Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736059
Identifier: 187736059
GI number: 187736059
Start: 1893539
End: 1894060
Strand: Reverse
Name: 187736059
Synonym: Amuc_1569
Alternate gene names: NA
Gene position: 1894060-1893539 (Counterclockwise)
Preceding gene: 187736060
Following gene: 187736058
Centisome position: 71.1
GC content: 53.45
Gene sequence:
>522_bases ATGCGCACCACACACTTGATCATTCTGACAATGGCCGCAGTTTCCCTGATGGGCTGCAATCCCAAGGAAACTGTAAACGC CCTCACTTCCGACCAGAACGTTACCCAGAAGATGGCCGTAAGATTCGCGGAAAATATGGTTGGCCTGCCACGCGCTCTGG TCGTTTCAGATGCCAGAAAAGCGGCTCCGGGCGACAAAGTCACCGTCAAGGGAGCGGTGATCGGAGATGACCCCGTCTTT TCAAAAAACATTGCTTCCTTCACCATCGGAGACCCGGCTCAGCTCCTGGTCAATATGAAGGAGAAGGGAGTCTGGGCCGC CGGTACGGTACCGGTAGAAATACGGAAAAATAACACGATGACCGTCCAGTTCGTGGATGAACAGGGGCAGCCCATCAAGC ACTCCGCCAAAGGTGTGAACGGGCTGAAAGAACAAGACGCCGTCATCATTACCGGAACCATTGATCCCCACTCCACTCCG GAACATCCGGTGCTGAACATTGAAAGCATCGTGATTGAGTAA
Upstream 100 bases:
>100_bases CTGCCGGGCTGTTCCTGTAAAAAATATTCTTTTCCTTACACGGAATGATGAACGGCAGAAGGGGAAAAGGAATCCAACCT TTCAACAGAAAGGAGTTTCC
Downstream 100 bases:
>100_bases CCCCTTCTGTGCCAAACCCTGATTCATGTCAAACGGTTCAGGCGTTTTGCGCCTGAACCGTTTTTCATATCAGAATGCGC GCATGGGATTTGATCCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MRTTHLIILTMAAVSLMGCNPKETVNALTSDQNVTQKMAVRFAENMVGLPRALVVSDARKAAPGDKVTVKGAVIGDDPVF SKNIASFTIGDPAQLLVNMKEKGVWAAGTVPVEIRKNNTMTVQFVDEQGQPIKHSAKGVNGLKEQDAVIITGTIDPHSTP EHPVLNIESIVIE
Sequences:
>Translated_173_residues MRTTHLIILTMAAVSLMGCNPKETVNALTSDQNVTQKMAVRFAENMVGLPRALVVSDARKAAPGDKVTVKGAVIGDDPVF SKNIASFTIGDPAQLLVNMKEKGVWAAGTVPVEIRKNNTMTVQFVDEQGQPIKHSAKGVNGLKEQDAVIITGTIDPHSTP EHPVLNIESIVIE >Mature_173_residues MRTTHLIILTMAAVSLMGCNPKETVNALTSDQNVTQKMAVRFAENMVGLPRALVVSDARKAAPGDKVTVKGAVIGDDPVF SKNIASFTIGDPAQLLVNMKEKGVWAAGTVPVEIRKNNTMTVQFVDEQGQPIKHSAKGVNGLKEQDAVIITGTIDPHSTP EHPVLNIESIVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18508; Mature: 18508
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTHLIILTMAAVSLMGCNPKETVNALTSDQNVTQKMAVRFAENMVGLPRALVVSDARK CCCCCEEHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHH AAPGDKVTVKGAVIGDDPVFSKNIASFTIGDPAQLLVNMKEKGVWAAGTVPVEIRKNNTM CCCCCEEEEEEEEECCCCCCCCCCCEEECCCHHHHHEEHHHCCEEEECCEEEEEECCCEE TVQFVDEQGQPIKHSAKGVNGLKEQDAVIITGTIDPHSTPEHPVLNIESIVIE EEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEHEEEEEC >Mature Secondary Structure MRTTHLIILTMAAVSLMGCNPKETVNALTSDQNVTQKMAVRFAENMVGLPRALVVSDARK CCCCCEEHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHH AAPGDKVTVKGAVIGDDPVFSKNIASFTIGDPAQLLVNMKEKGVWAAGTVPVEIRKNNTM CCCCCEEEEEEEEECCCCCCCCCCCEEECCCHHHHHEEHHHCCEEEECCEEEEEECCCEE TVQFVDEQGQPIKHSAKGVNGLKEQDAVIITGTIDPHSTPEHPVLNIESIVIE EEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA