Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735810

Identifier: 187735810

GI number: 187735810

Start: 1596195

End: 1596515

Strand: Reverse

Name: 187735810

Synonym: Amuc_1317

Alternate gene names: NA

Gene position: 1596515-1596195 (Counterclockwise)

Preceding gene: 187735811

Following gene: 187735809

Centisome position: 59.93

GC content: 56.7

Gene sequence:

>321_bases
ATGACAGACAACGTAACCAACTTCCTCGCCTCCGGCATCGAAATCAAGGGAACCATCCGTTTCCAGAATGACATGCACAT
CGACGGCAAAATCGAAGGCGAAATCATCTCCGACAAGGGAAAAGTCACCATCGGTGAAACCGCTCAAATCAAGGGAGACA
TCACTGCCGGAGACGTCCGCATCTACGGCAACGTGGAAGGCAAGGTCACCTCTGACCGCTGCGAACTCAAGCAGCAGGCC
CGTGTCGTCGGGGACATGAAGACACGCAGCCTCGCCATGGAGGAAGGCGCCCACCTGCTGGGCCGCACGGAAATCGGCTA
A

Upstream 100 bases:

>100_bases
GAAGCTGACGGACAAATACGTGAAGGAGATTGACGAACTGGTGGCCGTCAAGGAAAAGGATATCATGACCATTTAACCCA
TCCCCAACCATTTTACGACA

Downstream 100 bases:

>100_bases
AAAACAGCCGCCCCTGTTCTTCCCTGGCGTGCCTGCCTTGTACGGGCCGCTTCTCCAAAAGCGTAAAAGCGCGCCGGGGT
TTCTCAGGGGGCGGCGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MTDNVTNFLASGIEIKGTIRFQNDMHIDGKIEGEIISDKGKVTIGETAQIKGDITAGDVRIYGNVEGKVTSDRCELKQQA
RVVGDMKTRSLAMEEGAHLLGRTEIG

Sequences:

>Translated_106_residues
MTDNVTNFLASGIEIKGTIRFQNDMHIDGKIEGEIISDKGKVTIGETAQIKGDITAGDVRIYGNVEGKVTSDRCELKQQA
RVVGDMKTRSLAMEEGAHLLGRTEIG
>Mature_105_residues
TDNVTNFLASGIEIKGTIRFQNDMHIDGKIEGEIISDKGKVTIGETAQIKGDITAGDVRIYGNVEGKVTSDRCELKQQAR
VVGDMKTRSLAMEEGAHLLGRTEIG

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11493; Mature: 11362

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNVTNFLASGIEIKGTIRFQNDMHIDGKIEGEIISDKGKVTIGETAQIKGDITAGDVR
CCCCHHHHHHCCEEEEEEEEECCCEEECCEECCEEECCCCCEEECCCEEEECCEEECCEE
IYGNVEGKVTSDRCELKQQARVVGDMKTRSLAMEEGAHLLGRTEIG
EEECCCCEEECHHHHHHHHHHHHCCCCHHHEEHHCCCEEEEECCCC
>Mature Secondary Structure 
TDNVTNFLASGIEIKGTIRFQNDMHIDGKIEGEIISDKGKVTIGETAQIKGDITAGDVR
CCCHHHHHHCCEEEEEEEEECCCEEECCEECCEEECCCCCEEECCCEEEECCEEECCEE
IYGNVEGKVTSDRCELKQQARVVGDMKTRSLAMEEGAHLLGRTEIG
EEECCCCEEECHHHHHHHHHHHHCCCCHHHEEHHCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA