Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735830
Identifier: 187735830
GI number: 187735830
Start: 1614054
End: 1614443
Strand: Direct
Name: 187735830
Synonym: Amuc_1337
Alternate gene names: NA
Gene position: 1614054-1614443 (Clockwise)
Preceding gene: 187735829
Following gene: 187735831
Centisome position: 60.59
GC content: 46.92
Gene sequence:
>390_bases ATGGCACTATTCAAGTCTGATCAAAATATCGTTGATGCGCTCAAACAAGAGCTTGCCCCTTTTGGGGCAGAAATGAAGAA TGGGATTAAAGAAATCCAATCCTCTATTAAAGATCTTTGTGAGCGTGTCGAAGCCCTGGAAAAGGAGAATGTCAAGCTCC ACGCATCCGTTGCCCTCAAGAAAAACCAGCTTGAGGAAGAAGCCGATACGAAGGCGAGCCAGAAGGCCGCTGAAATGGTG GCTGGTATGGGACATAAAGCCGTAGTGGATAAGCCGGAAGACGGCGAAGAAAACTCCTCTATCCTGGAGCAGTACTCAGC TCTTTCCGGAGAGGAACAGAGGAAGTTTTATGCTGCTCATAAGGATGAGTTGGCAAAACTTTGCAAGTAA
Upstream 100 bases:
>100_bases TGTGGCGGAAGATGCTGTTTCCCTGGGCCTGATTGATGATGTAATACCCTGGGTCGATTTTCCTGGAGTGGTATGAAAAC GCAACGGTTTTGTCATAAGT
Downstream 100 bases:
>100_bases TCAATAACAATATTAACGATTAAAACCATTTTTTAGAATTATGGCTCTTTCAGATGCTCACAAGATAGTTATTCACAGTG AAGTCATTTCTTCTTTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MALFKSDQNIVDALKQELAPFGAEMKNGIKEIQSSIKDLCERVEALEKENVKLHASVALKKNQLEEEADTKASQKAAEMV AGMGHKAVVDKPEDGEENSSILEQYSALSGEEQRKFYAAHKDELAKLCK
Sequences:
>Translated_129_residues MALFKSDQNIVDALKQELAPFGAEMKNGIKEIQSSIKDLCERVEALEKENVKLHASVALKKNQLEEEADTKASQKAAEMV AGMGHKAVVDKPEDGEENSSILEQYSALSGEEQRKFYAAHKDELAKLCK >Mature_128_residues ALFKSDQNIVDALKQELAPFGAEMKNGIKEIQSSIKDLCERVEALEKENVKLHASVALKKNQLEEEADTKASQKAAEMVA GMGHKAVVDKPEDGEENSSILEQYSALSGEEQRKFYAAHKDELAKLCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14264; Mature: 14133
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFKSDQNIVDALKQELAPFGAEMKNGIKEIQSSIKDLCERVEALEKENVKLHASVALK CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH KNQLEEEADTKASQKAAEMVAGMGHKAVVDKPEDGEENSSILEQYSALSGEEQRKFYAAH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH KDELAKLCK HHHHHHHCC >Mature Secondary Structure ALFKSDQNIVDALKQELAPFGAEMKNGIKEIQSSIKDLCERVEALEKENVKLHASVALK CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH KNQLEEEADTKASQKAAEMVAGMGHKAVVDKPEDGEENSSILEQYSALSGEEQRKFYAAH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH KDELAKLCK HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA