Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736001
Identifier: 187736001
GI number: 187736001
Start: 1803074
End: 1804186
Strand: Direct
Name: 187736001
Synonym: Amuc_1511
Alternate gene names: NA
Gene position: 1803074-1804186 (Clockwise)
Preceding gene: 187735997
Following gene: 187736002
Centisome position: 67.68
GC content: 55.26
Gene sequence:
>1113_bases ATGTTCAAACGTCTTGTTCAATTGTTTCTTCTGTTTTTTCTGGCTGCTGCGGGTGTTCTGGCGTGGTTTGCTTGGTACGT CTCCACTCCCCTGCTCATTCCCGTGGGAGGGGAGGAACCCGCCTCTTCTCCCGTTGCGGGTTCCCTGGTGATGGAACCCG TGGAAGCCGTTTCATCCGATGGCACGGCTATTGAAGGTTATCTGGTGAGCCCGGGGCGTCCGGAGGCTTTGTCTCCGCGC CAGAGCCGCGTGCGGGATACTCTGAAATTGCGCGGGAAAATGCCGCATTTGGAGGCAAAACCGGAGCTGGTTGTGATAGC CGCTTCTTGGAATGAGGGAGTGGAAAGTTCCCTCCCTCTGGCGGAAGGGCTGGCAGGAGCCGGTTACACGAGCCTGATAT GGAATCCGCGCGGGAAGAACAATACCCGTCAATTCTGCACGTACGGATTAAGGGAATATGCGGATGTAACGGCGCTTTTG GACGCCGTATCCCGGAAGCAGGGCGGATTGCCTCCCGTGGCTGCCGTGGGGCAGGGATTTGGTGCGGCCGTGCTGTTGAA AGCCGCGTCTGAAGATCCCCGCATCCGCTGCATGGTCAGCATGGACTGCTTTCCTTCCCTGAAAACCGTGGCTGTCCGGG AGATGGAGCAGGATTGGGGCAAGCCTCTGTGCTATGCCGCTTATTGGCTGCTGGATGCCGGGGTGGATTGGCGTGCGGGG TTCAGTACGTTTGACGTGGCTCCCGTGGATGATGCCCTGAAATTGGATTATCCGGTCATGGTGGTTTGTACGAACCAATA TTTTTTCTCCACGCTGGAAGATTGCCTGAGCATTTACGATTCCCTGAAAAATGAGAAAAAACAGCTTTATGAATCCATCC GGGAAGGGGAACCGTATGGCACCCGGGAACGGACTTTCCTGCATTCCATTGAAGGAAAGAAGGGGGAAAAATTTGAAAAA ATTTATAAGGTCAACGTCTATGCGGGGGATGACGAGCTGCAGGCTGGCATTGCGGAATGGATTCATGAGAATACGCGTAT GCCCATGCCCAGGGTGTTGCCTCATGAGTCTTACAGTGCGCCCGTTACGGGTACCGCTCCTTCCGGTTCATGA
Upstream 100 bases:
>100_bases GCTGCTGGAGATGTTCCGCCTGATAGAAGTTGGCTGTTGTCAACGTAAACTGGATGAGATAAAATCTTCCTGACAACTGT TTCCCGGCAACAGCCTTTCC
Downstream 100 bases:
>100_bases ATTGTTCCTTTCCTTTTGCTGATGATCCCGTGAGTGCGAATCAGGACAACAACCGAGAACTCCGCGAAAACCGCCGCAGG CGCAGCCGTTTTATTCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MFKRLVQLFLLFFLAAAGVLAWFAWYVSTPLLIPVGGEEPASSPVAGSLVMEPVEAVSSDGTAIEGYLVSPGRPEALSPR QSRVRDTLKLRGKMPHLEAKPELVVIAASWNEGVESSLPLAEGLAGAGYTSLIWNPRGKNNTRQFCTYGLREYADVTALL DAVSRKQGGLPPVAAVGQGFGAAVLLKAASEDPRIRCMVSMDCFPSLKTVAVREMEQDWGKPLCYAAYWLLDAGVDWRAG FSTFDVAPVDDALKLDYPVMVVCTNQYFFSTLEDCLSIYDSLKNEKKQLYESIREGEPYGTRERTFLHSIEGKKGEKFEK IYKVNVYAGDDELQAGIAEWIHENTRMPMPRVLPHESYSAPVTGTAPSGS
Sequences:
>Translated_370_residues MFKRLVQLFLLFFLAAAGVLAWFAWYVSTPLLIPVGGEEPASSPVAGSLVMEPVEAVSSDGTAIEGYLVSPGRPEALSPR QSRVRDTLKLRGKMPHLEAKPELVVIAASWNEGVESSLPLAEGLAGAGYTSLIWNPRGKNNTRQFCTYGLREYADVTALL DAVSRKQGGLPPVAAVGQGFGAAVLLKAASEDPRIRCMVSMDCFPSLKTVAVREMEQDWGKPLCYAAYWLLDAGVDWRAG FSTFDVAPVDDALKLDYPVMVVCTNQYFFSTLEDCLSIYDSLKNEKKQLYESIREGEPYGTRERTFLHSIEGKKGEKFEK IYKVNVYAGDDELQAGIAEWIHENTRMPMPRVLPHESYSAPVTGTAPSGS >Mature_370_residues MFKRLVQLFLLFFLAAAGVLAWFAWYVSTPLLIPVGGEEPASSPVAGSLVMEPVEAVSSDGTAIEGYLVSPGRPEALSPR QSRVRDTLKLRGKMPHLEAKPELVVIAASWNEGVESSLPLAEGLAGAGYTSLIWNPRGKNNTRQFCTYGLREYADVTALL DAVSRKQGGLPPVAAVGQGFGAAVLLKAASEDPRIRCMVSMDCFPSLKTVAVREMEQDWGKPLCYAAYWLLDAGVDWRAG FSTFDVAPVDDALKLDYPVMVVCTNQYFFSTLEDCLSIYDSLKNEKKQLYESIREGEPYGTRERTFLHSIEGKKGEKFEK IYKVNVYAGDDELQAGIAEWIHENTRMPMPRVLPHESYSAPVTGTAPSGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40633; Mature: 40633
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKRLVQLFLLFFLAAAGVLAWFAWYVSTPLLIPVGGEEPASSPVAGSLVMEPVEAVSSD CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCC GTAIEGYLVSPGRPEALSPRQSRVRDTLKLRGKMPHLEAKPELVVIAASWNEGVESSLPL CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCH AEGLAGAGYTSLIWNPRGKNNTRQFCTYGLREYADVTALLDAVSRKQGGLPPVAAVGQGF HHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC GAAVLLKAASEDPRIRCMVSMDCFPSLKTVAVREMEQDWGKPLCYAAYWLLDAGVDWRAG CCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC FSTFDVAPVDDALKLDYPVMVVCTNQYFFSTLEDCLSIYDSLKNEKKQLYESIREGEPYG CCCCCCCCCCCHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TRERTFLHSIEGKKGEKFEKIYKVNVYAGDDELQAGIAEWIHENTRMPMPRVLPHESYSA CHHHHHHHHCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC PVTGTAPSGS CCCCCCCCCC >Mature Secondary Structure MFKRLVQLFLLFFLAAAGVLAWFAWYVSTPLLIPVGGEEPASSPVAGSLVMEPVEAVSSD CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCC GTAIEGYLVSPGRPEALSPRQSRVRDTLKLRGKMPHLEAKPELVVIAASWNEGVESSLPL CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCH AEGLAGAGYTSLIWNPRGKNNTRQFCTYGLREYADVTALLDAVSRKQGGLPPVAAVGQGF HHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC GAAVLLKAASEDPRIRCMVSMDCFPSLKTVAVREMEQDWGKPLCYAAYWLLDAGVDWRAG CCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC FSTFDVAPVDDALKLDYPVMVVCTNQYFFSTLEDCLSIYDSLKNEKKQLYESIREGEPYG CCCCCCCCCCCHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TRERTFLHSIEGKKGEKFEKIYKVNVYAGDDELQAGIAEWIHENTRMPMPRVLPHESYSA CHHHHHHHHCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC PVTGTAPSGS CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA