Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is yggU [C]

Identifier: 187735949

GI number: 187735949

Start: 1749783

End: 1750073

Strand: Direct

Name: yggU [C]

Synonym: Amuc_1458

Alternate gene names: 187735949

Gene position: 1749783-1750073 (Clockwise)

Preceding gene: 187735948

Following gene: 187735950

Centisome position: 65.68

GC content: 60.48

Gene sequence:

>291_bases
ATGAAACTGGCTCTGAAAGTTATTCCCAATGCGAAGAAGAGCGAGGCCGTGGGATGGGAGGAAGATCCCCGTGCCGGCCG
CGCGCTGAAGCTGCGCATTGCCGCGCCTCCCGTGGAGGGAAAGGCGAACAAGGCCGTCGTCCTTTTCCTGTCCGCTTGGC
TGGATATTCCCCGTTCCTCCATCAGCTTTCTGCGCGGGGAATCCTCCCGGCTGAAAGTGGTGGAATTGCCGGACGGATGC
GAGGGAAAACTTGCCCGGCTGCTTTCTGCGGAGGATGTTTCCGGCGCTTAG

Upstream 100 bases:

>100_bases
ATGCCACGGTGGGGAGCGCTTTGGATTTGTTTGGCGGCGGTTTAATCAGGTACGGGGATCTGGTGGCCAGGCAGCGCGGG
AAGTCCGGCATGGAAACGGT

Downstream 100 bases:

>100_bases
GAAAGCCGGGCGGAAGGCAGGCATTTTCTTTATGCGTAGAAGGGTTGCATCAGGCGCGGTCCATTACGCGTCAAACGTCA
TCCATGTCTTAGCAGGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MKLALKVIPNAKKSEAVGWEEDPRAGRALKLRIAAPPVEGKANKAVVLFLSAWLDIPRSSISFLRGESSRLKVVELPDGC
EGKLARLLSAEDVSGA

Sequences:

>Translated_96_residues
MKLALKVIPNAKKSEAVGWEEDPRAGRALKLRIAAPPVEGKANKAVVLFLSAWLDIPRSSISFLRGESSRLKVVELPDGC
EGKLARLLSAEDVSGA
>Mature_96_residues
MKLALKVIPNAKKSEAVGWEEDPRAGRALKLRIAAPPVEGKANKAVVLFLSAWLDIPRSSISFLRGESSRLKVVELPDGC
EGKLARLLSAEDVSGA

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005228
- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 10294; Mature: 10294

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLALKVIPNAKKSEAVGWEEDPRAGRALKLRIAAPPVEGKANKAVVLFLSAWLDIPRSS
CCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEHHHCCCCCH
ISFLRGESSRLKVVELPDGCEGKLARLLSAEDVSGA
HHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKLALKVIPNAKKSEAVGWEEDPRAGRALKLRIAAPPVEGKANKAVVLFLSAWLDIPRSS
CCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEHHHCCCCCH
ISFLRGESSRLKVVELPDGCEGKLARLLSAEDVSGA
HHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA