Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735831

Identifier: 187735831

GI number: 187735831

Start: 1614484

End: 1615320

Strand: Direct

Name: 187735831

Synonym: Amuc_1338

Alternate gene names: NA

Gene position: 1614484-1615320 (Clockwise)

Preceding gene: 187735830

Following gene: 187735832

Centisome position: 60.6

GC content: 48.15

Gene sequence:

>837_bases
ATGGCTCTTTCAGATGCTCACAAGATAGTTATTCACAGTGAAGTCATTTCTTCTTTGCGTAAAGCTCTGGCTCCGCTGGA
ATACTTTAAGAAGGATTTCCGAATGGAGTATGCTTCTGAGATTAAATTCAAGAATGTAAAAGCCGCCGGAAATATTACTG
AAAACCCTTCTGATTACCAGACGGATAAAGAAAATGAAGGGGATTTAATCCCCCTGTCACTTACTGAACTCCATCAACCC
TGGCGCATTACGCCCGCCGAAAAGCGGAATGGGTGGAAATTGGCGGATTTGGCAAAAACGAACGCTACGGCGTTTGCCAA
TAACTTGAACAAGCGCATACTTTCCCTTGTTACAGCGGATGGAGCCAAGGTTATCGGTACGGCTGACGCTTTCACAAAGC
GTAAGTGCATCAACCTCAGCGGAGACGTAGAATCCGACGAACCTCGCCTTTTGCTGGCGCCTGATTATTACCGAGCTATT
CTTCCGGAAAATACGACGGAATTCCGGCTTGATGGAGGCGCTTACGGATTTGATTCCATCCATAAGGTCAAGACCTCCGT
CTTTGCTGATAACGTAGTCGGTATTTCCTATGATGGAGGTGCGGTTGCTGTTGGTTCCGCCCTTCCGGAGATCGACGAGG
CTTTCAAGGATGATATCCATTCCGAGGTCATTCAGGTGGAAGGTCTTGCTGGTCTTTCTATCCTGTTTTGCACTTGGCTT
GATTTGAAAACTCGCGCGGAATGGGCTTCTCTGGGCCTGATGTTCGGGGCAAAGATTCTCGAGGCTGACAAGGTGAAAGG
ATACGTTGCCGCTGCTGTTGCGTCAGATGAAGGCTGA

Upstream 100 bases:

>100_bases
GAGGAACAGAGGAAGTTTTATGCTGCTCATAAGGATGAGTTGGCAAAACTTTGCAAGTAATCAATAACAATATTAACGAT
TAAAACCATTTTTTAGAATT

Downstream 100 bases:

>100_bases
TTTTCTTTGTATTCATGCTGGTGTTTACCGTCCCGGATTTGTCCGGGGCGGTTTTTTGTGCAACGCACCGCCATTTGTAT
GAGATTCACAGAGGCTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MALSDAHKIVIHSEVISSLRKALAPLEYFKKDFRMEYASEIKFKNVKAAGNITENPSDYQTDKENEGDLIPLSLTELHQP
WRITPAEKRNGWKLADLAKTNATAFANNLNKRILSLVTADGAKVIGTADAFTKRKCINLSGDVESDEPRLLLAPDYYRAI
LPENTTEFRLDGGAYGFDSIHKVKTSVFADNVVGISYDGGAVAVGSALPEIDEAFKDDIHSEVIQVEGLAGLSILFCTWL
DLKTRAEWASLGLMFGAKILEADKVKGYVAAAVASDEG

Sequences:

>Translated_278_residues
MALSDAHKIVIHSEVISSLRKALAPLEYFKKDFRMEYASEIKFKNVKAAGNITENPSDYQTDKENEGDLIPLSLTELHQP
WRITPAEKRNGWKLADLAKTNATAFANNLNKRILSLVTADGAKVIGTADAFTKRKCINLSGDVESDEPRLLLAPDYYRAI
LPENTTEFRLDGGAYGFDSIHKVKTSVFADNVVGISYDGGAVAVGSALPEIDEAFKDDIHSEVIQVEGLAGLSILFCTWL
DLKTRAEWASLGLMFGAKILEADKVKGYVAAAVASDEG
>Mature_277_residues
ALSDAHKIVIHSEVISSLRKALAPLEYFKKDFRMEYASEIKFKNVKAAGNITENPSDYQTDKENEGDLIPLSLTELHQPW
RITPAEKRNGWKLADLAKTNATAFANNLNKRILSLVTADGAKVIGTADAFTKRKCINLSGDVESDEPRLLLAPDYYRAIL
PENTTEFRLDGGAYGFDSIHKVKTSVFADNVVGISYDGGAVAVGSALPEIDEAFKDDIHSEVIQVEGLAGLSILFCTWLD
LKTRAEWASLGLMFGAKILEADKVKGYVAAAVASDEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30356; Mature: 30224

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSDAHKIVIHSEVISSLRKALAPLEYFKKDFRMEYASEIKFKNVKAAGNITENPSDYQ
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC
TDKENEGDLIPLSLTELHQPWRITPAEKRNGWKLADLAKTNATAFANNLNKRILSLVTAD
CCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHCC
GAKVIGTADAFTKRKCINLSGDVESDEPRLLLAPDYYRAILPENTTEFRLDGGAYGFDSI
CCEEEECCHHHHHHHEECCCCCCCCCCCCEEECCHHHHHHCCCCCCEEEECCCCCCHHHH
HKVKTSVFADNVVGISYDGGAVAVGSALPEIDEAFKDDIHSEVIQVEGLAGLSILFCTWL
HHHHHHHHHCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHH
DLKTRAEWASLGLMFGAKILEADKVKGYVAAAVASDEG
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
>Mature Secondary Structure 
ALSDAHKIVIHSEVISSLRKALAPLEYFKKDFRMEYASEIKFKNVKAAGNITENPSDYQ
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC
TDKENEGDLIPLSLTELHQPWRITPAEKRNGWKLADLAKTNATAFANNLNKRILSLVTAD
CCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHCC
GAKVIGTADAFTKRKCINLSGDVESDEPRLLLAPDYYRAILPENTTEFRLDGGAYGFDSI
CCEEEECCHHHHHHHEECCCCCCCCCCCCEEECCHHHHHHCCCCCCEEEECCCCCCHHHH
HKVKTSVFADNVVGISYDGGAVAVGSALPEIDEAFKDDIHSEVIQVEGLAGLSILFCTWL
HHHHHHHHHCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHH
DLKTRAEWASLGLMFGAKILEADKVKGYVAAAVASDEG
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA