Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is nuoK
Identifier: 187736096
GI number: 187736096
Start: 1932931
End: 1933248
Strand: Reverse
Name: nuoK
Synonym: Amuc_1607
Alternate gene names: 187736096
Gene position: 1933248-1932931 (Counterclockwise)
Preceding gene: 187736097
Following gene: 187736095
Centisome position: 72.57
GC content: 58.18
Gene sequence:
>318_bases ATGATACCTCTTACGCATTATCTGATCCTCTCCGGCGTCCTGTTCGCCATCGGCCTGATGGGGGTGATTGTCCGGCGCGA CATCATCGTCATCTTCATGTGCCTGGAAATGATGCTCAGTGCTGCCAACCTGTCCCTGGTAGCGTTTTCCCGCGCCCAGG GCACTATGGGCCTGCCCAACTATGACGGCCAGGCCCTCTCCATCTTTATCCTGACCATCGCCGCAGCGGAAGTGGCTATC GGCCTAGCCCTCATCGTCTCCCTGTACAGGGCCAGGCGCACGGCCAGCACGCAAGATCTCAACACGCTGAAAGATTAA
Upstream 100 bases:
>100_bases GTCATCGCCGGTCTGGCCCTGCTGGTGGCTTCCATCGGCGTCGTCGTGCTGAGCCGCCGCCCTTCCGGAAAATAAAGAAC CCCTTACCACAGCCATCACC
Downstream 100 bases:
>100_bases GAGCAACACACTACTCCACGAACATGTTCAATATTGATATTCAATACACCTGGCTTCTGCTCTTCCTGCCGCTGGTCGTA GCCGCCTTTGACTGGTTCCT
Product: NADH-ubiquinone oxidoreductase chain 4L
Products: NA
Alternate protein names: NADH dehydrogenase I subunit K; NDH-1 subunit K
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MIPLTHYLILSGVLFAIGLMGVIVRRDIIVIFMCLEMMLSAANLSLVAFSRAQGTMGLPNYDGQALSIFILTIAAAEVAI GLALIVSLYRARRTASTQDLNTLKD
Sequences:
>Translated_105_residues MIPLTHYLILSGVLFAIGLMGVIVRRDIIVIFMCLEMMLSAANLSLVAFSRAQGTMGLPNYDGQALSIFILTIAAAEVAI GLALIVSLYRARRTASTQDLNTLKD >Mature_105_residues MIPLTHYLILSGVLFAIGLMGVIVRRDIIVIFMCLEMMLSAANLSLVAFSRAQGTMGLPNYDGQALSIFILTIAAAEVAI GLALIVSLYRARRTASTQDLNTLKD
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG0713
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 4L family
Homologues:
Organism=Escherichia coli, GI1788615, Length=104, Percent_Identity=36.5384615384615, Blast_Score=74, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NUOK_AKKM8 (B2ULY3)
Other databases:
- EMBL: CP001071 - RefSeq: YP_001878208.1 - GeneID: 6275822 - GenomeReviews: CP001071_GR - KEGG: amu:Amuc_1607 - HOGENOM: HBG673066 - OMA: RNAIVIF - ProtClustDB: CLSK2337911 - GO: GO:0006810 - HAMAP: MF_01456 - InterPro: IPR001133
Pfam domain/function: PF00420 Oxidored_q2
EC number: =1.6.99.5
Molecular weight: Translated: 11344; Mature: 11344
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1d6e0778)-; HASH(0x1df51aa4)-; HASH(0x1e0a63b8)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPLTHYLILSGVLFAIGLMGVIVRRDIIVIFMCLEMMLSAANLSLVAFSRAQGTMGLPN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCC YDGQALSIFILTIAAAEVAIGLALIVSLYRARRTASTQDLNTLKD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCH >Mature Secondary Structure MIPLTHYLILSGVLFAIGLMGVIVRRDIIVIFMCLEMMLSAANLSLVAFSRAQGTMGLPN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCC YDGQALSIFILTIAAAEVAIGLALIVSLYRARRTASTQDLNTLKD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA