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The map label for this gene is ompA [C]

Identifier: 187736002

GI number: 187736002

Start: 1804183

End: 1805619

Strand: Direct

Name: ompA [C]

Synonym: Amuc_1512

Alternate gene names: 187736002

Gene position: 1804183-1805619 (Clockwise)

Preceding gene: 187736001

Following gene: 187736003

Centisome position: 67.72

GC content: 57.69

Gene sequence:

>1437_bases
ATGAATTGTTCCTTTCCTTTTGCTGATGATCCCGTGAGTGCGAATCAGGACAACAACCGAGAACTCCGCGAAAACCGCCG
CAGGCGCAGCCGTTTTATTCTGCCCGCGCCTCGCCATCTGGCAGCTGTGGCGGCAGGGGCTCTCCTTGCCGCCGTGCTGG
TGCATTACCTGGGGTTTATCGTTCTGAGCTGGTTTGATCTGGGCATTCATGTGCACAAAGCCCCCACTGTCCAGGAGGAC
AGAAAGCCTCTGCCTGAAAAAATAGTTCTGAAGGCGGACGACCGTCCTGCTCCGGATGTAGCGGAAGCCGTTGAAAAACC
GGATATTGAGCAACTTGAAGAGATTCCCCCGGAATTGCCGGATTTAGAGGATATGCTTCCGGAGCAGGTAGTGATTGCTC
CGGGGGAAACCAGCTTTTCCGCAGATCCGGTAAGTCCTTCCCCCCCGGAATCCCTTTCCCCGAAAATGCCGCAGGTGGAC
ATGAATGCCGTCGCGAAGGGGTTGCCCGAACCCTCTCCGCCTGAGATGCTGAAATCTTCCGCCAGTCCGGTTACAATCAA
GACGGCTGAACCGGATATGGTGAATCCGGATGAATGGTATAACAATAAGCTCAAAGGGGCGGGCGGTCAGGATGATTCCC
ATTTGCCGGATGGGAGCAAATCTCTTTCCCAGCTCATGGCCCAGTCCTCCTTGGGCAAGGACAGCGGGTACAGCAGGCTG
GGAGCGGATCTTCTTTTTGAATACAACAAGGCGGTGATGAAAAATTCCGCCAGGCTGAGCATGCTTCAGCTTGCGGGACT
GATGATGAAAAATCCGGATACGATTTTCATTGTGGAAGGTCATACGGACAGCTTTGGTTCCGAGGAATATAATGCCGTGC
TTTCCCTGATGCGTGCTAATGCCGTCCGCCAGTGGCTGAAGGATAACGGCATAGCTCTGACGCGCCCGAATGGGGAATGC
AGATTGTACATACGCGCTTGCGGCTCTTCCCGTCCCGTCGTTTCCATCAGGGGAGACCGGGATGCCCAGGCCGCCAACCG
GAGGGTGGAAATCCACATGCGCAAGCCGGGAGAGGAAATACCCGCCGGGAGCCTGCCCCTTACGTATGCGGTGGATATGA
GCACCCCTGTCGCCCGCCAGGTGCGTGCCGGAGTGGGCGCCCGCGCCGGAATTCCCTCCTCCGCGGCAGAAAGGAAAGCG
CCCCCCGCAGGGCGTTCATCTTCTGCCTCCCCGGAACGCCGGGAAAATCCTGCGCTGCGTCAGGAAGTAATTCCTGAGGC
GGAACCCATTCCGGAAACGATTCCTTCGGCAGAGCCTGTGGAGGAACGCATCCCTTCGGCAGAGCCGGTAGAGGATGACA
TCCCGCTGGCTGAACCCGTCGTGTGTGCGGGGAGCCGCGCCGTAGTGAAGGGAGGTGCCGGATTGAGATGGAATTGA

Upstream 100 bases:

>100_bases
TTGCGGAATGGATTCATGAGAATACGCGTATGCCCATGCCCAGGGTGTTGCCTCATGAGTCTTACAGTGCGCCCGTTACG
GGTACCGCTCCTTCCGGTTC

Downstream 100 bases:

>100_bases
TGCGTGTCCTTCCGGTTCGGGCGCTGCCGAAACCCGAACGGCTCCGGTATCTTTTCTCCTTTGATTTTGACGATACTCTG
TTCACTCTTGGAGGCCCTGC

Product: OmpA/MotB domain protein

Products: NA

Alternate protein names: Lipoprotein; OmpA/MotB Domain-Containing Protein

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MNCSFPFADDPVSANQDNNRELRENRRRRSRFILPAPRHLAAVAAGALLAAVLVHYLGFIVLSWFDLGIHVHKAPTVQED
RKPLPEKIVLKADDRPAPDVAEAVEKPDIEQLEEIPPELPDLEDMLPEQVVIAPGETSFSADPVSPSPPESLSPKMPQVD
MNAVAKGLPEPSPPEMLKSSASPVTIKTAEPDMVNPDEWYNNKLKGAGGQDDSHLPDGSKSLSQLMAQSSLGKDSGYSRL
GADLLFEYNKAVMKNSARLSMLQLAGLMMKNPDTIFIVEGHTDSFGSEEYNAVLSLMRANAVRQWLKDNGIALTRPNGEC
RLYIRACGSSRPVVSIRGDRDAQAANRRVEIHMRKPGEEIPAGSLPLTYAVDMSTPVARQVRAGVGARAGIPSSAAERKA
PPAGRSSSASPERRENPALRQEVIPEAEPIPETIPSAEPVEERIPSAEPVEDDIPLAEPVVCAGSRAVVKGGAGLRWN

Sequences:

>Translated_478_residues
MNCSFPFADDPVSANQDNNRELRENRRRRSRFILPAPRHLAAVAAGALLAAVLVHYLGFIVLSWFDLGIHVHKAPTVQED
RKPLPEKIVLKADDRPAPDVAEAVEKPDIEQLEEIPPELPDLEDMLPEQVVIAPGETSFSADPVSPSPPESLSPKMPQVD
MNAVAKGLPEPSPPEMLKSSASPVTIKTAEPDMVNPDEWYNNKLKGAGGQDDSHLPDGSKSLSQLMAQSSLGKDSGYSRL
GADLLFEYNKAVMKNSARLSMLQLAGLMMKNPDTIFIVEGHTDSFGSEEYNAVLSLMRANAVRQWLKDNGIALTRPNGEC
RLYIRACGSSRPVVSIRGDRDAQAANRRVEIHMRKPGEEIPAGSLPLTYAVDMSTPVARQVRAGVGARAGIPSSAAERKA
PPAGRSSSASPERRENPALRQEVIPEAEPIPETIPSAEPVEERIPSAEPVEDDIPLAEPVVCAGSRAVVKGGAGLRWN
>Mature_478_residues
MNCSFPFADDPVSANQDNNRELRENRRRRSRFILPAPRHLAAVAAGALLAAVLVHYLGFIVLSWFDLGIHVHKAPTVQED
RKPLPEKIVLKADDRPAPDVAEAVEKPDIEQLEEIPPELPDLEDMLPEQVVIAPGETSFSADPVSPSPPESLSPKMPQVD
MNAVAKGLPEPSPPEMLKSSASPVTIKTAEPDMVNPDEWYNNKLKGAGGQDDSHLPDGSKSLSQLMAQSSLGKDSGYSRL
GADLLFEYNKAVMKNSARLSMLQLAGLMMKNPDTIFIVEGHTDSFGSEEYNAVLSLMRANAVRQWLKDNGIALTRPNGEC
RLYIRACGSSRPVVSIRGDRDAQAANRRVEIHMRKPGEEIPAGSLPLTYAVDMSTPVARQVRAGVGARAGIPSSAAERKA
PPAGRSSSASPERRENPALRQEVIPEAEPIPETIPSAEPVEERIPSAEPVEDDIPLAEPVVCAGSRAVVKGGAGLRWN

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51707; Mature: 51707

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCSFPFADDPVSANQDNNRELRENRRRRSRFILPAPRHLAAVAAGALLAAVLVHYLGFI
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VLSWFDLGIHVHKAPTVQEDRKPLPEKIVLKADDRPAPDVAEAVEKPDIEQLEEIPPELP
HHHHHHHCEEEECCCCCCHHCCCCCCEEEEECCCCCCCHHHHHHCCCCHHHHHHCCCCCC
DLEDMLPEQVVIAPGETSFSADPVSPSPPESLSPKMPQVDMNAVAKGLPEPSPPEMLKSS
CHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCC
ASPVTIKTAEPDMVNPDEWYNNKLKGAGGQDDSHLPDGSKSLSQLMAQSSLGKDSGYSRL
CCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH
GADLLFEYNKAVMKNSARLSMLQLAGLMMKNPDTIFIVEGHTDSFGSEEYNAVLSLMRAN
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
AVRQWLKDNGIALTRPNGECRLYIRACGSSRPVVSIRGDRDAQAANRRVEIHMRKPGEEI
HHHHHHHCCCEEEECCCCCEEEEEEECCCCCCEEEECCCCCHHHCCCEEEEEECCCCCCC
PAGSLPLTYAVDMSTPVARQVRAGVGARAGIPSSAAERKAPPAGRSSSASPERRENPALR
CCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCHHH
QEVIPEAEPIPETIPSAEPVEERIPSAEPVEDDIPLAEPVVCAGSRAVVKGGAGLRWN
HHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCC
>Mature Secondary Structure
MNCSFPFADDPVSANQDNNRELRENRRRRSRFILPAPRHLAAVAAGALLAAVLVHYLGFI
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VLSWFDLGIHVHKAPTVQEDRKPLPEKIVLKADDRPAPDVAEAVEKPDIEQLEEIPPELP
HHHHHHHCEEEECCCCCCHHCCCCCCEEEEECCCCCCCHHHHHHCCCCHHHHHHCCCCCC
DLEDMLPEQVVIAPGETSFSADPVSPSPPESLSPKMPQVDMNAVAKGLPEPSPPEMLKSS
CHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCC
ASPVTIKTAEPDMVNPDEWYNNKLKGAGGQDDSHLPDGSKSLSQLMAQSSLGKDSGYSRL
CCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH
GADLLFEYNKAVMKNSARLSMLQLAGLMMKNPDTIFIVEGHTDSFGSEEYNAVLSLMRAN
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
AVRQWLKDNGIALTRPNGECRLYIRACGSSRPVVSIRGDRDAQAANRRVEIHMRKPGEEI
HHHHHHHCCCEEEECCCCCEEEEEEECCCCCCEEEECCCCCHHHCCCEEEEEECCCCCCC
PAGSLPLTYAVDMSTPVARQVRAGVGARAGIPSSAAERKAPPAGRSSSASPERRENPALR
CCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCHHH
QEVIPEAEPIPETIPSAEPVEERIPSAEPVEDDIPLAEPVVCAGSRAVVKGGAGLRWN
HHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA