Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735969
Identifier: 187735969
GI number: 187735969
Start: 1769002
End: 1769262
Strand: Reverse
Name: 187735969
Synonym: Amuc_1478
Alternate gene names: NA
Gene position: 1769262-1769002 (Counterclockwise)
Preceding gene: 187735970
Following gene: 187735968
Centisome position: 66.41
GC content: 56.32
Gene sequence:
>261_bases ATGCGCTCCTTCTTCGGTTCCATTCTCCTGATTCTGGTGCTGGCAGCCCTCGGCGCCACCATTTATTACCATTGGTCCAC CAACTCCCACCTGGAATTCGAACTCCGCAACCCCGACGAACCGGAAAAAACGACACAGGTCATCAACATGGAAAAACGGG CGGCAGCCCTGCAGGCTGTTCCGGCAGAAAAAACTCCTGTTTCCCCCGCGGAAGAAATTCCCGCTTCCCCTGCCGGAATG CCGGAACCCGCGGAATTGTAA
Upstream 100 bases:
>100_bases AGGAAATGAAGATACACGGCAGTTAACGGCGTTTGCCCGCCCACGCAGGCGGTCTTGATAATTTCTTGAATTCCCCCCTC CTCCGGGACACAGTAGAGGC
Downstream 100 bases:
>100_bases TCCCTCCTGTTGCCGCACTATGAAACCGGTCATTGGATACACGCTGGGCGACCAGTCGGGCATAGGCCCGGAAGTCATCT CCGCCGCGCTTGCCTCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MRSFFGSILLILVLAALGATIYYHWSTNSHLEFELRNPDEPEKTTQVINMEKRAAALQAVPAEKTPVSPAEEIPASPAGM PEPAEL
Sequences:
>Translated_86_residues MRSFFGSILLILVLAALGATIYYHWSTNSHLEFELRNPDEPEKTTQVINMEKRAAALQAVPAEKTPVSPAEEIPASPAGM PEPAEL >Mature_86_residues MRSFFGSILLILVLAALGATIYYHWSTNSHLEFELRNPDEPEKTTQVINMEKRAAALQAVPAEKTPVSPAEEIPASPAGM PEPAEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9405; Mature: 9405
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSFFGSILLILVLAALGATIYYHWSTNSHLEFELRNPDEPEKTTQVINMEKRAAALQAV CCHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC PAEKTPVSPAEEIPASPAGMPEPAEL CCCCCCCCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure MRSFFGSILLILVLAALGATIYYHWSTNSHLEFELRNPDEPEKTTQVINMEKRAAALQAV CCHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC PAEKTPVSPAEEIPASPAGMPEPAEL CCCCCCCCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA