Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is prmA [H]
Identifier: 187736108
GI number: 187736108
Start: 1946896
End: 1947756
Strand: Reverse
Name: prmA [H]
Synonym: Amuc_1619
Alternate gene names: 187736108
Gene position: 1947756-1946896 (Counterclockwise)
Preceding gene: 187736110
Following gene: 187736105
Centisome position: 73.11
GC content: 54.94
Gene sequence:
>861_bases ATGACATGGAGTTGGAACAAACTTTCCGCCGCCAAATGGGAAGATGCCTGGAGCGAACGCATCGCCGGAAATCCGAACGC CGTTATTACAAAAATCAAGGGGGGGAAAACGGTTCGAATCACCGTTTACTGCGATGATGAAGAAGACGCCCTGGCCTTGA AAAAATATTTTGGAGGAACTGTCAGGGAAATCAAGACGCAGGACTGGGTAGCGACCCAGAAGCGGGAAAAACGCCCTCCG CTCAAAATAAGGGACGCACTGGTCATTACGGAGCAGAGTTCTCCGGAGAATCTGGCCGCTCTGCAGAAACAGTTCCCCTC GCGCTGCATCCTGAGCGTTCCCGCCGAAATGGCTTTCGGAACAGGAGACCACGCTACCACATCCACCTGCCTGCGTTTTA TCTGCGACGCTGCCAAATCCCGCAGAAAAACATCATGGAGCATGACGGACATAGGCTGCGGAACCGCCGTGCTGGCCATG GCGGCGCTGAAGCTGGGGGCGGAGCACGCCACGGCTTTCGATTTTGACCCCATGGCCATTGAAGTGGCCCGGCACAACAT GGTCCGCAACGCCGTTACGGCGGAACAGCTGGACTTATTTGTGGAAGACGTCTTCAAATGGAAACCTTCGGAGTCCCAGC AGGGTGACCTTGTCGTCGCCAACCTGTTTTCAACCATACTGCAAAAGGCTTTTCCACAAATCATCGCCGCCATGAAGAAG GATGCCGCTTTGGTCATCTCCGGCATTCTGGCTTCCCAGTGGGAAGAAACGAAAACGGCAGCGGAACGTCACGGTCTGTT CTTTGAACGGGTCGTCAAACGCGGGAAATGGATTACGGCAAAGGGAGGAATGGCCCGGTAG
Upstream 100 bases:
>100_bases AATTTTCAACAATAGAGCCACACAATCCCAAAAACTGCGAGAATGCAGTTACAATCAATCCATTCTTGCCTCCCTGACGG AAAAATCCCATACTTTCTGC
Downstream 100 bases:
>100_bases CAAATAGATCCGCTCCGCATTTTTGTTCCGCCCTCACGGCCCTTCCTTCATCGGAACAGCAATACCCGGCTTCCAGTTCA AAAATCTCCGCATCCCGGCA
Product: ribosomal L11 methyltransferase
Products: NA
Alternate protein names: L11 Mtase [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTWSWNKLSAAKWEDAWSERIAGNPNAVITKIKGGKTVRITVYCDDEEDALALKKYFGGTVREIKTQDWVATQKREKRPP LKIRDALVITEQSSPENLAALQKQFPSRCILSVPAEMAFGTGDHATTSTCLRFICDAAKSRRKTSWSMTDIGCGTAVLAM AALKLGAEHATAFDFDPMAIEVARHNMVRNAVTAEQLDLFVEDVFKWKPSESQQGDLVVANLFSTILQKAFPQIIAAMKK DAALVISGILASQWEETKTAAERHGLFFERVVKRGKWITAKGGMAR
Sequences:
>Translated_286_residues MTWSWNKLSAAKWEDAWSERIAGNPNAVITKIKGGKTVRITVYCDDEEDALALKKYFGGTVREIKTQDWVATQKREKRPP LKIRDALVITEQSSPENLAALQKQFPSRCILSVPAEMAFGTGDHATTSTCLRFICDAAKSRRKTSWSMTDIGCGTAVLAM AALKLGAEHATAFDFDPMAIEVARHNMVRNAVTAEQLDLFVEDVFKWKPSESQQGDLVVANLFSTILQKAFPQIIAAMKK DAALVISGILASQWEETKTAAERHGLFFERVVKRGKWITAKGGMAR >Mature_285_residues TWSWNKLSAAKWEDAWSERIAGNPNAVITKIKGGKTVRITVYCDDEEDALALKKYFGGTVREIKTQDWVATQKREKRPPL KIRDALVITEQSSPENLAALQKQFPSRCILSVPAEMAFGTGDHATTSTCLRFICDAAKSRRKTSWSMTDIGCGTAVLAMA ALKLGAEHATAFDFDPMAIEVARHNMVRNAVTAEQLDLFVEDVFKWKPSESQQGDLVVANLFSTILQKAFPQIIAAMKKD AALVISGILASQWEETKTAAERHGLFFERVVKRGKWITAKGGMAR
Specific function: Methylates ribosomal protein L11 [H]
COG id: COG2264
COG function: function code J; Ribosomal protein L11 methylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. PrmA family [H]
Homologues:
Organism=Escherichia coli, GI2367208, Length=166, Percent_Identity=38.5542168674699, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010456 - InterPro: IPR004498 [H]
Pfam domain/function: PF06325 PrmA [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 31710; Mature: 31579
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWSWNKLSAAKWEDAWSERIAGNPNAVITKIKGGKTVRITVYCDDEEDALALKKYFGGT CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHHHCCH VREIKTQDWVATQKREKRPPLKIRDALVITEQSSPENLAALQKQFPSRCILSVPAEMAFG HHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCEEHHCCHHHHCC TGDHATTSTCLRFICDAAKSRRKTSWSMTDIGCGTAVLAMAALKLGAEHATAFDFDPMAI CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHH EVARHNMVRNAVTAEQLDLFVEDVFKWKPSESQQGDLVVANLFSTILQKAFPQIIAAMKK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC DAALVISGILASQWEETKTAAERHGLFFERVVKRGKWITAKGGMAR CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEECCCCCCC >Mature Secondary Structure TWSWNKLSAAKWEDAWSERIAGNPNAVITKIKGGKTVRITVYCDDEEDALALKKYFGGT CCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHHHCCH VREIKTQDWVATQKREKRPPLKIRDALVITEQSSPENLAALQKQFPSRCILSVPAEMAFG HHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCEEHHCCHHHHCC TGDHATTSTCLRFICDAAKSRRKTSWSMTDIGCGTAVLAMAALKLGAEHATAFDFDPMAI CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHH EVARHNMVRNAVTAEQLDLFVEDVFKWKPSESQQGDLVVANLFSTILQKAFPQIIAAMKK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC DAALVISGILASQWEETKTAAERHGLFFERVVKRGKWITAKGGMAR CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]
General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA