Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736058
Identifier: 187736058
GI number: 187736058
Start: 1892977
End: 1893429
Strand: Reverse
Name: 187736058
Synonym: Amuc_1568
Alternate gene names: NA
Gene position: 1893429-1892977 (Counterclockwise)
Preceding gene: 187736059
Following gene: 187736056
Centisome position: 71.07
GC content: 59.82
Gene sequence:
>453_bases ATGATAACACTGGCCGCTACTTCAGCGGCAGCAGGTGCGGCATCCGCGTCTGCACAGAAAAAAAGCGCGGAAGCCACCAG ACAGGCGGCGGACGCAAATGCCGCCACCCTCAGAAACGAGGCAGACCTCCAAAAACAGACAGGGATGGAAAATGCCAAAC GCATGCAGCAGGACGCTGCGCGCCAAATGGGAGAAGCCCGACTGGACGCCGCCCAATCCTCCCTGCTCCGGGAAGGCTCC GTTCCACTCAGGGAACAGGCTTTGGCGACGCGTCTGCAAACCAGGATTCAGGATGAAGCGGCGGAAGCCATGAGGAACGC CCAATCCCTGTACAACCGCGCCAACACGGAGCAATACATGGGCCGCTCCAATGCGAGAGCCCAGAAAACCTCAGCAATGG GCACCCTGCTCTCCGGATTCGCCCAGGGAGGAAATACCCTCCTCAAATGGTGA
Upstream 100 bases:
>100_bases TGCCAAACCCTGATTCATGTCAAACGGTTCAGGCGTTTTGCGCCTGAACCGTTTTTCATATCAGAATGCGCGCATGGGAT TTGATCCAGCATCATTGGGA
Downstream 100 bases:
>100_bases AGTGCCTCACAAGGCACCTCCATTCAAACGAAGACAGCCGGAAATTCAGCCGCAACCGCGGAAGCTTCTTAACGCCCCCC CTGCCGGGCTGCCCCGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MITLAATSAAAGAASASAQKKSAEATRQAADANAATLRNEADLQKQTGMENAKRMQQDAARQMGEARLDAAQSSLLREGS VPLREQALATRLQTRIQDEAAEAMRNAQSLYNRANTEQYMGRSNARAQKTSAMGTLLSGFAQGGNTLLKW
Sequences:
>Translated_150_residues MITLAATSAAAGAASASAQKKSAEATRQAADANAATLRNEADLQKQTGMENAKRMQQDAARQMGEARLDAAQSSLLREGS VPLREQALATRLQTRIQDEAAEAMRNAQSLYNRANTEQYMGRSNARAQKTSAMGTLLSGFAQGGNTLLKW >Mature_150_residues MITLAATSAAAGAASASAQKKSAEATRQAADANAATLRNEADLQKQTGMENAKRMQQDAARQMGEARLDAAQSSLLREGS VPLREQALATRLQTRIQDEAAEAMRNAQSLYNRANTEQYMGRSNARAQKTSAMGTLLSGFAQGGNTLLKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15975; Mature: 15975
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLAATSAAAGAASASAQKKSAEATRQAADANAATLRNEADLQKQTGMENAKRMQQDAA CEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH RQMGEARLDAAQSSLLREGSVPLREQALATRLQTRIQDEAAEAMRNAQSLYNRANTEQYM HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GRSNARAQKTSAMGTLLSGFAQGGNTLLKW CCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MITLAATSAAAGAASASAQKKSAEATRQAADANAATLRNEADLQKQTGMENAKRMQQDAA CEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH RQMGEARLDAAQSSLLREGSVPLREQALATRLQTRIQDEAAEAMRNAQSLYNRANTEQYM HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GRSNARAQKTSAMGTLLSGFAQGGNTLLKW CCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA