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The map label for this gene is yibD [C]

Identifier: 187736070

GI number: 187736070

Start: 1901803

End: 1902624

Strand: Reverse

Name: yibD [C]

Synonym: Amuc_1581

Alternate gene names: 187736070

Gene position: 1902624-1901803 (Counterclockwise)

Preceding gene: 187736071

Following gene: 187736067

Centisome position: 71.42

GC content: 55.72

Gene sequence:

>822_bases
ATGGACACAGAACCGGATTTCAGCATTATTACGCCCAGCTATAATTACGCCCGCTACGTAAGGGAATGCATAGAGAGCGT
CAAAAACCAGGAAGGGGCTACATTTGAACACATTATCCAGGACGCAGGGTCCACGGACGGCACCCTGGATATCCTGCACT
CCTACCCTCACCTGAAACTGCATGTGGAAAAGGATTCCGGCATGTCGGAAGGCATCAACCGCGGCTTCCGCAAGGCGCGC
GGGAAATGGGTTATGTGGCTGAATACGGATGACCGGTTGCTGCCGGGGGCTCTGGCGGCGGTCAAGGCTTTTGCGGATTC
CCGCCCGGATGCGGACATTGTGTATGGAGCATGGAATTTCATCGGGCCGGACGGAGAAATCCAACGCGCCATGAAGGCCC
TGCCCTACAGTCTGAACATGCACATCTGGTACGGCACCTATCTGGCTTCCACCGCATTGTTCCTGCGCCGGAGCACTACT
ATTGAAGAGGGGTTCCTGCTGGACGAACGCTTCCACTACGACATGGACGGGGAATATTACGCGCGCCTGGGCCGGGCGGG
GAAGAAGTTCGTGCATTACAACAGGCTGCTGGCGGATTTTCGCTGGCATGGCGACAATCTGAGCGCCCCCAATATCGAAT
GCCGGGACATGGACGCTGAGCTAAAGCGCCAGAAGCAGCACGGAGAGGATGCCGCCATCAAGCGCATTTACGGCCTTTCC
TTTTCCAAGCACAGCTGCAACAATATCATGGACGGCTTCATGCGTGAGGCCTACCGTATGAAAAAGGCCTTCCTTTATCT
TACCACTCCCTGGGAAAAGTAA

Upstream 100 bases:

>100_bases
TTTTGGGCCAATATCTGGCCAAAACCTATACGGAAGTTAAAAAGCGCCCTATTTACATCGCCAGGGAACGTTCCATCAAG
CCTTTCAACTAACCTTGCCT

Downstream 100 bases:

>100_bases
CCCGTTCTTTCCTGCTTCTCCCAGAAAAGCCGCTGCCTTCCCCCTTCATCCTCCCAAGGAAGGCACAGCCCCGATACGGC
AAGGGCCGCAGCCGTTATTA

Product: glycosyl transferase family 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MDTEPDFSIITPSYNYARYVRECIESVKNQEGATFEHIIQDAGSTDGTLDILHSYPHLKLHVEKDSGMSEGINRGFRKAR
GKWVMWLNTDDRLLPGALAAVKAFADSRPDADIVYGAWNFIGPDGEIQRAMKALPYSLNMHIWYGTYLASTALFLRRSTT
IEEGFLLDERFHYDMDGEYYARLGRAGKKFVHYNRLLADFRWHGDNLSAPNIECRDMDAELKRQKQHGEDAAIKRIYGLS
FSKHSCNNIMDGFMREAYRMKKAFLYLTTPWEK

Sequences:

>Translated_273_residues
MDTEPDFSIITPSYNYARYVRECIESVKNQEGATFEHIIQDAGSTDGTLDILHSYPHLKLHVEKDSGMSEGINRGFRKAR
GKWVMWLNTDDRLLPGALAAVKAFADSRPDADIVYGAWNFIGPDGEIQRAMKALPYSLNMHIWYGTYLASTALFLRRSTT
IEEGFLLDERFHYDMDGEYYARLGRAGKKFVHYNRLLADFRWHGDNLSAPNIECRDMDAELKRQKQHGEDAAIKRIYGLS
FSKHSCNNIMDGFMREAYRMKKAFLYLTTPWEK
>Mature_273_residues
MDTEPDFSIITPSYNYARYVRECIESVKNQEGATFEHIIQDAGSTDGTLDILHSYPHLKLHVEKDSGMSEGINRGFRKAR
GKWVMWLNTDDRLLPGALAAVKAFADSRPDADIVYGAWNFIGPDGEIQRAMKALPYSLNMHIWYGTYLASTALFLRRSTT
IEEGFLLDERFHYDMDGEYYARLGRAGKKFVHYNRLLADFRWHGDNLSAPNIECRDMDAELKRQKQHGEDAAIKRIYGLS
FSKHSCNNIMDGFMREAYRMKKAFLYLTTPWEK

Specific function: Involved in glycosylation steps downstream of mono-O- methyl-glycosyl-p-hydroxybenzoic acid derivative (p-HBAD I) and 2- O-methyl-rhamnosyl-phenolphthiocerol dimycocerosate (mycoside B) during the p-hydroxybenzoic acid derivatives (p-HBAD) and glycosylate

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=109, Percent_Identity=33.0275229357798, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 31519; Mature: 31519

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTEPDFSIITPSYNYARYVRECIESVKNQEGATFEHIIQDAGSTDGTLDILHSYPHLKL
CCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCEEE
HVEKDSGMSEGINRGFRKARGKWVMWLNTDDRLLPGALAAVKAFADSRPDADIVYGAWNF
EEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCC
IGPDGEIQRAMKALPYSLNMHIWYGTYLASTALFLRRSTTIEEGFLLDERFHYDMDGEYY
CCCCHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHCCCHHCCCEECCCCCCCCCHHHH
ARLGRAGKKFVHYNRLLADFRWHGDNLSAPNIECRDMDAELKRQKQHGEDAAIKRIYGLS
HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCC
FSKHSCNNIMDGFMREAYRMKKAFLYLTTPWEK
CCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
>Mature Secondary Structure
MDTEPDFSIITPSYNYARYVRECIESVKNQEGATFEHIIQDAGSTDGTLDILHSYPHLKL
CCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCEEE
HVEKDSGMSEGINRGFRKARGKWVMWLNTDDRLLPGALAAVKAFADSRPDADIVYGAWNF
EEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCC
IGPDGEIQRAMKALPYSLNMHIWYGTYLASTALFLRRSTTIEEGFLLDERFHYDMDGEYY
CCCCHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHCCCHHCCCEECCCCCCCCCHHHH
ARLGRAGKKFVHYNRLLADFRWHGDNLSAPNIECRDMDAELKRQKQHGEDAAIKRIYGLS
HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCC
FSKHSCNNIMDGFMREAYRMKKAFLYLTTPWEK
CCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]