Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735970
Identifier: 187735970
GI number: 187735970
Start: 1769423
End: 1769833
Strand: Reverse
Name: 187735970
Synonym: Amuc_1479
Alternate gene names: NA
Gene position: 1769833-1769423 (Counterclockwise)
Preceding gene: 187735973
Following gene: 187735969
Centisome position: 66.43
GC content: 59.85
Gene sequence:
>411_bases ATGACCAGGATTCAGCTTTTTTACAGCCGGGCCTACCCAGGAAACGCCCTGCGTGCCAATACCCTCCAGGCATTGGCCCA TCTGGGCGTCAATCCGGAGGTGCAGGCTGAAGAGACTGTTCCGGAACAAATTGGGACGCCGCTTCCCGCACTCGCCATTG ACGGGGAAATCGTCGTCTACGGTGTGGAGCCTTCCGTGCGCGAGCTGGAACTCCTTCTCCAAGACCGAGTACAGAAGCGG GAGGCGGATTTTCCCTGCGGCGCGTGCGGCATGGGATGCAGCGGCATGAACGGCCCGGAAAACTGCCCCATGTGCATCCA GGACGGGAAAGACGGCAGCATGGCGGGCAGAATCATCGGCTTTGCCATCCTGCTCATGCTCCTGTTCCTCGCGATGAAAA TCCTGTCCTGA
Upstream 100 bases:
>100_bases ATGTCATGACACGGAAAAACGCATTGACCTTTGGAGCCCCGTCCTATTTGTTGGAAGAAGAGTCTTCCCAAACGGAAGCG TTCCTGACATACCCAGTTCC
Downstream 100 bases:
>100_bases ACTGTCCCGGATCTTCTCATGCCGAGCTGCCTCTTTTTACTTACCCTTCTTTCCTCTTCCAGGAAATGAAGATACACGGC AGTTAACGGCGTTTGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MTRIQLFYSRAYPGNALRANTLQALAHLGVNPEVQAEETVPEQIGTPLPALAIDGEIVVYGVEPSVRELELLLQDRVQKR EADFPCGACGMGCSGMNGPENCPMCIQDGKDGSMAGRIIGFAILLMLLFLAMKILS
Sequences:
>Translated_136_residues MTRIQLFYSRAYPGNALRANTLQALAHLGVNPEVQAEETVPEQIGTPLPALAIDGEIVVYGVEPSVRELELLLQDRVQKR EADFPCGACGMGCSGMNGPENCPMCIQDGKDGSMAGRIIGFAILLMLLFLAMKILS >Mature_135_residues TRIQLFYSRAYPGNALRANTLQALAHLGVNPEVQAEETVPEQIGTPLPALAIDGEIVVYGVEPSVRELELLLQDRVQKRE ADFPCGACGMGCSGMNGPENCPMCIQDGKDGSMAGRIIGFAILLMLLFLAMKILS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14651; Mature: 14520
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIQLFYSRAYPGNALRANTLQALAHLGVNPEVQAEETVPEQIGTPLPALAIDGEIVVY CCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHCCHHHHCCCCCEEEECCEEEEE GVEPSVRELELLLQDRVQKREADFPCGACGMGCSGMNGPENCPMCIQDGKDGSMAGRIIG ECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHH FAILLMLLFLAMKILS HHHHHHHHHHHHHHCC >Mature Secondary Structure TRIQLFYSRAYPGNALRANTLQALAHLGVNPEVQAEETVPEQIGTPLPALAIDGEIVVY CEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHCCHHHHCCCCCEEEECCEEEEE GVEPSVRELELLLQDRVQKREADFPCGACGMGCSGMNGPENCPMCIQDGKDGSMAGRIIG ECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHH FAILLMLLFLAMKILS HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA