Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735828

Identifier: 187735828

GI number: 187735828

Start: 1611881

End: 1613281

Strand: Direct

Name: 187735828

Synonym: Amuc_1335

Alternate gene names: NA

Gene position: 1611881-1613281 (Clockwise)

Preceding gene: 187735827

Following gene: 187735829

Centisome position: 60.5

GC content: 49.32

Gene sequence:

>1401_bases
ATGAAAGCAGGAAATGTCCAGATTTTGGATCAGTTCGGCCGGCCGTTTTCAAGCCGCCCCATTTACAAGAGCGGCAGTTA
TGATGACGGGCTGCAGCGGCTTCCGAATTATCTCAAAGAACCGGAACAGCTTTCCGGGAACCTTACCCGGAAGAACCTTA
TTTCCGCATCCCGTCTGTTGTACAAAAATAATGGCGTTGTAAAAGGCGCCGTGAACATGAAGGCTGAATACTCTATCGGG
AAAGCGTTTCTGTTCAAATCTCTGTGCAAGAATCCGGAAGTTGCGGCGAAGTATGACGAGTACATCAAGGCGTTTTACAA
AGTTGCATGCGTGAACGGAAAGAATTTTCACTCGCTCCTGTATCTGATCTCCACCGCCATCGACATTGATGGGGATTGCT
TTGTAATGTTGACGGAAAGCAAGACGGGGTTTCCTCAACTGCAATTTATCCGGGCAAACCGTGTTTGCTCTCCTAAAAAT
GGCCTTATTGACTCCGGAAAATATAAGGGATTGAACGTGCTGCACGGCGTCATAACCAATCGCATGGGACGTGAAATCGC
TTATTGGCTGGACGGCGACGAACCAGGGGGAGGTGAAATCATCCCGGCATCCTCAATACTTCATATCGTGGATGACGACT
TTCTTTCCACCTGCCGGGGCGAGCCTCTCTTCTCTCATGGCCTCAAGGAATTCCGATACATTGATGATATCAATACAGCC
GAACTTGGGGCCATGAAGATTGCGTCACAAATTGCCCTGGTAAAAAAGAACGAAACGGGAGAAGTTGACATAACGCAGGC
TTATGACAAACCGTCCAATAATGGGGAGGTGCTCATCCGGAATACTGGTGATAAGCAAATTGTATTTTTGAAGTCTGAAG
ATTCCCTTGACTCCCTGAAGATTGAGCGCCCCTCTCCGAACTACATGAGTTTTTCAGAACGGCTTCTGAAGGGCGTTTTA
TCCGGGGTGGGCGTGCCCTATGATATCGTGGTCAATCCGGACTCAAGCGGCGTTGGGAACAGAATGTCTCTGTCCAAATT
TGACAATACCACGCGAGATCGGGCCACGCTGCTTGAAGATGCTGCCAGACTGCTTGTACAGTATATCTTGGCCGTAGGTA
TCCAGCGGGAGGACATCCCGCACGCGGAAGGCTGGTGGAACATGATGTTCAGCCGCGCCAAGCGTCCAAGCGTAGACATG
GGCCGCGACTCCAACAGCCAGTTGAAAGAGTACAATGCCGGTATTAAAAACCTCACAGAAATCTGTGAGGAAAACGGAAC
GCAGGTTGAGGACCATTTGAGAATACGTGCCAGGGAAGCCGCCATTGCGGAGAAGTTGCGCCGTGAAGCTGAAGCAGAAT
TTGGAGTAGAAATCTCTCCGGATTATATCAGGAAGTTTTAA

Upstream 100 bases:

>100_bases
TGACTATTGATTTATGGGTGGAAGCTTTGGGGATTGCTATTCGTTCTCTTGAGCATGGCCGGTTTGAAGGAGGGAATAAC
GTTGCAAGGATAGTGTTTCG

Downstream 100 bases:

>100_bases
TGTGATGAAACCGTTATATTGTGAAGAAACTGCATGGCTGGCGAAGATTCGCCAGCGGAAGAGCCTGGAACTGAAAGCCG
CAGGGAATCCGGATTTTGAC

Product: Bacteriophage capsid protein-like protein

Products: NA

Alternate protein names: Phage Portal Protein Of Lambda Family; Bacteriophage Capsid Protein-Like Protein; Portal Protein Lambda Family

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MKAGNVQILDQFGRPFSSRPIYKSGSYDDGLQRLPNYLKEPEQLSGNLTRKNLISASRLLYKNNGVVKGAVNMKAEYSIG
KAFLFKSLCKNPEVAAKYDEYIKAFYKVACVNGKNFHSLLYLISTAIDIDGDCFVMLTESKTGFPQLQFIRANRVCSPKN
GLIDSGKYKGLNVLHGVITNRMGREIAYWLDGDEPGGGEIIPASSILHIVDDDFLSTCRGEPLFSHGLKEFRYIDDINTA
ELGAMKIASQIALVKKNETGEVDITQAYDKPSNNGEVLIRNTGDKQIVFLKSEDSLDSLKIERPSPNYMSFSERLLKGVL
SGVGVPYDIVVNPDSSGVGNRMSLSKFDNTTRDRATLLEDAARLLVQYILAVGIQREDIPHAEGWWNMMFSRAKRPSVDM
GRDSNSQLKEYNAGIKNLTEICEENGTQVEDHLRIRAREAAIAEKLRREAEAEFGVEISPDYIRKF

Sequences:

>Translated_466_residues
MKAGNVQILDQFGRPFSSRPIYKSGSYDDGLQRLPNYLKEPEQLSGNLTRKNLISASRLLYKNNGVVKGAVNMKAEYSIG
KAFLFKSLCKNPEVAAKYDEYIKAFYKVACVNGKNFHSLLYLISTAIDIDGDCFVMLTESKTGFPQLQFIRANRVCSPKN
GLIDSGKYKGLNVLHGVITNRMGREIAYWLDGDEPGGGEIIPASSILHIVDDDFLSTCRGEPLFSHGLKEFRYIDDINTA
ELGAMKIASQIALVKKNETGEVDITQAYDKPSNNGEVLIRNTGDKQIVFLKSEDSLDSLKIERPSPNYMSFSERLLKGVL
SGVGVPYDIVVNPDSSGVGNRMSLSKFDNTTRDRATLLEDAARLLVQYILAVGIQREDIPHAEGWWNMMFSRAKRPSVDM
GRDSNSQLKEYNAGIKNLTEICEENGTQVEDHLRIRAREAAIAEKLRREAEAEFGVEISPDYIRKF
>Mature_466_residues
MKAGNVQILDQFGRPFSSRPIYKSGSYDDGLQRLPNYLKEPEQLSGNLTRKNLISASRLLYKNNGVVKGAVNMKAEYSIG
KAFLFKSLCKNPEVAAKYDEYIKAFYKVACVNGKNFHSLLYLISTAIDIDGDCFVMLTESKTGFPQLQFIRANRVCSPKN
GLIDSGKYKGLNVLHGVITNRMGREIAYWLDGDEPGGGEIIPASSILHIVDDDFLSTCRGEPLFSHGLKEFRYIDDINTA
ELGAMKIASQIALVKKNETGEVDITQAYDKPSNNGEVLIRNTGDKQIVFLKSEDSLDSLKIERPSPNYMSFSERLLKGVL
SGVGVPYDIVVNPDSSGVGNRMSLSKFDNTTRDRATLLEDAARLLVQYILAVGIQREDIPHAEGWWNMMFSRAKRPSVDM
GRDSNSQLKEYNAGIKNLTEICEENGTQVEDHLRIRAREAAIAEKLRREAEAEFGVEISPDYIRKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52069; Mature: 52069

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAGNVQILDQFGRPFSSRPIYKSGSYDDGLQRLPNYLKEPEQLSGNLTRKNLISASRLL
CCCCCEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHH
YKNNGVVKGAVNMKAEYSIGKAFLFKSLCKNPEVAAKYDEYIKAFYKVACVNGKNFHSLL
CCCCCEEEEEECCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
YLISTAIDIDGDCFVMLTESKTGFPQLQFIRANRVCSPKNGLIDSGKYKGLNVLHGVITN
HHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
RMGREIAYWLDGDEPGGGEIIPASSILHIVDDDFLSTCRGEPLFSHGLKEFRYIDDINTA
HCCCEEEEEECCCCCCCCCEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH
ELGAMKIASQIALVKKNETGEVDITQAYDKPSNNGEVLIRNTGDKQIVFLKSEDSLDSLK
HHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCCCEE
IERPSPNYMSFSERLLKGVLSGVGVPYDIVVNPDSSGVGNRMSLSKFDNTTRDRATLLED
EECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHH
AARLLVQYILAVGIQREDIPHAEGWWNMMFSRAKRPSVDMGRDSNSQLKEYNAGIKNLTE
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHH
ICEENGTQVEDHLRIRAREAAIAEKLRREAEAEFGVEISPDYIRKF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHCC
>Mature Secondary Structure
MKAGNVQILDQFGRPFSSRPIYKSGSYDDGLQRLPNYLKEPEQLSGNLTRKNLISASRLL
CCCCCEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHH
YKNNGVVKGAVNMKAEYSIGKAFLFKSLCKNPEVAAKYDEYIKAFYKVACVNGKNFHSLL
CCCCCEEEEEECCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
YLISTAIDIDGDCFVMLTESKTGFPQLQFIRANRVCSPKNGLIDSGKYKGLNVLHGVITN
HHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
RMGREIAYWLDGDEPGGGEIIPASSILHIVDDDFLSTCRGEPLFSHGLKEFRYIDDINTA
HCCCEEEEEECCCCCCCCCEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH
ELGAMKIASQIALVKKNETGEVDITQAYDKPSNNGEVLIRNTGDKQIVFLKSEDSLDSLK
HHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCCCEE
IERPSPNYMSFSERLLKGVLSGVGVPYDIVVNPDSSGVGNRMSLSKFDNTTRDRATLLED
EECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHH
AARLLVQYILAVGIQREDIPHAEGWWNMMFSRAKRPSVDMGRDSNSQLKEYNAGIKNLTE
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHH
ICEENGTQVEDHLRIRAREAAIAEKLRREAEAEFGVEISPDYIRKF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA