Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735945

Identifier: 187735945

GI number: 187735945

Start: 1746559

End: 1747146

Strand: Reverse

Name: 187735945

Synonym: Amuc_1454

Alternate gene names: NA

Gene position: 1747146-1746559 (Counterclockwise)

Preceding gene: 187735947

Following gene: 187735944

Centisome position: 65.58

GC content: 58.67

Gene sequence:

>588_bases
ATGTTTGGATCATTCACTACCGTTCCCGCCCCCAAGGGCAATAAAAATCCTGAATCCACCCCCAGCTGGATGGATGTAGC
CAAGAGCCAGGACATCCCCGAACCGGTTGCGGAAGCCGCGCCTTCCTACGCCCCCACCACCCGTGTCCAGCAGCTGACCC
GCAATGTGCTGAACTCCGATGTGGAGGTAATCGGTTCCCTGCGTTTTTCCGATGACCTGCTGATTGACGGCACCGTGGAA
GGCGACATTTCCTCCGAAGGGGTGCTTTCCGTAGGACAGAACGCCGTCATCCGGGCGGAAATCAATACCAAATCCGTTAT
CATCCACGGCAAGGTCATCGGCAATGTAACAGTCACGGACCGCGTGGAACTAAAAAGCACGGCAGAACTCGTAGGTGACA
TCCAGGCCGCCTCCCTGGCTATTGAAGGCGGTGCAATCTTCATCGGCCATTCTACCGTAGGCGCCCCCACGGTAGGAGCC
ACAGGGGCTTCCGCCGCCAAGAAGGCGGCTTCCGTCCATGCCTTCGCTCCGGAGCCGGAAACCCATGCTCCGGCCAGCCA
GAGCACGCTGGATATTGACGCGGAATAA

Upstream 100 bases:

>100_bases
CCGGAGAAAATTGTTTCACATCCACATGCGGGTGATGTACATTAAACCGGACGAGTTTCAAGAGCTCCCATCTTACCTTT
CACCCCCTCTTTTTAACGCC

Downstream 100 bases:

>100_bases
AAAACTCTCCGCCTGCTACTTTCAGGGGCGGCAAAAGAACGGACCGTTCTTTTGCCGCCCTCTTTGTTCCATGAACCCCA
CCTTCCATCCCGTCCCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MFGSFTTVPAPKGNKNPESTPSWMDVAKSQDIPEPVAEAAPSYAPTTRVQQLTRNVLNSDVEVIGSLRFSDDLLIDGTVE
GDISSEGVLSVGQNAVIRAEINTKSVIIHGKVIGNVTVTDRVELKSTAELVGDIQAASLAIEGGAIFIGHSTVGAPTVGA
TGASAAKKAASVHAFAPEPETHAPASQSTLDIDAE

Sequences:

>Translated_195_residues
MFGSFTTVPAPKGNKNPESTPSWMDVAKSQDIPEPVAEAAPSYAPTTRVQQLTRNVLNSDVEVIGSLRFSDDLLIDGTVE
GDISSEGVLSVGQNAVIRAEINTKSVIIHGKVIGNVTVTDRVELKSTAELVGDIQAASLAIEGGAIFIGHSTVGAPTVGA
TGASAAKKAASVHAFAPEPETHAPASQSTLDIDAE
>Mature_195_residues
MFGSFTTVPAPKGNKNPESTPSWMDVAKSQDIPEPVAEAAPSYAPTTRVQQLTRNVLNSDVEVIGSLRFSDDLLIDGTVE
GDISSEGVLSVGQNAVIRAEINTKSVIIHGKVIGNVTVTDRVELKSTAELVGDIQAASLAIEGGAIFIGHSTVGAPTVGA
TGASAAKKAASVHAFAPEPETHAPASQSTLDIDAE

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20059; Mature: 20059

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGSFTTVPAPKGNKNPESTPSWMDVAKSQDIPEPVAEAAPSYAPTTRVQQLTRNVLNSD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCC
VEVIGSLRFSDDLLIDGTVEGDISSEGVLSVGQNAVIRAEINTKSVIIHGKVIGNVTVTD
HHEEEEEECCCCEEEECEECCCCCCCCEEECCCCEEEEEECCCCEEEEEEEEEECEEEEC
RVELKSTAELVGDIQAASLAIEGGAIFIGHSTVGAPTVGATGASAAKKAASVHAFAPEPE
CCCHHHHHHHHHCHHEHEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHEEEEECCCCC
THAPASQSTLDIDAE
CCCCCCCCEEEECCC
>Mature Secondary Structure
MFGSFTTVPAPKGNKNPESTPSWMDVAKSQDIPEPVAEAAPSYAPTTRVQQLTRNVLNSD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCC
VEVIGSLRFSDDLLIDGTVEGDISSEGVLSVGQNAVIRAEINTKSVIIHGKVIGNVTVTD
HHEEEEEECCCCEEEECEECCCCCCCCEEECCCCEEEEEECCCCEEEEEEEEEECEEEEC
RVELKSTAELVGDIQAASLAIEGGAIFIGHSTVGAPTVGATGASAAKKAASVHAFAPEPE
CCCHHHHHHHHHCHHEHEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHEEEEECCCCC
THAPASQSTLDIDAE
CCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA