Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735810
Identifier: 187735810
GI number: 187735810
Start: 1596195
End: 1596515
Strand: Reverse
Name: 187735810
Synonym: Amuc_1317
Alternate gene names: NA
Gene position: 1596515-1596195 (Counterclockwise)
Preceding gene: 187735811
Following gene: 187735809
Centisome position: 59.93
GC content: 56.7
Gene sequence:
>321_bases ATGACAGACAACGTAACCAACTTCCTCGCCTCCGGCATCGAAATCAAGGGAACCATCCGTTTCCAGAATGACATGCACAT CGACGGCAAAATCGAAGGCGAAATCATCTCCGACAAGGGAAAAGTCACCATCGGTGAAACCGCTCAAATCAAGGGAGACA TCACTGCCGGAGACGTCCGCATCTACGGCAACGTGGAAGGCAAGGTCACCTCTGACCGCTGCGAACTCAAGCAGCAGGCC CGTGTCGTCGGGGACATGAAGACACGCAGCCTCGCCATGGAGGAAGGCGCCCACCTGCTGGGCCGCACGGAAATCGGCTA A
Upstream 100 bases:
>100_bases GAAGCTGACGGACAAATACGTGAAGGAGATTGACGAACTGGTGGCCGTCAAGGAAAAGGATATCATGACCATTTAACCCA TCCCCAACCATTTTACGACA
Downstream 100 bases:
>100_bases AAAACAGCCGCCCCTGTTCTTCCCTGGCGTGCCTGCCTTGTACGGGCCGCTTCTCCAAAAGCGTAAAAGCGCGCCGGGGT TTCTCAGGGGGCGGCGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTDNVTNFLASGIEIKGTIRFQNDMHIDGKIEGEIISDKGKVTIGETAQIKGDITAGDVRIYGNVEGKVTSDRCELKQQA RVVGDMKTRSLAMEEGAHLLGRTEIG
Sequences:
>Translated_106_residues MTDNVTNFLASGIEIKGTIRFQNDMHIDGKIEGEIISDKGKVTIGETAQIKGDITAGDVRIYGNVEGKVTSDRCELKQQA RVVGDMKTRSLAMEEGAHLLGRTEIG >Mature_105_residues TDNVTNFLASGIEIKGTIRFQNDMHIDGKIEGEIISDKGKVTIGETAQIKGDITAGDVRIYGNVEGKVTSDRCELKQQAR VVGDMKTRSLAMEEGAHLLGRTEIG
Specific function: Unknown
COG id: COG1664
COG function: function code M; Integral membrane protein CcmA involved in cell shape determination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11493; Mature: 11362
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNVTNFLASGIEIKGTIRFQNDMHIDGKIEGEIISDKGKVTIGETAQIKGDITAGDVR CCCCHHHHHHCCEEEEEEEEECCCEEECCEECCEEECCCCCEEECCCEEEECCEEECCEE IYGNVEGKVTSDRCELKQQARVVGDMKTRSLAMEEGAHLLGRTEIG EEECCCCEEECHHHHHHHHHHHHCCCCHHHEEHHCCCEEEEECCCC >Mature Secondary Structure TDNVTNFLASGIEIKGTIRFQNDMHIDGKIEGEIISDKGKVTIGETAQIKGDITAGDVR CCCHHHHHHCCEEEEEEEEECCCEEECCEECCEEECCCCCEEECCCEEEECCEEECCEE IYGNVEGKVTSDRCELKQQARVVGDMKTRSLAMEEGAHLLGRTEIG EEECCCCEEECHHHHHHHHHHHHCCCCHHHEEHHCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA