Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736010
Identifier: 187736010
GI number: 187736010
Start: 1817510
End: 1818112
Strand: Direct
Name: 187736010
Synonym: Amuc_1520
Alternate gene names: NA
Gene position: 1817510-1818112 (Clockwise)
Preceding gene: 187736009
Following gene: 187736011
Centisome position: 68.22
GC content: 50.91
Gene sequence:
>603_bases ATGTACGGACTGCCCATCACTACGGAACGCAAGAAGCAATTGCCGAAAAAGGCCGTATATGCGAAGTTCGACCTGAAGCC CTCGCAGCGCGACGGCTTCGATGCCGATGTGAGCCGCATGGATATTGTGGCGGTCTTGTCTCCGGCAACATTGCCGGCCA TTGCGGCGGGAGAAAACATCAAGGACATCTATATGCTTGCCGTGCAGCTGAAGCGGAAGGATTACGATAGCAAGAGCATC GCCCTGTTATCCCGGCTCATTCCGCAGAATATCCTGTTTGCCTTGCAGTTTGAGGCGGACACGCAATTCGCCGTTTATCA TGCCGACAGGCTTATCCGTTCCGCATGGATGCCGACAGGGGAAGCGAAGATTGCGTTTTCGGGATTGAATCTGGATGCCG TTTGGGAGAATATCGTGAAGAGCATCGGCGGCATTGAGATGGAACAGGGCAAGACTCTTACACAGCAGATACAAACCAAT GAACAACGAGCGAAAACCCTTGCTCAGATTGCTGCTTTGGTGCGGAAGATGGCAAGTGAGAAACAGCCTCGGCGCAAACG GGAGTATTTTGAAATAATCAAAAAACTAAAATCAAACCTATAA
Upstream 100 bases:
>100_bases TCGACAGTTTCCTGAGCGGCGTGCAAGGTTTGCTCTTCACGGAAGAGATACGCGGGCTGGACGACTTTGAATTAATCTGT TTTCTCGTCATCAAGTGAGT
Downstream 100 bases:
>100_bases ATGGACAAATTGAAAATGCAGAGCCACGATGTGACAAGCTCCAACATAAATAAGATAGCGCGATTGTTCCCGAACTGCGT TACGGAACGGTTAGGTAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MYGLPITTERKKQLPKKAVYAKFDLKPSQRDGFDADVSRMDIVAVLSPATLPAIAAGENIKDIYMLAVQLKRKDYDSKSI ALLSRLIPQNILFALQFEADTQFAVYHADRLIRSAWMPTGEAKIAFSGLNLDAVWENIVKSIGGIEMEQGKTLTQQIQTN EQRAKTLAQIAALVRKMASEKQPRRKREYFEIIKKLKSNL
Sequences:
>Translated_200_residues MYGLPITTERKKQLPKKAVYAKFDLKPSQRDGFDADVSRMDIVAVLSPATLPAIAAGENIKDIYMLAVQLKRKDYDSKSI ALLSRLIPQNILFALQFEADTQFAVYHADRLIRSAWMPTGEAKIAFSGLNLDAVWENIVKSIGGIEMEQGKTLTQQIQTN EQRAKTLAQIAALVRKMASEKQPRRKREYFEIIKKLKSNL >Mature_200_residues MYGLPITTERKKQLPKKAVYAKFDLKPSQRDGFDADVSRMDIVAVLSPATLPAIAAGENIKDIYMLAVQLKRKDYDSKSI ALLSRLIPQNILFALQFEADTQFAVYHADRLIRSAWMPTGEAKIAFSGLNLDAVWENIVKSIGGIEMEQGKTLTQQIQTN EQRAKTLAQIAALVRKMASEKQPRRKREYFEIIKKLKSNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22614; Mature: 22614
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGLPITTERKKQLPKKAVYAKFDLKPSQRDGFDADVSRMDIVAVLSPATLPAIAAGENI CCCCCCCCHHHHCCCHHHHHEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCH KDIYMLAVQLKRKDYDSKSIALLSRLIPQNILFALQFEADTQFAVYHADRLIRSAWMPTG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCC EAKIAFSGLNLDAVWENIVKSIGGIEMEQGKTLTQQIQTNEQRAKTLAQIAALVRKMASE CCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KQPRRKREYFEIIKKLKSNL CCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYGLPITTERKKQLPKKAVYAKFDLKPSQRDGFDADVSRMDIVAVLSPATLPAIAAGENI CCCCCCCCHHHHCCCHHHHHEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCH KDIYMLAVQLKRKDYDSKSIALLSRLIPQNILFALQFEADTQFAVYHADRLIRSAWMPTG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCC EAKIAFSGLNLDAVWENIVKSIGGIEMEQGKTLTQQIQTNEQRAKTLAQIAALVRKMASE CCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KQPRRKREYFEIIKKLKSNL CCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA