Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736090
Identifier: 187736090
GI number: 187736090
Start: 1926091
End: 1926564
Strand: Direct
Name: 187736090
Synonym: Amuc_1601
Alternate gene names: NA
Gene position: 1926091-1926564 (Clockwise)
Preceding gene: 187736089
Following gene: 187736104
Centisome position: 72.3
GC content: 57.38
Gene sequence:
>474_bases ATGCCGGTGACGTTGAAATTGTCCGACGAGGAAGCGCGTGATTTGGCGGAAATGCTTTCCACTGCCGCCACGGTGGCTGC CTCCAACCAGCAGGATGGGGCGGAGGCTCGTCTGGCGGCGTGGGGGAATTTGGTTTCCCGGCTGATGAAGGAGCTTTCCG TTACCTCCAAATTGAAAGGGCGCATTGCCTATGCGGATGAGCTGGGCGGCTATGCCTTCACCCGGGAATATGAAGAAAGC GCCTTTTTCCAGGATTGCCTGGATGAATACCGGGACAACTCTTTCTGGGCGGATCTCGTGACACGTATGGCGGACAAGGC CATCAGCGAACACCTGGGCCCGGAATATTTTGAAAACATGCCGGAGGAGGAACGCCGCCGTACTGCGGAAGCCCTGGAAA AATCCCTGTGGCAGGAATGCGCCAGATACGGCATTGACCGGCTGGGCTTCATCTTGCCTCCGTCAGACGGATAA
Upstream 100 bases:
>100_bases GGTGGAGGCTGCGGATGTGGAAATGGTGTGGGACCCCCCCTGGAACCAGGACATGGTCAGCGAGGAGGGCAGAATGAAAC TCGGATTGATTTGATTTCCC
Downstream 100 bases:
>100_bases GGAGAAGAATCGTTTAGAAATCCTGTGGACCGGTGCGGCCCGAATGATTCGGGCGCGGTTTGCGTGCATATCCCCGGAGA ATACCGGTCCATGTTGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MPVTLKLSDEEARDLAEMLSTAATVAASNQQDGAEARLAAWGNLVSRLMKELSVTSKLKGRIAYADELGGYAFTREYEES AFFQDCLDEYRDNSFWADLVTRMADKAISEHLGPEYFENMPEEERRRTAEALEKSLWQECARYGIDRLGFILPPSDG
Sequences:
>Translated_157_residues MPVTLKLSDEEARDLAEMLSTAATVAASNQQDGAEARLAAWGNLVSRLMKELSVTSKLKGRIAYADELGGYAFTREYEES AFFQDCLDEYRDNSFWADLVTRMADKAISEHLGPEYFENMPEEERRRTAEALEKSLWQECARYGIDRLGFILPPSDG >Mature_156_residues PVTLKLSDEEARDLAEMLSTAATVAASNQQDGAEARLAAWGNLVSRLMKELSVTSKLKGRIAYADELGGYAFTREYEESA FFQDCLDEYRDNSFWADLVTRMADKAISEHLGPEYFENMPEEERRRTAEALEKSLWQECARYGIDRLGFILPPSDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17728; Mature: 17597
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTLKLSDEEARDLAEMLSTAATVAASNQQDGAEARLAAWGNLVSRLMKELSVTSKLKG CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RIAYADELGGYAFTREYEESAFFQDCLDEYRDNSFWADLVTRMADKAISEHLGPEYFENM HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHCC PEEERRRTAEALEKSLWQECARYGIDRLGFILPPSDG CHHHHHHHHHHHHHHHHHHHHHHCHHHCCEECCCCCC >Mature Secondary Structure PVTLKLSDEEARDLAEMLSTAATVAASNQQDGAEARLAAWGNLVSRLMKELSVTSKLKG CEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RIAYADELGGYAFTREYEESAFFQDCLDEYRDNSFWADLVTRMADKAISEHLGPEYFENM HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHCC PEEERRRTAEALEKSLWQECARYGIDRLGFILPPSDG CHHHHHHHHHHHHHHHHHHHHHHCHHHCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA