Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736038

Identifier: 187736038

GI number: 187736038

Start: 1860743

End: 1862104

Strand: Reverse

Name: 187736038

Synonym: Amuc_1548

Alternate gene names: NA

Gene position: 1862104-1860743 (Counterclockwise)

Preceding gene: 187736044

Following gene: 187736033

Centisome position: 69.9

GC content: 55.65

Gene sequence:

>1362_bases
ATGATACACATGACTTTAAGAAAGAAAACTCTCTGGTTTCTTGGAGCTTTGAGCTTTTTTGCCTCTCTTGCCGCGGCTTT
CGCTGTTTTCTGGCTGAACAGGAATGATTCTTCTCCCGCGGAATGGAATTTCAACCCTATCTGGACAAAAGCGGAAAAAG
AACAAATTCTGACCGCAGCGAATTTCACAGCCCATCGAAGCCCGGAACGTTTCATTTACCGCGGGCTTTCCCTCAATTCA
CGCCATATTGACTGGCACATGTTTTCCGAGGTTTCCATGCGCCAATATATGAAGGACGAAATCAGGGAACGGCTTCAGAT
GATACGGGACACGGCGGAAAGCGCAGACGGACGCTGCATCACTCCATCCCATGAAACCCTGCTGCATCTCGCCGCCGGGC
TCGGAGAAGTGCAGTTGCTGAACCGCCTTTTACAGCGCCATGCGGACCCGAACGTTCAGATCATCCTGCCGCAACAGGCC
TTTCCCTCCATTCCGGACTCCGAACAGGGAAATACCCCCCTGACTTACGCCTGCCAGCCAGGCATGGACGACTCCACGCC
CCTGCCGGTGCATAACAGGCTCTCCTGCCTTAATCTCCTGATTCAGTACGGTGCGGATGTGAATAAACCGGGGCCGCTGG
GCTGGCCGCCCCTCGTCATCACCTGTGTGGCCGGTATTGGAGGAGCACCCTATGAGGAAGCGGCCCTGTTTCTTCTGAAA
TGCGGTGCGGATATTTCCCTCCAGCCTGAATTGAAAGGTAAAAAAACAAGTCTGCTCACATGGGCCACGGCCGCCGGATA
CCCCCTGCTGGTCCGCAAGCTTTGCGAAGCCGGGTACGATCCCAATTTCCGCGGGGAAATGGCCCCGCCCCTTCTTTCCC
TGAACCTGAACACTCCGAACGCCGCACTGCAAATTGCACATATTCTGCTGGAATACGGAGCGGACGTGAATGCGGCCATG
CCCGCGTCCACCACCCTGCCGGAAACCGCGGGAGACACGGCCCTGCTGAACCTGTGCCGCCAGCTGGCTTTCATTGATGT
GTCCTGCCTCCCTCAAATCAGGGATCTGGTCAATCTCTTCATCAAAGAGGGAGCTGACGTCAACCATCAAAACGCCGCCG
GAGAAACTCCCCTCATGGCATGCTGCCGAGGCATGCTGCTGGGAGACGATTCCCTGGACCGGCTGAAACTGGGTATTGCG
CGTCTTCTGCTGGACCACCACGCAAACCCATCCCTGAAAGACAAATACGGACGCACAGCCCTCCAGAGGATAGGCAACCG
GTCAAACGAACATCTCCAGATGGTGCTGAAATACCTGCCGGAATTAAGCGCTCCGCCGCTTCCGAAGAAGGAAAACCATT
GA

Upstream 100 bases:

>100_bases
TTCCCACATGGTTTGCCCCGGGCATTCTTTGCTCATACTATTTTTTCATTGCCCGGAGTTATGGATTCCTGCATCATGGC
CTTTCGCAGTACCCCTGCTT

Downstream 100 bases:

>100_bases
ATCCCGCCGCTCCTTACTTCACCCGGGCATTCACCGTATCCAGCAGAATGCCGGCATCCGGTTGGGACCCGGTGCTGATG
AAATGGATATAACTGGCTCC

Product: Ankyrin

Products: NA

Alternate protein names: Ankyrin Repeat-Containing Protein

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MIHMTLRKKTLWFLGALSFFASLAAAFAVFWLNRNDSSPAEWNFNPIWTKAEKEQILTAANFTAHRSPERFIYRGLSLNS
RHIDWHMFSEVSMRQYMKDEIRERLQMIRDTAESADGRCITPSHETLLHLAAGLGEVQLLNRLLQRHADPNVQIILPQQA
FPSIPDSEQGNTPLTYACQPGMDDSTPLPVHNRLSCLNLLIQYGADVNKPGPLGWPPLVITCVAGIGGAPYEEAALFLLK
CGADISLQPELKGKKTSLLTWATAAGYPLLVRKLCEAGYDPNFRGEMAPPLLSLNLNTPNAALQIAHILLEYGADVNAAM
PASTTLPETAGDTALLNLCRQLAFIDVSCLPQIRDLVNLFIKEGADVNHQNAAGETPLMACCRGMLLGDDSLDRLKLGIA
RLLLDHHANPSLKDKYGRTALQRIGNRSNEHLQMVLKYLPELSAPPLPKKENH

Sequences:

>Translated_453_residues
MIHMTLRKKTLWFLGALSFFASLAAAFAVFWLNRNDSSPAEWNFNPIWTKAEKEQILTAANFTAHRSPERFIYRGLSLNS
RHIDWHMFSEVSMRQYMKDEIRERLQMIRDTAESADGRCITPSHETLLHLAAGLGEVQLLNRLLQRHADPNVQIILPQQA
FPSIPDSEQGNTPLTYACQPGMDDSTPLPVHNRLSCLNLLIQYGADVNKPGPLGWPPLVITCVAGIGGAPYEEAALFLLK
CGADISLQPELKGKKTSLLTWATAAGYPLLVRKLCEAGYDPNFRGEMAPPLLSLNLNTPNAALQIAHILLEYGADVNAAM
PASTTLPETAGDTALLNLCRQLAFIDVSCLPQIRDLVNLFIKEGADVNHQNAAGETPLMACCRGMLLGDDSLDRLKLGIA
RLLLDHHANPSLKDKYGRTALQRIGNRSNEHLQMVLKYLPELSAPPLPKKENH
>Mature_453_residues
MIHMTLRKKTLWFLGALSFFASLAAAFAVFWLNRNDSSPAEWNFNPIWTKAEKEQILTAANFTAHRSPERFIYRGLSLNS
RHIDWHMFSEVSMRQYMKDEIRERLQMIRDTAESADGRCITPSHETLLHLAAGLGEVQLLNRLLQRHADPNVQIILPQQA
FPSIPDSEQGNTPLTYACQPGMDDSTPLPVHNRLSCLNLLIQYGADVNKPGPLGWPPLVITCVAGIGGAPYEEAALFLLK
CGADISLQPELKGKKTSLLTWATAAGYPLLVRKLCEAGYDPNFRGEMAPPLLSLNLNTPNAALQIAHILLEYGADVNAAM
PASTTLPETAGDTALLNLCRQLAFIDVSCLPQIRDLVNLFIKEGADVNHQNAAGETPLMACCRGMLLGDDSLDRLKLGIA
RLLLDHHANPSLKDKYGRTALQRIGNRSNEHLQMVLKYLPELSAPPLPKKENH

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32967601, Length=376, Percent_Identity=26.8617021276596, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI38683807, Length=308, Percent_Identity=29.2207792207792, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI38683816, Length=308, Percent_Identity=29.2207792207792, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI28571867, Length=259, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=6e-11,
Organism=Drosophila melanogaster, GI28571865, Length=259, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50131; Mature: 50131

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHMTLRKKTLWFLGALSFFASLAAAFAVFWLNRNDSSPAEWNFNPIWTKAEKEQILTAA
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
NFTAHRSPERFIYRGLSLNSRHIDWHMFSEVSMRQYMKDEIRERLQMIRDTAESADGRCI
CCHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
TPSHETLLHLAAGLGEVQLLNRLLQRHADPNVQIILPQQAFPSIPDSEQGNTPLTYACQP
CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCCCCEEEEECC
GMDDSTPLPVHNRLSCLNLLIQYGADVNKPGPLGWPPLVITCVAGIGGAPYEEAALFLLK
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHC
CGADISLQPELKGKKTSLLTWATAAGYPLLVRKLCEAGYDPNFRGEMAPPLLSLNLNTPN
CCCCCEECCCCCCCCCCEEEEHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCH
AALQIAHILLEYGADVNAAMPASTTLPETAGDTALLNLCRQLAFIDVSCLPQIRDLVNLF
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IKEGADVNHQNAAGETPLMACCRGMLLGDDSLDRLKLGIARLLLDHHANPSLKDKYGRTA
HHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LQRIGNRSNEHLQMVLKYLPELSAPPLPKKENH
HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MIHMTLRKKTLWFLGALSFFASLAAAFAVFWLNRNDSSPAEWNFNPIWTKAEKEQILTAA
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
NFTAHRSPERFIYRGLSLNSRHIDWHMFSEVSMRQYMKDEIRERLQMIRDTAESADGRCI
CCHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
TPSHETLLHLAAGLGEVQLLNRLLQRHADPNVQIILPQQAFPSIPDSEQGNTPLTYACQP
CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCCCCEEEEECC
GMDDSTPLPVHNRLSCLNLLIQYGADVNKPGPLGWPPLVITCVAGIGGAPYEEAALFLLK
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHC
CGADISLQPELKGKKTSLLTWATAAGYPLLVRKLCEAGYDPNFRGEMAPPLLSLNLNTPN
CCCCCEECCCCCCCCCCEEEEHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCH
AALQIAHILLEYGADVNAAMPASTTLPETAGDTALLNLCRQLAFIDVSCLPQIRDLVNLF
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IKEGADVNHQNAAGETPLMACCRGMLLGDDSLDRLKLGIARLLLDHHANPSLKDKYGRTA
HHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LQRIGNRSNEHLQMVLKYLPELSAPPLPKKENH
HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA