Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is hisB
Identifier: 187735965
GI number: 187735965
Start: 1765737
End: 1766327
Strand: Direct
Name: hisB
Synonym: Amuc_1474
Alternate gene names: 187735965
Gene position: 1765737-1766327 (Clockwise)
Preceding gene: 187735964
Following gene: 187735966
Centisome position: 66.28
GC content: 57.87
Gene sequence:
>591_bases ATGAGGAACGCTTCTTGCAAACGGGTCACGGGTGAAACGGACATCAGCATGGAACTGAACCTGGACGGCACGGGATGCGC CGCCGTCGCAACGGGGCATGCGTTTTTTGACCATATGCTGGATTTACTGGCCCGCCATTCCCTGATGGACCTGACCCTTC AGGCCCGCGGAGACCTGGAAGTAGACGCCCACCACACGGTGGAGGATGTGGGAATCGTTCTGGGGGAATGCATTAAAAAT GCACTGGGGGACAAAAAGGGCATTGTTCGCTACGGCTGTTCCTACCTGCCCATGGATGAAACTCTTACGCGCGTGGTGAT GGATTTGAGCAACCGTCCGTATGTAGCTTTCCGTATTCCGGAAGGCGGTCTGCCGGATGCCCCCAACTTTCCGCTGACCC TTTGCGAGGAATTCTGCCGTGCGCTGGCCAATAACCTGCGTTGCAACCTGCATGTGGAAGTGCTTTACGGCAGGGATGGC CACCACATTGCGGAATCTGTCTTCAAGGGCATCGCCCACGCGTTGCGGCAGGCTGCGGCGATTGATCCCCGAGCCGCCGG GACGCTGCCTTCAACCAAGGGAATGCTGTAA
Upstream 100 bases:
>100_bases TTTGACGGTCTGCATGTTTTTGCGGGGAGAAGAGGGCAAATCTTTCCCCATGCGATATTTCCTGCTTTCTTCCGCCGCGT CTTCAGTATAGAAGTGTTGC
Downstream 100 bases:
>100_bases AATACATGAAACTTGGCGTGATTGATTACGGTGCGGGCAATCTCCGCAGTGTGCTGAACACCTTTGAGGCCGCCGGCGTG ACCGGTCATCTGGTGCGTAC
Product: Imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MRNASCKRVTGETDISMELNLDGTGCAAVATGHAFFDHMLDLLARHSLMDLTLQARGDLEVDAHHTVEDVGIVLGECIKN ALGDKKGIVRYGCSYLPMDETLTRVVMDLSNRPYVAFRIPEGGLPDAPNFPLTLCEEFCRALANNLRCNLHVEVLYGRDG HHIAESVFKGIAHALRQAAAIDPRAAGTLPSTKGML
Sequences:
>Translated_196_residues MRNASCKRVTGETDISMELNLDGTGCAAVATGHAFFDHMLDLLARHSLMDLTLQARGDLEVDAHHTVEDVGIVLGECIKN ALGDKKGIVRYGCSYLPMDETLTRVVMDLSNRPYVAFRIPEGGLPDAPNFPLTLCEEFCRALANNLRCNLHVEVLYGRDG HHIAESVFKGIAHALRQAAAIDPRAAGTLPSTKGML >Mature_196_residues MRNASCKRVTGETDISMELNLDGTGCAAVATGHAFFDHMLDLLARHSLMDLTLQARGDLEVDAHHTVEDVGIVLGECIKN ALGDKKGIVRYGCSYLPMDETLTRVVMDLSNRPYVAFRIPEGGLPDAPNFPLTLCEEFCRALANNLRCNLHVEVLYGRDG HHIAESVFKGIAHALRQAAAIDPRAAGTLPSTKGML
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=195, Percent_Identity=41.5384615384615, Blast_Score=147, Evalue=5e-37, Organism=Saccharomyces cerevisiae, GI6324776, Length=222, Percent_Identity=39.6396396396396, Blast_Score=140, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_AKKM8 (B2UL23)
Other databases:
- EMBL: CP001071 - RefSeq: YP_001878077.1 - ProteinModelPortal: B2UL23 - SMR: B2UL23 - GeneID: 6274464 - GenomeReviews: CP001071_GR - KEGG: amu:Amuc_1474 - HOGENOM: HBG289010 - OMA: TLHVETL - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 21300; Mature: 21300
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNASCKRVTGETDISMELNLDGTGCAAVATGHAFFDHMLDLLARHSLMDLTLQARGDLE CCCCCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEE VDAHHTVEDVGIVLGECIKNALGDKKGIVRYGCSYLPMDETLTRVVMDLSNRPYVAFRIP ECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECC EGGLPDAPNFPLTLCEEFCRALANNLRCNLHVEVLYGRDGHHIAESVFKGIAHALRQAAA CCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHC IDPRAAGTLPSTKGML CCCCCCCCCCCCCCCC >Mature Secondary Structure MRNASCKRVTGETDISMELNLDGTGCAAVATGHAFFDHMLDLLARHSLMDLTLQARGDLE CCCCCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEE VDAHHTVEDVGIVLGECIKNALGDKKGIVRYGCSYLPMDETLTRVVMDLSNRPYVAFRIP ECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECC EGGLPDAPNFPLTLCEEFCRALANNLRCNLHVEVLYGRDGHHIAESVFKGIAHALRQAAA CCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHC IDPRAAGTLPSTKGML CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA