Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736003
Identifier: 187736003
GI number: 187736003
Start: 1805619
End: 1806485
Strand: Direct
Name: 187736003
Synonym: Amuc_1513
Alternate gene names: NA
Gene position: 1805619-1806485 (Clockwise)
Preceding gene: 187736002
Following gene: 187736004
Centisome position: 67.78
GC content: 57.21
Gene sequence:
>867_bases ATGCGTGTCCTTCCGGTTCGGGCGCTGCCGAAACCCGAACGGCTCCGGTATCTTTTCTCCTTTGATTTTGACGATACTCT GTTCACTCTTGGAGGCCCTGCGGAAGAAAGGAGCATTTTTTTCAGAACCATGCGCATGCTCCGGTCGCAGTATGGTGTTC TCTGGGGCGTTAATACGGGGCGCGACCCTGTCTACCTGAGGGAAGGTCTGGCGGATATGTTCCGGGATGATGCGGAAGCG TTTGCCCCGGATTTTACGGTGACGATGGAACGGAATGTTCATCTGGCGGATGCGGAGGGCAGGCTGATGCCCGGCGCCGC GTGGAACGATGACTGCGCTGTTGCCCATGACAGCTTGTTCACCCGTTACGGCGGCATGCTGGAATCATTGATGGGCCAGC TGGAAAGCCGGTTTTCCGGGCTGGGACTTCGCAGGCAGGACAATGACGCTTTTTCCCTGGTGGTGGATGATGCCTGCGGC CTGGATGAAGTTTCCTGCGTCATTCAGGATACGGTTGGTCCGTATGAGGAAATTGTCACGCAAAGGGCAGGTCCCTACCT GCGTTTCAGCCACCGTGATTACAATAAGGGAACATCCCTTTCCTTTGTTGCCTCCCGGTTCGGCATTCCGTCTTCCCATG TCGCCATTTTCGGCGACGGGCACAATGATCTGGACGCCATGCGGCACTTGCCGGAGGCATTCCGGTGCTGCCCTTCCAAT GCGGCGCAGGAAGTGAAAGACATGGTTGCCCGCGGCCATGGATACATTAGCCCGGAACCGCGCACCCGGGGCGTTCTGGA CGGCCTGGCACATGGAGTGTTCCCTTATTTCGGGATGAAGGCGGAGGTTTTGAAGGAGGATATTTGA
Upstream 100 bases:
>100_bases CGGCAGAGCCGGTAGAGGATGACATCCCGCTGGCTGAACCCGTCGTGTGTGCGGGGAGCCGCGCCGTAGTGAAGGGAGGT GCCGGATTGAGATGGAATTG
Downstream 100 bases:
>100_bases AAACGGAGCTTTCGGATGCTGACGGGAGATCGGCTTTCAACATGTTTCTTTCATCAAGGCGCTCCCGGAAGGGGAAGAAT CGTATTGACAAGGAATGCCT
Product: sucrose-6F-phosphate phosphohydrolase
Products: NA
Alternate protein names: HAD Superfamily Hydrolase
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MRVLPVRALPKPERLRYLFSFDFDDTLFTLGGPAEERSIFFRTMRMLRSQYGVLWGVNTGRDPVYLREGLADMFRDDAEA FAPDFTVTMERNVHLADAEGRLMPGAAWNDDCAVAHDSLFTRYGGMLESLMGQLESRFSGLGLRRQDNDAFSLVVDDACG LDEVSCVIQDTVGPYEEIVTQRAGPYLRFSHRDYNKGTSLSFVASRFGIPSSHVAIFGDGHNDLDAMRHLPEAFRCCPSN AAQEVKDMVARGHGYISPEPRTRGVLDGLAHGVFPYFGMKAEVLKEDI
Sequences:
>Translated_288_residues MRVLPVRALPKPERLRYLFSFDFDDTLFTLGGPAEERSIFFRTMRMLRSQYGVLWGVNTGRDPVYLREGLADMFRDDAEA FAPDFTVTMERNVHLADAEGRLMPGAAWNDDCAVAHDSLFTRYGGMLESLMGQLESRFSGLGLRRQDNDAFSLVVDDACG LDEVSCVIQDTVGPYEEIVTQRAGPYLRFSHRDYNKGTSLSFVASRFGIPSSHVAIFGDGHNDLDAMRHLPEAFRCCPSN AAQEVKDMVARGHGYISPEPRTRGVLDGLAHGVFPYFGMKAEVLKEDI >Mature_288_residues MRVLPVRALPKPERLRYLFSFDFDDTLFTLGGPAEERSIFFRTMRMLRSQYGVLWGVNTGRDPVYLREGLADMFRDDAEA FAPDFTVTMERNVHLADAEGRLMPGAAWNDDCAVAHDSLFTRYGGMLESLMGQLESRFSGLGLRRQDNDAFSLVVDDACG LDEVSCVIQDTVGPYEEIVTQRAGPYLRFSHRDYNKGTSLSFVASRFGIPSSHVAIFGDGHNDLDAMRHLPEAFRCCPSN AAQEVKDMVARGHGYISPEPRTRGVLDGLAHGVFPYFGMKAEVLKEDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32221; Mature: 32221
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLPVRALPKPERLRYLFSFDFDDTLFTLGGPAEERSIFFRTMRMLRSQYGVLWGVNTG CCCCCCCCCCCHHHEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHCCEEEECCCC RDPVYLREGLADMFRDDAEAFAPDFTVTMERNVHLADAEGRLMPGAAWNDDCAVAHDSLF CCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCCCCCCCCCCCCHHHHHHHH TRYGGMLESLMGQLESRFSGLGLRRQDNDAFSLVVDDACGLDEVSCVIQDTVGPYEEIVT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHH QRAGPYLRFSHRDYNKGTSLSFVASRFGIPSSHVAIFGDGHNDLDAMRHLPEAFRCCPSN HCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCH AAQEVKDMVARGHGYISPEPRTRGVLDGLAHGVFPYFGMKAEVLKEDI HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure MRVLPVRALPKPERLRYLFSFDFDDTLFTLGGPAEERSIFFRTMRMLRSQYGVLWGVNTG CCCCCCCCCCCHHHEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHCCEEEECCCC RDPVYLREGLADMFRDDAEAFAPDFTVTMERNVHLADAEGRLMPGAAWNDDCAVAHDSLF CCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCCCCCCCCCCCCHHHHHHHH TRYGGMLESLMGQLESRFSGLGLRRQDNDAFSLVVDDACGLDEVSCVIQDTVGPYEEIVT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHH QRAGPYLRFSHRDYNKGTSLSFVASRFGIPSSHVAIFGDGHNDLDAMRHLPEAFRCCPSN HCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCH AAQEVKDMVARGHGYISPEPRTRGVLDGLAHGVFPYFGMKAEVLKEDI HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA