Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is yitW [H]

Identifier: 187736089

GI number: 187736089

Start: 1925539

End: 1926084

Strand: Direct

Name: yitW [H]

Synonym: Amuc_1600

Alternate gene names: 187736089

Gene position: 1925539-1926084 (Clockwise)

Preceding gene: 187736086

Following gene: 187736090

Centisome position: 72.28

GC content: 58.24

Gene sequence:

>546_bases
ATGCTGAACCAGGTAGTAGAACTCAAAAGAGAAGTGACGGCGGTCCAGATCCCCAGCGGGGATGTGCTCACCCTGCCGGA
AGGGGAACGCGTGTATATCACCCAGATATTGGGCGGCTCCTATACCGTGGCTACGGACCACGGCCTGGCCCGTATCTCCA
GGGAGAACGCGGACGCTCTTGGCGCTGGAGCGGAGGAACCTTCTCCGGAAGCGGCTGCGCTGGATGAGAACGCCACACTG
GAAGAAAGGGTCTGGGATACGCTGAAATGTGTGTATGACCCGGAAATCCCCGTGGATATCGTCAACTTGGGCCTGATCTA
CGATGTGGCCGTCATTGAGTTGGAGAACGGCCTTCATCATGTGGCGGTAAAAATGACTCTCACGGCGCCCGGCTGCGGAA
TGGGGCCCCATCTGGTCATGGAAGCCAAGGACCGCATTGAAGCGTTGGAAGGGGTGGAGGCTGCGGATGTGGAAATGGTG
TGGGACCCCCCCTGGAACCAGGACATGGTCAGCGAGGAGGGCAGAATGAAACTCGGATTGATTTGA

Upstream 100 bases:

>100_bases
CGCGGAAGGTTCCGGAAACCATGGGTCGGTTCTGTTCCATGGCATTCGGAAGCCTCCGGTGCATGTCCTTAGCCGGATAT
TCCTTTAATTGCAAGGATTT

Downstream 100 bases:

>100_bases
TTTCCCATGCCGGTGACGTTGAAATTGTCCGACGAGGAAGCGCGTGATTTGGCGGAAATGCTTTCCACTGCCGCCACGGT
GGCTGCCTCCAACCAGCAGG

Product: FeS assembly SUF system protein SufT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MLNQVVELKREVTAVQIPSGDVLTLPEGERVYITQILGGSYTVATDHGLARISRENADALGAGAEEPSPEAAALDENATL
EERVWDTLKCVYDPEIPVDIVNLGLIYDVAVIELENGLHHVAVKMTLTAPGCGMGPHLVMEAKDRIEALEGVEAADVEMV
WDPPWNQDMVSEEGRMKLGLI

Sequences:

>Translated_181_residues
MLNQVVELKREVTAVQIPSGDVLTLPEGERVYITQILGGSYTVATDHGLARISRENADALGAGAEEPSPEAAALDENATL
EERVWDTLKCVYDPEIPVDIVNLGLIYDVAVIELENGLHHVAVKMTLTAPGCGMGPHLVMEAKDRIEALEGVEAADVEMV
WDPPWNQDMVSEEGRMKLGLI
>Mature_181_residues
MLNQVVELKREVTAVQIPSGDVLTLPEGERVYITQILGGSYTVATDHGLARISRENADALGAGAEEPSPEAAALDENATL
EERVWDTLKCVYDPEIPVDIVNLGLIYDVAVIELENGLHHVAVKMTLTAPGCGMGPHLVMEAKDRIEALEGVEAADVEMV
WDPPWNQDMVSEEGRMKLGLI

Specific function: Unknown

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MIP18 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002744 [H]

Pfam domain/function: PF01883 DUF59 [H]

EC number: NA

Molecular weight: Translated: 19643; Mature: 19643

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNQVVELKREVTAVQIPSGDVLTLPEGERVYITQILGGSYTVATDHGLARISRENADAL
CCHHHHHHHHHHEEEECCCCCEEECCCCCEEEEEEECCCEEEEEECCCCEECCCCCCCCC
GAGAEEPSPEAAALDENATLEERVWDTLKCVYDPEIPVDIVNLGLIYDVAVIELENGLHH
CCCCCCCCCCCEECCCCCCHHHHHHHHHHEEECCCCCEEHEEHHHEEEEEEEEECCCCEE
VAVKMTLTAPGCGMGPHLVMEAKDRIEALEGVEAADVEMVWDPPWNQDMVSEEGRMKLGL
EEEEEEEECCCCCCCCEEEEEHHHHHHHHCCCCCCCEEEEECCCCCHHHHCCCCCEEECC
I
C
>Mature Secondary Structure
MLNQVVELKREVTAVQIPSGDVLTLPEGERVYITQILGGSYTVATDHGLARISRENADAL
CCHHHHHHHHHHEEEECCCCCEEECCCCCEEEEEEECCCEEEEEECCCCEECCCCCCCCC
GAGAEEPSPEAAALDENATLEERVWDTLKCVYDPEIPVDIVNLGLIYDVAVIELENGLHH
CCCCCCCCCCCEECCCCCCHHHHHHHHHHEEECCCCCEEHEEHHHEEEEEEEEECCCCEE
VAVKMTLTAPGCGMGPHLVMEAKDRIEALEGVEAADVEMVWDPPWNQDMVSEEGRMKLGL
EEEEEEEECCCCCCCCEEEEEHHHHHHHHCCCCCCCEEEEECCCCCHHHHCCCCCEEECC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]