Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736044
Identifier: 187736044
GI number: 187736044
Start: 1866457
End: 1866837
Strand: Reverse
Name: 187736044
Synonym: Amuc_1554
Alternate gene names: NA
Gene position: 1866837-1866457 (Counterclockwise)
Preceding gene: 187736051
Following gene: 187736038
Centisome position: 70.07
GC content: 53.02
Gene sequence:
>381_bases ATGTACATTCCCACACAGGAAGAACGGTATGCAAAAAAAGGGGTTGTTTCCCTCATCCTGTGCGTTGTAGTCCCTTCCTG CCTGTATGTCTCTCTTCTGTCCAAGCAGCTGATGATGGTACGCGGGCATGAATGGGAAGCTGTCATGAAACTCTTTCTGG CATTCACCTACCCGCTGGCGGCCCTCTTCGCCATGACGGGCATTCCGTTCTTCTGGTGGTCTGTGGGCATCTCTCTGGCG GTTCATGCCGGCATCGTCGCCTGGCTGAAAACAACGCCTCTCCTGTCCCCTAAAAAAGCCGTCTGCATCGCCCTGTGCCT GGGGATGCTGGACTTTCTGTTCGTGAAACTATTTCCTTTTCCGGCACAAATCATGGGATAA
Upstream 100 bases:
>100_bases TCAAAAGACGACATACGCAATGCCGTCAGTATATTGCTCCCGCCCCGCCGGGCTAGGACAATGTTTGACAATTTTCCCCT CCTGACCCAGTATATGCGGC
Downstream 100 bases:
>100_bases GCCTGCCCGGGAAAATATTTGGGATATTCCATCCTCCGGTTCAGGACTGCTTTAACTGGCTCGAGAATTTTCTTAATTTC ACGCCTCGTTGTTTGGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MYIPTQEERYAKKGVVSLILCVVVPSCLYVSLLSKQLMMVRGHEWEAVMKLFLAFTYPLAALFAMTGIPFFWWSVGISLA VHAGIVAWLKTTPLLSPKKAVCIALCLGMLDFLFVKLFPFPAQIMG
Sequences:
>Translated_126_residues MYIPTQEERYAKKGVVSLILCVVVPSCLYVSLLSKQLMMVRGHEWEAVMKLFLAFTYPLAALFAMTGIPFFWWSVGISLA VHAGIVAWLKTTPLLSPKKAVCIALCLGMLDFLFVKLFPFPAQIMG >Mature_126_residues MYIPTQEERYAKKGVVSLILCVVVPSCLYVSLLSKQLMMVRGHEWEAVMKLFLAFTYPLAALFAMTGIPFFWWSVGISLA VHAGIVAWLKTTPLLSPKKAVCIALCLGMLDFLFVKLFPFPAQIMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14074; Mature: 14074
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIPTQEERYAKKGVVSLILCVVVPSCLYVSLLSKQLMMVRGHEWEAVMKLFLAFTYPLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ALFAMTGIPFFWWSVGISLAVHAGIVAWLKTTPLLSPKKAVCIALCLGMLDFLFVKLFPF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC PAQIMG CHHHCC >Mature Secondary Structure MYIPTQEERYAKKGVVSLILCVVVPSCLYVSLLSKQLMMVRGHEWEAVMKLFLAFTYPLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ALFAMTGIPFFWWSVGISLAVHAGIVAWLKTTPLLSPKKAVCIALCLGMLDFLFVKLFPF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC PAQIMG CHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA