARLLKWFADFSGMQPETCLSYWNQEIKTAMYNALFRSRSRYAAILWPALFGINKRL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEE NIPGTTGGTNWRERMPFKAVEACGMPQTAWLRTIIDESGRTPLQGEDAIRALKESSKRLF CCCCCCCCCCHHHHCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC PKITVNNERFLKRMLMWPNGKTL CEEEECHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]