Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735944

Identifier: 187735944

GI number: 187735944

Start: 1745850

End: 1746488

Strand: Reverse

Name: 187735944

Synonym: Amuc_1453

Alternate gene names: NA

Gene position: 1746488-1745850 (Counterclockwise)

Preceding gene: 187735945

Following gene: 187735943

Centisome position: 65.56

GC content: 61.5

Gene sequence:

>639_bases
ATGAACCCCACCTTCCATCCCGTCCCCCGGATCAGCACCGCGCCCTCCGGGAAAATCAGCCACCCCTCCCCGGCACCGCC
CTGGACACTCCCCCCAACTGCGGAAAGCAGCCCGGCGCCTGCCCGGGAGGTGGAATGCTTCTCCTGCCGCAAAAGCACCT
CCGTCCCCGCCACGGCAGTTTCCGCCAGGTGCGGCCATTGCTCCGCGTATATCAAACTGGACGACGTCATTTTACACAGC
AGAACGCACCGGACCAAGGTGCAGACCTGCGGAAGCGTTACCGTGCAGGCCAATGCAGACCTGAAGGGGCTGAACATCGA
ATGCCGTGACCTGGTCTTATACGGCAGGGCTTCCGGCGACTTCCTGTGCCGCGGCGTCTGCAAAATCAAAACGGACCAGC
ACATCTCCGGCTCCATCTGCGCCCGCAGGATGGTGGTGGAAAAAAAGACGACGGTGCTGGTCACAGGAACCATCCGCGTG
GAAAACATCTGGATACAGGGTTCTCTGGAAGGAACGCTTACGGCGGATGAAACCGTCACCATCCACCGGCACGCCAAATT
CCTGGGAGATATCACGGCGCGCCGCCTCATCATTGAGGAAGGCGGCACGCACCAGGGAGCCTTTACCCGCCTTACGTGA

Upstream 100 bases:

>100_bases
CAGAGCACGCTGGATATTGACGCGGAATAAAAAACTCTCCGCCTGCTACTTTCAGGGGCGGCAAAAGAACGGACCGTTCT
TTTGCCGCCCTCTTTGTTCC

Downstream 100 bases:

>100_bases
CATGAATCTTCCCATCTCCATCCGCGGCGCGCGCCAGCACAACCTCCGGAACCTGAATCTGGATCTTCCGTCCAACAAGC
TCATCGTATTCTGCGGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNPTFHPVPRISTAPSGKISHPSPAPPWTLPPTAESSPAPAREVECFSCRKSTSVPATAVSARCGHCSAYIKLDDVILHS
RTHRTKVQTCGSVTVQANADLKGLNIECRDLVLYGRASGDFLCRGVCKIKTDQHISGSICARRMVVEKKTTVLVTGTIRV
ENIWIQGSLEGTLTADETVTIHRHAKFLGDITARRLIIEEGGTHQGAFTRLT

Sequences:

>Translated_212_residues
MNPTFHPVPRISTAPSGKISHPSPAPPWTLPPTAESSPAPAREVECFSCRKSTSVPATAVSARCGHCSAYIKLDDVILHS
RTHRTKVQTCGSVTVQANADLKGLNIECRDLVLYGRASGDFLCRGVCKIKTDQHISGSICARRMVVEKKTTVLVTGTIRV
ENIWIQGSLEGTLTADETVTIHRHAKFLGDITARRLIIEEGGTHQGAFTRLT
>Mature_212_residues
MNPTFHPVPRISTAPSGKISHPSPAPPWTLPPTAESSPAPAREVECFSCRKSTSVPATAVSARCGHCSAYIKLDDVILHS
RTHRTKVQTCGSVTVQANADLKGLNIECRDLVLYGRASGDFLCRGVCKIKTDQHISGSICARRMVVEKKTTVLVTGTIRV
ENIWIQGSLEGTLTADETVTIHRHAKFLGDITARRLIIEEGGTHQGAFTRLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22968; Mature: 22968

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTFHPVPRISTAPSGKISHPSPAPPWTLPPTAESSPAPAREVECFSCRKSTSVPATAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEE
SARCGHCSAYIKLDDVILHSRTHRTKVQTCGSVTVQANADLKGLNIECRDLVLYGRASGD
ECCCCCEEEEEEEEEEEEECCCCCCEEEECCEEEEEECCCEEECCEEEEEEEEEECCCCC
FLCRGVCKIKTDQHISGSICARRMVVEKKTTVLVTGTIRVENIWIQGSLEGTLTADETVT
EEEEEEEEECCCCCCCHHHHHHHHEEECCEEEEEEEEEEEEEEEEEECCCEEEECCCEEE
IHRHAKFLGDITARRLIIEEGGTHQGAFTRLT
EEHHHHHHHHHHHEEEEEECCCCCCCEEEECC
>Mature Secondary Structure
MNPTFHPVPRISTAPSGKISHPSPAPPWTLPPTAESSPAPAREVECFSCRKSTSVPATAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEE
SARCGHCSAYIKLDDVILHSRTHRTKVQTCGSVTVQANADLKGLNIECRDLVLYGRASGD
ECCCCCEEEEEEEEEEEEECCCCCCEEEECCEEEEEECCCEEECCEEEEEEEEEECCCCC
FLCRGVCKIKTDQHISGSICARRMVVEKKTTVLVTGTIRVENIWIQGSLEGTLTADETVT
EEEEEEEEECCCCCCCHHHHHHHHEEECCEEEEEEEEEEEEEEEEEECCCEEEECCCEEE
IHRHAKFLGDITARRLIIEEGGTHQGAFTRLT
EEHHHHHHHHHHHEEEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA