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The map label for this gene is sohB [C]

Identifier: 187735829

GI number: 187735829

Start: 1613286

End: 1614029

Strand: Direct

Name: sohB [C]

Synonym: Amuc_1336

Alternate gene names: 187735829

Gene position: 1613286-1614029 (Clockwise)

Preceding gene: 187735828

Following gene: 187735830

Centisome position: 60.56

GC content: 49.87

Gene sequence:

>744_bases
ATGAAACCGTTATATTGTGAAGAAACTGCATGGCTGGCGAAGATTCGCCAGCGGAAGAGCCTGGAACTGAAAGCCGCAGG
GAATCCGGATTTTGACTTCTCATTTTTCATCCAGACACGCCAAAAAGCGCGGGTAATTGGGTCATCCTTGGTGATTGACG
TGATTGGGCCTCTATACGGTGACGGCGTGCCGTTGAATGAAGTCCTGGGCGGCACGAATTATCAGTCCATCGTGAAGGAA
ATAAAGGGTGCTGCCGGGAACATTGATGAAGTTGTTTTCATTTTTGACTCTCCGGGAGGTGACGTGCAAGGCTGTCATGA
AACAGCAGAATTGATTAAATCTCTGCCAGTGGAAACAGTGGCTTATGTCAAAGGCATGTGCTGCTCTGCCGCCTATTATT
TGGCTTCCGCTTGTGATCAAGTGGTCGTGACGGAAACGGCGCTGGTTGGCAGTATCGGGACGGTCATCAGCCTGTGGAAT
GCCAAGAGTGAGGAAATATTGACCATCACGAATGATGATGCTGTTTTCAAGCATCCGGAAACCCCGATGAATACGGAGGC
AATCGCCTATTACAGGGATTTGTGCAACAAGATCGCCGGGCGGTTTCAGGAATTTGTGGCTTCAGGACGTCCCGGTTTAT
CTGCGGATGCGTTTTCCGGCAAGGTTTTTGTGGCGGAAGATGCTGTTTCCCTGGGCCTGATTGATGATGTAATACCCTGG
GTCGATTTTCCTGGAGTGGTATGA

Upstream 100 bases:

>100_bases
CGTGCCAGGGAAGCCGCCATTGCGGAGAAGTTGCGCCGTGAAGCTGAAGCAGAATTTGGAGTAGAAATCTCTCCGGATTA
TATCAGGAAGTTTTAATGTG

Downstream 100 bases:

>100_bases
AAACGCAACGGTTTTGTCATAAGTATGGCACTATTCAAGTCTGATCAAAATATCGTTGATGCGCTCAAACAAGAGCTTGC
CCCTTTTGGGGCAGAAATGA

Product: peptidase S49

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKPLYCEETAWLAKIRQRKSLELKAAGNPDFDFSFFIQTRQKARVIGSSLVIDVIGPLYGDGVPLNEVLGGTNYQSIVKE
IKGAAGNIDEVVFIFDSPGGDVQGCHETAELIKSLPVETVAYVKGMCCSAAYYLASACDQVVVTETALVGSIGTVISLWN
AKSEEILTITNDDAVFKHPETPMNTEAIAYYRDLCNKIAGRFQEFVASGRPGLSADAFSGKVFVAEDAVSLGLIDDVIPW
VDFPGVV

Sequences:

>Translated_247_residues
MKPLYCEETAWLAKIRQRKSLELKAAGNPDFDFSFFIQTRQKARVIGSSLVIDVIGPLYGDGVPLNEVLGGTNYQSIVKE
IKGAAGNIDEVVFIFDSPGGDVQGCHETAELIKSLPVETVAYVKGMCCSAAYYLASACDQVVVTETALVGSIGTVISLWN
AKSEEILTITNDDAVFKHPETPMNTEAIAYYRDLCNKIAGRFQEFVASGRPGLSADAFSGKVFVAEDAVSLGLIDDVIPW
VDFPGVV
>Mature_247_residues
MKPLYCEETAWLAKIRQRKSLELKAAGNPDFDFSFFIQTRQKARVIGSSLVIDVIGPLYGDGVPLNEVLGGTNYQSIVKE
IKGAAGNIDEVVFIFDSPGGDVQGCHETAELIKSLPVETVAYVKGMCCSAAYYLASACDQVVVTETALVGSIGTVISLWN
AKSEEILTITNDDAVFKHPETPMNTEAIAYYRDLCNKIAGRFQEFVASGRPGLSADAFSGKVFVAEDAVSLGLIDDVIPW
VDFPGVV

Specific function: Multicopy Suppressor Of The Htra (Degp) Null Phenotype. It Is Possibly A Protease, Not Essential For Bacterial VIability. [C]

COG id: COG0616

COG function: function code OU; Periplasmic serine proteases (ClpP class)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 26642; Mature: 26642

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLYCEETAWLAKIRQRKSLELKAAGNPDFDFSFFIQTRQKARVIGSSLVIDVIGPLYG
CCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCC
DGVPLNEVLGGTNYQSIVKEIKGAAGNIDEVVFIFDSPGGDVQGCHETAELIKSLPVETV
CCCCHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHH
AYVKGMCCSAAYYLASACDQVVVTETALVGSIGTVISLWNAKSEEILTITNDDAVFKHPE
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCC
TPMNTEAIAYYRDLCNKIAGRFQEFVASGRPGLSADAFSGKVFVAEDAVSLGLIDDVIPW
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH
VDFPGVV
CCCCCCC
>Mature Secondary Structure
MKPLYCEETAWLAKIRQRKSLELKAAGNPDFDFSFFIQTRQKARVIGSSLVIDVIGPLYG
CCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCC
DGVPLNEVLGGTNYQSIVKEIKGAAGNIDEVVFIFDSPGGDVQGCHETAELIKSLPVETV
CCCCHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHH
AYVKGMCCSAAYYLASACDQVVVTETALVGSIGTVISLWNAKSEEILTITNDDAVFKHPE
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCC
TPMNTEAIAYYRDLCNKIAGRFQEFVASGRPGLSADAFSGKVFVAEDAVSLGLIDDVIPW
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH
VDFPGVV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA