Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is hisH [H]
Identifier: 187735966
GI number: 187735966
Start: 1766333
End: 1766941
Strand: Direct
Name: hisH [H]
Synonym: Amuc_1475
Alternate gene names: 187735966
Gene position: 1766333-1766941 (Clockwise)
Preceding gene: 187735965
Following gene: 187735971
Centisome position: 66.3
GC content: 57.31
Gene sequence:
>609_bases ATGAAACTTGGCGTGATTGATTACGGTGCGGGCAATCTCCGCAGTGTGCTGAACACCTTTGAGGCCGCCGGCGTGACCGG TCATCTGGTGCGTACTCCGGAAGATGCGGCGGGCGTAACCCATTTGGTTCTTCCCGGCGTGGGCGCCTTCGGCGACTGTG CAGAAAAGCTGCGCCGCCAGAATCTGGTGCCCCTGGTCCGGGCATGGATAGAGCGGGACAGGCCTTTTCTGGGTATCTGC GTGGGCTATCAGGTTCTTTTTGAAAGCGGGGAAGAAAGCGGGCAGGTTCCCGGACTGGGCATCCTCAAGGGGCGCGTGGT TCGATTTTCAGAATCGGAACTCAAGGTGCCTCACATGGGGTGGAACAGCGTGGCTCTCACTGATCCCGCCGATCCCATCT GGAAAGGCATGGGGAAGGAACCGTACTTTTATTTCGTGCATTCCTATTATCCCCAGCCGGAGGATGAATCCCTGATTGCC GCTTTCTGCACCTACGGCGTGCGTTTTGCTGCCGCTGTCAGGCACGGCAATCTGGTCGCCACCCAGTTCCACCCGGAAAA AAGCCAGAAACTGGGCGTGAAACTGCTGAAAAACTTTATTTCCCTGTGA
Upstream 100 bases:
>100_bases CTGTCTTCAAGGGCATCGCCCACGCGTTGCGGCAGGCTGCGGCGATTGATCCCCGAGCCGCCGGGACGCTGCCTTCAACC AAGGGAATGCTGTAAAATAC
Downstream 100 bases:
>100_bases GCCGGAAATTACCGGCTCACAGACTGCCGCTCTTTTTCCTGACAGCAAGGGGCAAGGAGGAGCGGTGAATCAAATGAAAC GTCATTCTCGAAAAGCAGCC
Product: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKLGVIDYGAGNLRSVLNTFEAAGVTGHLVRTPEDAAGVTHLVLPGVGAFGDCAEKLRRQNLVPLVRAWIERDRPFLGIC VGYQVLFESGEESGQVPGLGILKGRVVRFSESELKVPHMGWNSVALTDPADPIWKGMGKEPYFYFVHSYYPQPEDESLIA AFCTYGVRFAAAVRHGNLVATQFHPEKSQKLGVKLLKNFISL
Sequences:
>Translated_202_residues MKLGVIDYGAGNLRSVLNTFEAAGVTGHLVRTPEDAAGVTHLVLPGVGAFGDCAEKLRRQNLVPLVRAWIERDRPFLGIC VGYQVLFESGEESGQVPGLGILKGRVVRFSESELKVPHMGWNSVALTDPADPIWKGMGKEPYFYFVHSYYPQPEDESLIA AFCTYGVRFAAAVRHGNLVATQFHPEKSQKLGVKLLKNFISL >Mature_202_residues MKLGVIDYGAGNLRSVLNTFEAAGVTGHLVRTPEDAAGVTHLVLPGVGAFGDCAEKLRRQNLVPLVRAWIERDRPFLGIC VGYQVLFESGEESGQVPGLGILKGRVVRFSESELKVPHMGWNSVALTDPADPIWKGMGKEPYFYFVHSYYPQPEDESLIA AFCTYGVRFAAAVRHGNLVATQFHPEKSQKLGVKLLKNFISL
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=202, Percent_Identity=38.1188118811881, Blast_Score=128, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6319725, Length=207, Percent_Identity=37.6811594202899, Blast_Score=136, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 22188; Mature: 22188
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLGVIDYGAGNLRSVLNTFEAAGVTGHLVRTPEDAAGVTHLVLPGVGAFGDCAEKLRRQ CCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCHHHCCEEEECCCCCCHHHHHHHHHHC NLVPLVRAWIERDRPFLGICVGYQVLFESGEESGQVPGLGILKGRVVRFSESELKVPHMG CCHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCCEEEECCEEEEECCCCCCCCCCC WNSVALTDPADPIWKGMGKEPYFYFVHSYYPQPEDESLIAAFCTYGVRFAAAVRHGNLVA CCCEEECCCCCHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE TQFHPEKSQKLGVKLLKNFISL EEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLGVIDYGAGNLRSVLNTFEAAGVTGHLVRTPEDAAGVTHLVLPGVGAFGDCAEKLRRQ CCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCHHHCCEEEECCCCCCHHHHHHHHHHC NLVPLVRAWIERDRPFLGICVGYQVLFESGEESGQVPGLGILKGRVVRFSESELKVPHMG CCHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCCEEEECCEEEEECCCCCCCCCCC WNSVALTDPADPIWKGMGKEPYFYFVHSYYPQPEDESLIAAFCTYGVRFAAAVRHGNLVA CCCEEECCCCCHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE TQFHPEKSQKLGVKLLKNFISL EEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA