Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735944
Identifier: 187735944
GI number: 187735944
Start: 1745850
End: 1746488
Strand: Reverse
Name: 187735944
Synonym: Amuc_1453
Alternate gene names: NA
Gene position: 1746488-1745850 (Counterclockwise)
Preceding gene: 187735945
Following gene: 187735943
Centisome position: 65.56
GC content: 61.5
Gene sequence:
>639_bases ATGAACCCCACCTTCCATCCCGTCCCCCGGATCAGCACCGCGCCCTCCGGGAAAATCAGCCACCCCTCCCCGGCACCGCC CTGGACACTCCCCCCAACTGCGGAAAGCAGCCCGGCGCCTGCCCGGGAGGTGGAATGCTTCTCCTGCCGCAAAAGCACCT CCGTCCCCGCCACGGCAGTTTCCGCCAGGTGCGGCCATTGCTCCGCGTATATCAAACTGGACGACGTCATTTTACACAGC AGAACGCACCGGACCAAGGTGCAGACCTGCGGAAGCGTTACCGTGCAGGCCAATGCAGACCTGAAGGGGCTGAACATCGA ATGCCGTGACCTGGTCTTATACGGCAGGGCTTCCGGCGACTTCCTGTGCCGCGGCGTCTGCAAAATCAAAACGGACCAGC ACATCTCCGGCTCCATCTGCGCCCGCAGGATGGTGGTGGAAAAAAAGACGACGGTGCTGGTCACAGGAACCATCCGCGTG GAAAACATCTGGATACAGGGTTCTCTGGAAGGAACGCTTACGGCGGATGAAACCGTCACCATCCACCGGCACGCCAAATT CCTGGGAGATATCACGGCGCGCCGCCTCATCATTGAGGAAGGCGGCACGCACCAGGGAGCCTTTACCCGCCTTACGTGA
Upstream 100 bases:
>100_bases CAGAGCACGCTGGATATTGACGCGGAATAAAAAACTCTCCGCCTGCTACTTTCAGGGGCGGCAAAAGAACGGACCGTTCT TTTGCCGCCCTCTTTGTTCC
Downstream 100 bases:
>100_bases CATGAATCTTCCCATCTCCATCCGCGGCGCGCGCCAGCACAACCTCCGGAACCTGAATCTGGATCTTCCGTCCAACAAGC TCATCGTATTCTGCGGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MNPTFHPVPRISTAPSGKISHPSPAPPWTLPPTAESSPAPAREVECFSCRKSTSVPATAVSARCGHCSAYIKLDDVILHS RTHRTKVQTCGSVTVQANADLKGLNIECRDLVLYGRASGDFLCRGVCKIKTDQHISGSICARRMVVEKKTTVLVTGTIRV ENIWIQGSLEGTLTADETVTIHRHAKFLGDITARRLIIEEGGTHQGAFTRLT
Sequences:
>Translated_212_residues MNPTFHPVPRISTAPSGKISHPSPAPPWTLPPTAESSPAPAREVECFSCRKSTSVPATAVSARCGHCSAYIKLDDVILHS RTHRTKVQTCGSVTVQANADLKGLNIECRDLVLYGRASGDFLCRGVCKIKTDQHISGSICARRMVVEKKTTVLVTGTIRV ENIWIQGSLEGTLTADETVTIHRHAKFLGDITARRLIIEEGGTHQGAFTRLT >Mature_212_residues MNPTFHPVPRISTAPSGKISHPSPAPPWTLPPTAESSPAPAREVECFSCRKSTSVPATAVSARCGHCSAYIKLDDVILHS RTHRTKVQTCGSVTVQANADLKGLNIECRDLVLYGRASGDFLCRGVCKIKTDQHISGSICARRMVVEKKTTVLVTGTIRV ENIWIQGSLEGTLTADETVTIHRHAKFLGDITARRLIIEEGGTHQGAFTRLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22968; Mature: 22968
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPTFHPVPRISTAPSGKISHPSPAPPWTLPPTAESSPAPAREVECFSCRKSTSVPATAV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEE SARCGHCSAYIKLDDVILHSRTHRTKVQTCGSVTVQANADLKGLNIECRDLVLYGRASGD ECCCCCEEEEEEEEEEEEECCCCCCEEEECCEEEEEECCCEEECCEEEEEEEEEECCCCC FLCRGVCKIKTDQHISGSICARRMVVEKKTTVLVTGTIRVENIWIQGSLEGTLTADETVT EEEEEEEEECCCCCCCHHHHHHHHEEECCEEEEEEEEEEEEEEEEEECCCEEEECCCEEE IHRHAKFLGDITARRLIIEEGGTHQGAFTRLT EEHHHHHHHHHHHEEEEEECCCCCCCEEEECC >Mature Secondary Structure MNPTFHPVPRISTAPSGKISHPSPAPPWTLPPTAESSPAPAREVECFSCRKSTSVPATAV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEE SARCGHCSAYIKLDDVILHSRTHRTKVQTCGSVTVQANADLKGLNIECRDLVLYGRASGD ECCCCCEEEEEEEEEEEEECCCCCCEEEECCEEEEEECCCEEECCEEEEEEEEEECCCCC FLCRGVCKIKTDQHISGSICARRMVVEKKTTVLVTGTIRVENIWIQGSLEGTLTADETVT EEEEEEEEECCCCCCCHHHHHHHHEEECCEEEEEEEEEEEEEEEEEECCCEEEECCCEEE IHRHAKFLGDITARRLIIEEGGTHQGAFTRLT EEHHHHHHHHHHHEEEEEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA